FFCP PHASE1:Hg19::chr13:38153407..38153451,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:38153407..38153451,- | |||
|coexpression_cluster_id=C349 | |||
|description=CAGE_peak_at_chr13:38153407..38153451,- | |||
|id=chr13:38153407..38153451,- | |||
|ontology_enrichment_celltype=CL:0000055!5.30e-27!180;CL:0000680!4.20e-16!57;CL:0000056!4.20e-16!57;CL:0000355!4.20e-16!57;CL:0000057!2.38e-15!75;CL:0000187!2.02e-14!54;CL:0000183!4.09e-12!59;CL:0000393!1.05e-11!60;CL:0000211!1.05e-11!60;CL:0002334!5.91e-10!12;CL:0000048!2.01e-09!430;CL:0000723!2.10e-09!436;CL:0000222!2.51e-09!119;CL:0000192!2.78e-09!42;CL:0000514!2.78e-09!42;CL:0000034!8.08e-09!444;CL:0000359!1.19e-08!32;CL:0002494!2.50e-08!16 | |||
|ontology_enrichment_celltype_v019=CL:0002334;3.20e-14;12!CL:0000187;1.55e-08;55!CL:0000134;9.91e-08;55!CL:1000306;4.00e-07;4!CL:0002547;4.00e-07;4!CL:0000393;4.59e-07;61!CL:0000211;4.59e-07;61!CL:0000723;7.93e-07;61!CL:0002570;9.46e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.16e-14,76;CL:0002334,2.89e-14,12;CL:0000680,1.14e-13,58;CL:0000056,1.14e-13,58;CL:0000355,1.14e-13,58;CL:0000048,5.52e-13,427;CL:0000723,7.12e-13,433;CL:0000187,1.89e-12,55;CL:0000034,4.00e-12,441;CL:0000393,1.91e-10,61;CL:0000211,1.91e-10,61;CL:0000222,8.63e-08,121;CL:0000192,1.24e-07,43;CL:0000514,1.24e-07,43;CL:1000306,3.98e-07,4;CL:0002547,3.98e-07,4;CL:0002570,8.33e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000355;1.97e-08;58 | |||
|ontology_enrichment_disease=DOID:2394!8.13e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;3.41e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.88e-11,14 | |||
|ontology_enrichment_uberon=UBERON:0001134!4.83e-17!61;UBERON:0002036!4.83e-17!61;UBERON:0003082!4.83e-17!61;UBERON:0002385!5.15e-16!63;UBERON:0001015!5.15e-16!63;UBERON:0000383!5.15e-16!63;UBERON:0000914!8.43e-14!83;UBERON:0002329!8.43e-14!83;UBERON:0003077!8.43e-14!83;UBERON:0003059!8.43e-14!83;UBERON:0007282!8.43e-14!83;UBERON:0009618!8.43e-14!83;UBERON:0007285!8.43e-14!83;UBERON:0004290!6.16e-13!70;UBERON:0004872!1.20e-12!84;UBERON:0001637!1.33e-11!42;UBERON:0003509!1.33e-11!42;UBERON:0004572!1.33e-11!42;UBERON:0000486!1.42e-09!82;UBERON:0000490!2.54e-09!138;UBERON:0004535!4.75e-09!110;UBERON:0001981!6.27e-09!60;UBERON:0007500!6.27e-09!60;UBERON:0004537!6.27e-09!60;UBERON:0006965!6.27e-09!60;UBERON:0005256!1.04e-08!143;UBERON:0004573!1.72e-08!33;UBERON:0004571!1.72e-08!33;UBERON:0001009!2.06e-08!113;UBERON:0002049!2.20e-08!79;UBERON:0007798!2.20e-08!79;UBERON:0000948!1.03e-07!24;UBERON:0005498!1.03e-07!24;UBERON:0004140!1.03e-07!24;UBERON:0009881!1.03e-07!24;UBERON:0004141!1.03e-07!24;UBERON:0003084!1.03e-07!24;UBERON:0007005!1.03e-07!24;UBERON:0004139!1.03e-07!24;UBERON:0004291!1.03e-07!24;UBERON:0000055!2.03e-07!69;UBERON:0002100!3.91e-07!216;UBERON:0003914!5.39e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;6.27e-09;31!UBERON:0001015;6.27e-09;31!UBERON:0000383;6.27e-09;31!UBERON:0004797;4.00e-07;4!UBERON:0000415;4.00e-07;4!UBERON:0007240;4.00e-07;4!UBERON:0005742;4.00e-07;4!UBERON:0005734;4.00e-07;4!UBERON:0004664;4.00e-07;4!UBERON:0004663;4.00e-07;4!UBERON:0001637;6.13e-07;42!UBERON:0003509;6.13e-07;42!UBERON:0004572;6.13e-07;42!