FFCP PHASE1:Hg19::chr12:88813089..88813098,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:88813089..88813098,- | |||
|coexpression_cluster_id=C2247 | |||
|description=CAGE_peak_at_chr12:88813089..88813098,- | |||
|id=chr12:88813089..88813098,- | |||
|ontology_enrichment_celltype=CL:0000055!1.56e-31!180;CL:0000057!6.31e-31!75;CL:0002620!9.80e-26!23;CL:0000048!1.46e-12!430;CL:0000723!5.92e-12!436;CL:0000034!3.57e-11!444;CL:0000187!8.57e-10!54;CL:0000680!1.12e-09!57;CL:0000056!1.12e-09!57;CL:0000355!1.12e-09!57;CL:0000188!3.62e-09!9;CL:0000393!9.30e-09!60;CL:0000211!9.30e-09!60;CL:0000183!2.54e-08!59;CL:0002551!4.78e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0002620;3.33e-35;23!CL:0000188;1.19e-13;9!CL:0000594;5.14e-12;3!CL:0002551;3.00e-09;6!CL:0000057;4.31e-09;73!CL:0002561;6.29e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.40e-35,23;CL:0000057,1.69e-18,76;CL:0000188,9.18e-14,9;CL:0000594,4.40e-12,3;CL:0002551,2.86e-09,6;CL:0002561,6.21e-08,2;CL:0002559,8.66e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!8.51e-08!5;DOID:450!8.51e-08!5;DOID:66!8.51e-08!5;DOID:423!8.51e-08!5;DOID:0080000!8.51e-08!5;DOID:11722!8.51e-08!5 | |||
|ontology_enrichment_disease_v019=DOID:17;1.16e-11;5!DOID:450;1.16e-11;5!DOID:66;1.16e-11;5!DOID:423;1.16e-11;5!DOID:0080000;1.16e-11;5!DOID:11722;1.16e-11;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,7.72e-12,5;DOID:450,7.72e-12,5;DOID:66,7.72e-12,5;DOID:423,7.72e-12,5;DOID:0080000,7.72e-12,5;DOID:11722,7.72e-12,5 | |||
|ontology_enrichment_uberon=UBERON:0002199!1.37e-18!45;UBERON:0002416!1.37e-18!45;UBERON:0002097!2.53e-17!40;UBERON:0000914!1.15e-14!83;UBERON:0002329!1.15e-14!83;UBERON:0003077!1.15e-14!83;UBERON:0003059!1.15e-14!83;UBERON:0007282!1.15e-14!83;UBERON:0009618!1.15e-14!83;UBERON:0007285!1.15e-14!83;UBERON:0003102!5.04e-14!95;UBERON:0004290!1.45e-12!70;UBERON:0000486!4.25e-10!82;UBERON:0002385!1.01e-08!63;UBERON:0001015!1.01e-08!63;UBERON:0000383!1.01e-08!63;UBERON:0001134!1.57e-08!61;UBERON:0002036!1.57e-08!61;UBERON:0003082!1.57e-08!61;UBERON:0002067!7.53e-07!9;UBERON:0004016!7.53e-07!9;UBERON:0010083!7.53e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;4.22e-23;41!UBERON:0002199;1.98e-18;46!UBERON:0002416;1.98e-18;46!UBERON:0003102;9.11e-14;50!UBERON:0002067;3.39e-09;9!UBERON:0005933;6.29e-08;2!UBERON:0005942;6.29e-08;2!UBERON:0005932;6.29e-08;2!UBERON:0001134;2.26e-07;16!UBERON:0002036;2.26e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,2.22e-29,41;UBERON:0002199,2.30e-28,46;UBERON:0002416,2.30e-28,46;UBERON:0003102,1.17e-15,99;UBERON:0002067,2.70e-09,9;UBERON:0004016,2.70e-09,9;UBERON:0010083,2.70e-09,9;UBERON:0002329,8.65e-09,71;UBERON:0003059,8.65e-09,71;UBERON:0007282,8.65e-09,71;UBERON:0004290,8.65e-09,71;UBERON:0009618,8.65e-09,71;UBERON:0003077,1.29e-08,72;UBERON:0007285,1.29e-08,72;UBERON:0007524,1.89e-08,73;UBERON:0000486,4.81e-08,83;UBERON:0005933,6.21e-08,2;UBERON:0005942,6.21e-08,2;UBERON:0005932,6.21e-08,2;UBERON:0007503,1.11e-07,78;UBERON:0002073,8.66e-07,5;UBERON:0005086,8.66e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,1.26343974685366,0,0,0,0,0,0.123766352960047,0.331397375727916,2.01697543935533,0.602694528023977,0.730310090387373,1.95173119516203,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0,0.50133791063589,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,3.57504788195691,1.43418310374407,0.354668382198357,0,0,0,1.55605517699883,0.269421344139376,0.163461903113459,0,0.576175924479999,0.937285727335186,2.80944069147288,1.1409436430889,1.49448680551801,0.352303495931295,1.29498355494505,0.702254033511242,3.26646674007829,0.122834317311768,1.13658359293342,0,0.494533858557114,0,0,0.505008341862199,0.250237039743928,2.21651292387346,0,0,0.751190294532984,0.113432183160021,1.97328599257748,1.2813443329114,4.66250182551036,0.900273288253207,3.40073346486848,1.03056216018252,1.67505170698431,3.71307930930786,0.974370051611986,3.28163906517349,4.23429533754577,0.646584227275248,3.19508633264953,1.91428986632517,0.67824236924195,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,1.39310378409594,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651616610620649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