FFCP PHASE1:Hg19::chr12:9800888..9800901,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=374443 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=190bp_to_uc009zgr.1_5end | |||
|cluster_id=chr12:9800888..9800901,+ | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_10_at_LOC374443_5end | |||
|id=chr12:9800888..9800901,+ | |||
|ontology_enrichment_celltype=CL:0000542!2.72e-21!53;CL:0000051!2.72e-21!53;CL:0000838!8.96e-21!52;CL:0000738!5.87e-20!140;CL:0000084!6.06e-20!25;CL:0000827!6.06e-20!25;CL:0000037!1.73e-19!172;CL:0000566!1.73e-19!172;CL:0000988!3.86e-19!182;CL:0000791!5.32e-17!18;CL:0000789!5.32e-17!18;CL:0002420!5.32e-17!18;CL:0002419!5.32e-17!18;CL:0000790!5.32e-17!18;CL:0002032!1.30e-16!165;CL:0000837!1.30e-16!165;CL:0002087!5.40e-16!119;CL:0002031!2.73e-13!124;CL:0000625!3.56e-11!11;CL:0000624!5.02e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.35e-51;18!CL:0000789;1.35e-51;18!CL:0002419;1.35e-51;18!CL:0000084;3.77e-40;25!CL:0000625;1.89e-35;11!CL:0000624;5.52e-21;6!CL:0000542;5.07e-17;53!CL:0000898;1.69e-11;3!CL:0000226;7.93e-11;3!CL:0000842;7.93e-11;3!CL:0000623;3.71e-10;3!CL:0000815;3.43e-08;2!CL:0000792;3.43e-08;2!CL:0002677;3.43e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.06e-52,18;CL:0000789,5.06e-52,18;CL:0002420,5.06e-52,18;CL:0002419,5.06e-52,18;CL:0000790,5.06e-52,18;CL:0000084,2.35e-40,25;CL:0000827,2.35e-40,25;CL:0000625,7.52e-36,11;CL:0000838,3.12e-31,52;CL:0000542,1.60e-30,53;CL:0000051,1.60e-30,53;CL:0000624,4.93e-21,6;CL:0000738,6.48e-18,136;CL:0002087,9.43e-17,115;CL:0000037,5.64e-13,168;CL:0002031,5.39e-12,120;CL:0000988,6.47e-12,177;CL:0000898,1.43e-11,3;CL:0000226,1.09e-10,3;CL:0000842,1.09e-10,3;CL:0000623,2.92e-10,3;CL:0000825,2.92e-10,3;CL:0002032,5.65e-09,161;CL:0000837,5.65e-09,161;CL:0000815,2.94e-08,2;CL:0000792,2.94e-08,2;CL:0002677,2.94e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000790;1.35e-51;18!CL:0000051;5.07e-17;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.30e-08!15;UBERON:0000179!1.30e-08!15;UBERON:0000463!1.30e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.28e-15;15!UBERON:0000179;1.28e-15;15!UBERON:0000463;1.28e-15;15!UBERON:0002390;2.82e-09;32!UBERON:0002370;2.05e-07;2!UBERON:0005058;2.05e-07;2!UBERON:0009113;2.05e-07;2!UBERON:0002193;8.25e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.78e-15,15;UBERON:0000179,1.78e-15,15;UBERON:0000463,1.78e-15,15;UBERON:0002370,2.96e-08,4;UBERON:0005058,2.96e-08,4;UBERON:0009113,2.96e-08,4;UBERON:0003295,2.96e-08,4;UBERON:0005562,2.96e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0.204000691244253,0,0,0.273748850145768,0.376627918784408,0,0,0,1.18009283054671,0.767658796194425,0.464448369948228,0,0,0,0.232401601740905,0,0.880801318004542,0.553995408531877,0.401088894940283,1.08505435357926,0.223915474239924,0.647787332037959,0,0.290796477559129,0,0.485168122375632,0,0.411167888021826,0,0,0,0,0.344745680736619,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0.368277635987565,0,0,0,0.209658645508376,0.22465726229299,0.150176892841506,0.32145117339416,0.285012743741249,0,0.365328307529268,0,0.546138611262131,1.77901850772711,0.853460445133014,0.800791974072025,0.574752439954483,0.661044872784862,1.90810750907073,1.70763890732835,0,0,0,0,1.05353633910031,4.52432471261816,4.32311839024081,3.08402248499264,3.00935691703221,4.56291173287027,8.99550830895993,3.89653456815823,2.45103005147382,5.59751224202191,5.31681347000691,5.41607727530031,1.79327847615945,2.60118695119756,2.13769275984779,1.93445012450094,2.60822777161547,7.26604159494096,10.9691739516782,7.31748666634838,2.26618685395132,5.3650869104269,4.46715679127419,5.06039384039006,8.28270077242652,6.51083453856419,1.90090408889675,1.95747654801105,1.53583933385302,4.99722906209383,5.20909954496837,4.10563998460523,2.82249440514625,2.94184215361858,4.48955652036677,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.351339142772504,0.130979075497713,0,0,0,0,0.26591592103773,0.953962497221368,1.14398982156026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250237039743928,0.277064115484183,0,0,0,0.113432183160021,0,0,0.211931901159562,0,0,0.257640540045629,0,0,0,0.252433774244115,0.0920498986422993,0,0,0.10075209822764,0,0,0,0.573609190778008,0.121973706129595,0,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20731549707325,0.122988438543114,0,0,0,0,0.0925884451585296,0.325808305310325,0,0,0,0,0,0,0,0,0,0.492434012174795,0,0.297262324577456,0,0,0,0.179117045405697,0.290633938513962,0,0,0,0.207328