UBERON:0004573;8.94e-07;33!UBERON:0004571;8.94e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,2.15e-14,62;UBERON:0002036,2.15e-14,62;UBERON:0003082,2.15e-14,62;UBERON:0002385,1.19e-13,64;UBERON:0001015,1.19e-13,64;UBERON:0000383,1.19e-13,64;UBERON:0007524,6.53e-12,73;UBERON:0002329,2.12e-11,71;UBERON:0003059,2.12e-11,71;UBERON:0007282,2.12e-11,71;UBERON:0004290,2.12e-11,71;UBERON:0009618,2.12e-11,71;UBERON:0003077,4.07e-11,72;UBERON:0007285,4.07e-11,72;UBERON:0007503,1.37e-09,78;UBERON:0001637,1.16e-08,42;UBERON:0003509,1.16e-08,42;UBERON:0004572,1.16e-08,42;UBERON:0000486,1.66e-08,83;UBERON:0004573,1.15e-07,33;UBERON:0004571,1.15e-07,33;UBERON:0004872,2.36e-07,83;UBERON:0000415,3.98e-07,4;UBERON:0007240,3.98e-07,4;UBERON:0005742,3.98e-07,4;UBERON:0005734,3.98e-07,4;UBERON:0004664,3.98e-07,4;UBERON:0004663,3.98e-07,4 | |||
|phase1_expression=1.99846217197612,1.71280419112787,1.40954404095971,3.00219895059391,0.893922188854576,2.61701557230111,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,1.34465029290355,2.41077811209591,0.730310090387373,1.95173119516203,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,7.37770945674,2.42938867502708,1.0843174571537,4.01070328508712,1.30361867064741,1.5905718941022,2.43317435151318,0,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35599548967925,0.550236083880135,0.417989933073621,0,0,0,0,0,0,0,2.43042584364528,0.0892997282840798,0,0,0,0,0.183201743930407,0,0,0,25.3455695364612,5.82500353657067,7.28250494472703,22.3732564184075,10.6400514659507,0,3.20246987189115,13.0733800661095,0.933633106199299,4.17603083416033,7.68270944633256,0.454072282934794,4.60940739583999,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0.494533858557114,0,0,0.168336113954066,0.125118519871964,0,0,1.83892677479412,0.150238058906597,11.6835148654822,0.717558542755448,4.91181994282705,4.23863802319124,3.00091096084402,0.92747276314595,3.34932702059318,2.60563598864226,0.168776332241266,0.389748020644795,3.5340728394176,2.39329736469978,0.161646056818812,5.32514388774922,0.906768884048762,0.339121184620975,0.193260853163297,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.343135620597051,1.09750285408626,0,0.100528972411631,0,0,0,0,0,1.29149563659404,0.144366447761074,0,0.380508304469197,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,6.07577064061555,0,5.917119267892,2.92531928243358,2.08014873822732,0,0,0,2.14466990487221,0,0.823240336780769,2.93162565864362,0.710783897485092,0,27.7324226894819,13.0730018790044,59.7838487268701,0,0,0,11.7416179190875,4.59447743336456,0,5.06734573336527,0.410952645100767,3.22309733831812,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,12.2702808303176,19.0919018012963,3.6271555457805,0.35142424497814,1.50473049863859,11.3703752027992,0,3.32112799267718,0.737476674166813,0.260650843404249,0,0,0,0,0,0,0,0,23.5702417427838,8.90079445070762,23.014127743512,10.5074102389675,5.11707249066703,26.5408969886952,0,3.23840356985577,9.76589489222199,1.88892458831761,4.67328986265259,4.29978400301849,0,0.40101294060657,0,3.78887678943202,4.91646153618136,2.49136388422906,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0.574265537996172,0.650060246036521,3.21