.80672114403045,0,0,0,0,0,0.257207374262142,0,0,0,0,0,2.93162565864362,0,0,0.602878754119172,0,0,0,0,0,0,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0.828831026872071,0,0.500170521059677,0.271265023699736,0.207970861530807,0.356857977594324,0.473107245101804,0,0,0,0,0,0.184369168541703,3.73599542212756,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0.771048469013278,0.355123450626254,0.574890092096664,1.03850885836724,0.116210378459959,0,0,0,0.114814448164607,0.364182336013434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0.386682873168488,1.54048617114644,1.22802939780904,1.37836572484531,5.80069322288678,3.77043404176994,2.30111894023472,0.267096106940212,0,0,0,0,0,0.62962469366128,0,0.308033580176089,0,0,0,0,0.372158369359667,2.53103539774981,0,0.255897791311334,0,0.318203247925937,0,0,0,0,0.404364963146632,0,0.842516912477962,0,4.38684281336312,0,0,0.282810863907425,1.13008116620243,0,0,0.438450885253763,0,0,0,0.30982349809975,0,0,0,0,0.709522128141196,0,1.31717957183961,0.379473173765715,0,0,0,0,0,0,0,0,0,1.52234282769651,0.764637207142375,0,0,0.411362273086194,0.648473311192717,1.08006287447623,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23087398947712,0,0,0,0,0,0.606802608747567,0.111443384277478,0,0,0,0,0,0,1.66963057534359,0,0,0,0,0,0,0,2.48831670129446,0,0,0,0,2.3948309234694,1.11136990144637,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.794682894901893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0.397429223405979,0,0,0,0.213452994739353,0,0,0,0,0,0.124252535565433,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25426853765475,1.08599920350743,0.864221491201268,2.28611152076586,1.19730191562487,0.656740165994712,5.62280471891892,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0.298509605773748,0.233713309847224,2.21922344601045,1.32582103692562,1.0062716070103,0.889811221596536,3.66144109435078,0.453692771289717,0.15543720058278,0.443565449968902,0,0.899606224327209,0.621051827505038,0,0.53168342911599,0,0,1.14241563650639,0.813741466409323,0.545545977607678,0.214821114084977,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0.463044948647668,0,0,0,0,0.706756583783524,0,0.337884881306145,0,0,0,0,0,0,0,0,0.737318726261158,0,0,0,0.172214979660816,1.70254786070051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0.0675375846183947,0.781078098613847,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06498800657509,1.36341447614652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743990036333503,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:88813089..88813098,- | |||
}} |
Latest revision as of 13:12, 24 July 2015
Short description: | p@chr12:88813089..88813098, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:88813089..88813098, - |
Coexpression cluster: | C2247_liposarcoma_Fibroblast_Smooth_Skeletal_Mesenchymal_Pancreatic_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.40e-35 | 23 |
fibroblast | 1.69e-18 | 76 |
cell of skeletal muscle | 9.18e-14 | 9 |
skeletal muscle satellite cell | 4.40e-12 | 3 |
fibroblast of dermis | 2.86e-09 | 6 |
outer root sheath cell | 6.21e-08 | 2 |
hair follicle cell | 8.66e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
skin of body | 2.22e-29 | 41 |
integument | 2.30e-28 | 46 |
integumental system | 2.30e-28 | 46 |
surface structure | 1.17e-15 | 99 |
dermis | 2.70e-09 | 9 |
dermatome | 2.70e-09 | 9 |
future dermis | 2.70e-09 | 9 |
somite | 8.65e-09 | 71 |
presomitic mesoderm | 8.65e-09 | 71 |
presumptive segmental plate | 8.65e-09 | 71 |
dermomyotome | 8.65e-09 | 71 |
trunk paraxial mesoderm | 8.65e-09 | 71 |
paraxial mesoderm | 1.29e-08 | 72 |
presumptive paraxial mesoderm | 1.29e-08 | 72 |
dense mesenchyme tissue | 1.89e-08 | 73 |
multilaminar epithelium | 4.81e-08 | 83 |
hair root sheath | 6.21e-08 | 2 |
hair outer root sheath | 6.21e-08 | 2 |
bulb of hair follicle | 6.21e-08 | 2 |
epithelial vesicle | 1.11e-07 | 78 |
hair follicle | 8.66e-07 | 5 |
hair follicle placode | 8.66e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 7.72e-12 | 5 |
myotonic disease | 7.72e-12 | 5 |
muscle tissue disease | 7.72e-12 | 5 |
myopathy | 7.72e-12 | 5 |
muscular disease | 7.72e-12 | 5 |
myotonic dystrophy | 7.72e-12 | 5 |