FFCP PHASE1:Hg19::chr12:91451645..91451650,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11081 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6309 | |||
|TSSclassifier=strong | |||
|UniProt=O60938 | |||
|association_with_transcript=109bp_to_ENST00000266719_5end | |||
|cluster_id=chr12:91451645..91451650,- | |||
|coexpression_cluster_id=C112 | |||
|description=CAGE_peak_8_at_KERA_5end | |||
|id=chr12:91451645..91451650,- | |||
|ontology_enrichment_celltype=CL:0000214!2.19e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000214;1.03e-17;3!CL:0000153;8.61e-07;9!CL:0000447;8.61e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000214,1.12e-17,3;CL:0000153,8.85e-07,9;CL:0000447,8.85e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001723!7.02e-25!3;UBERON:0001033!7.02e-25!3;UBERON:0010056!7.02e-25!3;UBERON:0002426!1.88e-19!1;UBERON:0003831!1.88e-19!1;UBERON:0003898!1.88e-19!1;UBERON:0004830!1.88e-19!1;UBERON:0001774!1.88e-19!1;UBERON:0003830!1.88e-19!1;UBERON:0005175!1.88e-19!1;UBERON:0003897!1.88e-19!1;UBERON:0001103!1.88e-19!1;UBERON:0010084!1.88e-19!1;UBERON:0003127!1.72e-10!2;UBERON:0001630!2.07e-10!2;UBERON:0005090!2.07e-10!2;UBERON:0000341!2.99e-10!2;UBERON:0001042!3.76e-08!10;UBERON:0009145!3.76e-08!10;UBERON:0000020!1.16e-07!23;UBERON:0006562!1.73e-07!11;UBERON:0006915!2.19e-07!3;UBERON:0002018!2.19e-07!3;UBERON:0002217!2.19e-07!3;UBERON:0007616!2.19e-07!3;UBERON:0001032!2.30e-07!24;UBERON:0004456!2.30e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;8.10e-26;2!UBERON:0006915;1.03e-17;3!UBERON:0007616;1.03e-17;3!UBERON:0002217;1.03e-17;3!UBERON:0002018;1.03e-17;3!UBERON:0000945;2.66e-11;5!UBERON:0010039;2.66e-11;5!UBERON:0003126;2.26e-08;7!UBERON:0001005;2.26e-08;7!UBERON:0004905;1.75e-07;8!UBERON:0000982;1.75e-07;8!UBERON:0004770;1.75e-07;8!UBERON:0004457;8.61e-07;9!UBERON:0000042;8.61e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,7.14e-26,2;UBERON:0006915,1.12e-17,3;UBERON:0007616,1.12e-17,3;UBERON:0002217,1.12e-17,3;UBERON:0002018,1.12e-17,3;UBERON:0003126,2.18e-08,7;UBERON:0001005,2.18e-08,7;UBERON:0000945,1.49e-07,8;UBERON:0010039,1.49e-07,8;UBERON:0004905,1.80e-07,8;UBERON:0000982,1.80e-07,8;UBERON:0004770,1.80e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677942222341597,0,0,0,0,0,0,0,0,3.6651710773093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3196288626764,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10440093535229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0,0.435433495793923,0.684466602170562,0,0,1.33064142618405,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p8@KERA | |||
}} |
Latest revision as of 20:49, 15 September 2015
Short description: | p8@KERA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_KERA_5end |
Coexpression cluster: | C112_gastric_pancreas_temporal_duodenum_small_extraskeletal_adrenal |
Association with transcript: | 109bp_to_ENST00000266719_5end |
EntrezGene: | KERA |
HGNC: | 6309 |
UniProt: | O60938 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
synovial cell | 1.12e-17 | 3 |
GAG secreting cell | 8.85e-07 | 9 |
carbohydrate secreting cell | 8.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 7.14e-26 | 2 |
stratified squamous epithelium | 1.12e-17 | 3 |
layer of synovial tissue | 1.12e-17 | 3 |
synovial joint | 1.12e-17 | 3 |
synovial membrane of synovial joint | 1.12e-17 | 3 |
trachea | 2.18e-08 | 7 |
respiratory airway | 2.18e-08 | 7 |
stomach | 1.49e-07 | 8 |
food storage organ | 1.49e-07 | 8 |
articulation | 1.80e-07 | 8 |
skeletal joint | 1.80e-07 | 8 |
articular system | 1.80e-07 | 8 |