115540772,0.720599767084807,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,1.2162378064119,0,0,0,0,0,0,0,0,0.336255431980582,2.95546140302891,1.72502059887614,1.41177339907723,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0.173767228936166,0,0,2.06768026122887,3.45142721309787,2.13455115606889,0,0,0.30239029332968,0,0.153461973288062,0,0,0,0.321707842287215,0,0.154209693802656,0,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0.784349769176855,0,0,0,0.170093705276516,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0.650060246036521,0,0.096670718292122,0.154048617114644,0,0,0.214840489736547,0.290033387828457,0.0852266274161009,0,0,0,0.638063562472921,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0,0,0,0,0.329294892959902,0,0.699869440489966,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,1.01489521846434,1.52927441428475,1.70894156152249,1.90585420366231,0.822724546172388,0,1.08006287447623,1.58625035258854,0,0,0,0.371606350251437,0.144269212976445,0.640276590135727,0.478278818186467,0.399158742865633,0.191505370132367,0.211673582723883,0,0,0.228234679033192,0.626719583092093,0,0.338583555603207,0.1605880751037,0.403599414382095,0.851692475380653,0,0,0.223676107892416,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0,0.445773537109913,0,0.23874448473769,0,0,0,0,0.779160935160341,0.16480387422676,0.211125408127993,0,0.276283915531148,0,0,0.123084805461069,0,0.179736702294654,0,0,0.295930216910801,0,0,0.969332746095218,0,0,0,0,0,0.1137934482855,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0.307801034015188,0.113942055847001,0,0,0.217294743844016,0,0,0,1.02193298195737,0.156980256395025,0,0.225595660617181,0.19606253431774,0.167821586975843,0,0,0.210998064528027,0,0,0,0.995261931078505,0.176915129006678,0,0.296521128680622,0.617819694732514,0.313265848516366,0,0,0.234264445725339,0.547364367646998,0,0,0,0,0,0.252746318513952,0,0.103688191397247,0,0,0,1.19472429772959,0,0,0,0,0.0870592065804026,0.17472666824203,0,0,0.0730893170861856,0.0821154570532092,0.290967049465258,0,0,0.137041924646751,0,0,0,0.160317640503067,0.213452994739353,0,0,0,0,0,0.124252535565433,0,0,0,0.305994652908965,0.288950589901519,0,0,0,0.429765441419957,0.262887354279314,0,0,0,0,0,0,0.134366944973453,0,0,0.0787831823072236,0,0,0.0984274815147488,0,0.795229689809303,0,0,0.137539436597234,0,0,0.77380195455795,0,0.335434687599266,0.0788057072991982,0.367182116944987,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0.13223260174269,0,0,0.320362237703084,0,0.414239055347196,0.992332043623902,0.197611631897944,0.365377795142688,0,0,0.2506898940227,0,0,0,0,0,0,0,0.221858103073705,0.0620964029413835,0.276697269872462,0,0.15164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| |||
|short_description=p10@LOC374443 | |||
}} |
Latest revision as of 05:21, 16 September 2015
Short description: | p10@LOC374443 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_LOC374443_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 190bp_to_uc009zgr.1_5end |
EntrezGene: | LOC374443 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 5.06e-52 | 18 |
alpha-beta T cell | 5.06e-52 | 18 |
immature T cell | 5.06e-52 | 18 |
mature T cell | 5.06e-52 | 18 |
immature alpha-beta T cell | 5.06e-52 | 18 |
T cell | 2.35e-40 | 25 |
pro-T cell | 2.35e-40 | 25 |
CD8-positive, alpha-beta T cell | 7.52e-36 | 11 |
lymphoid lineage restricted progenitor cell | 3.12e-31 | 52 |
lymphocyte | 1.60e-30 | 53 |
common lymphoid progenitor | 1.60e-30 | 53 |
CD4-positive, alpha-beta T cell | 4.93e-21 | 6 |
leukocyte | 6.48e-18 | 136 |
nongranular leukocyte | 9.43e-17 | 115 |
hematopoietic stem cell | 5.64e-13 | 168 |
hematopoietic lineage restricted progenitor cell | 5.39e-12 | 120 |
hematopoietic cell | 6.47e-12 | 177 |
naive T cell | 1.43e-11 | 3 |
single nucleate cell | 1.09e-10 | 3 |
mononuclear cell | 1.09e-10 | 3 |
natural killer cell | 2.92e-10 | 3 |
pro-NK cell | 2.92e-10 | 3 |
hematopoietic oligopotent progenitor cell | 5.65e-09 | 161 |
hematopoietic multipotent progenitor cell | 5.65e-09 | 161 |
regulatory T cell | 2.94e-08 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.94e-08 | 2 |
naive regulatory T cell | 2.94e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 1.78e-15 | 15 |
haemolymphatic fluid | 1.78e-15 | 15 |
organism substance | 1.78e-15 | 15 |
thymus | 2.96e-08 | 4 |
hemolymphoid system gland | 2.96e-08 | 4 |
thymic region | 2.96e-08 | 4 |
pharyngeal gland | 2.96e-08 | 4 |
thymus primordium | 2.96e-08 | 4 |