367859688319,1.7400729292582,0.924291702687866,1.22802939780904,0.413509717453592,1.07420244868274,1.16013355131383,1.53407929348982,9.70449188549437,1.32227932288782,0.768760269460425,0,0,0,7.55549632393536,0,0.308033580176089,1.59691809095107,0,2.40921484835096,2.00374841438788,0,2.21465597303108,1.14378116354295,0,0,0.318203247925937,0.78494864019923,1.43897966066652,6.58888871366531,2.35624804691373,0.606547444719948,1.58510321173008,0,0,4.87426979262569,0,2.18399858252777,27.574059230974,0,1.65409603063837,1.99031692572366,2.19225442626881,0,0,1.82619339266434,0.30982349809975,0.281695602532241,0.430234056612155,0,1.07001315444375,0,0,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0.47748896947538,0,0,0,0,0,0,0,0.398495976502139,0.552567831062295,0,0,0,14.618860620105,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,1.13942055847001,0,0,0,0,0.274792780205587,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,1.60515529459758,0,0,0,0,0,3.62972148145992,0,0.31593289814244,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.34945333648406,0,0,0,0,0,0.0882561266915003,0.677942222341597,0,0,0,0,0,0,0,0,0,0,0,0,0,0.815425236441684,0.313808538937,0,0,0,0,0,0,0,1.67569440763353,0.458320848023367,0,0,0,0,0.268733889946905,3.24269895188163,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0.681552087141687,0,0,0,0,0,0,0,0.320362237703084,0.314408610199332,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,5.14169281663894,8.3220879225392,1.13641803165053,1.76097531226803,0.889811221596536,2.97492088916001,0.302461847526478,0.932623203496683,0.295710299979268,0.63718706865481,2.24901556081802,2.17368139626763,4.14706207840855,19.9381285918496,11.4783913598581,7.51288044986092,33.8916638830228,4.88244879845594,1.45478927362048,4.94088562395447,0,11.9428766609585,2.00013882331577,11.675453976215,14.8169775057004,0,0,0,0,17.6830621899572,0,3.18157715858408,1.96997725189636,0,3.94711289241673,0,0.192914038270915,0,0,0,0,0,0,0,0,2.94848863961771,1.96618327002975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31410006502863,0,0,13.7543618039367,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,1.90691047733584,0,0,0.225630985047772,0.40341013740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| |||
|short_description=p@chr13:38153407..38153451,- | |||
}} |
Latest revision as of 15:53, 24 July 2015
Short description: | p@chr13:38153407..38153451, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:38153407..38153451, - |
Coexpression cluster: | C349_Mesothelial_Fibroblast_Preadipocyte_Ewing_mesenchymal_Skeletal_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.16e-14 | 76 |
preadipocyte | 2.89e-14 | 12 |
muscle precursor cell | 1.14e-13 | 58 |
myoblast | 1.14e-13 | 58 |
multi-potent skeletal muscle stem cell | 1.14e-13 | 58 |
multi fate stem cell | 5.52e-13 | 427 |
somatic stem cell | 7.12e-13 | 433 |
muscle cell | 1.89e-12 | 55 |
stem cell | 4.00e-12 | 441 |
electrically responsive cell | 1.91e-10 | 61 |
electrically active cell | 1.91e-10 | 61 |
mesodermal cell | 8.63e-08 | 121 |
smooth muscle cell | 1.24e-07 | 43 |
smooth muscle myoblast | 1.24e-07 | 43 |
fibroblast of tunica adventitia of artery | 3.98e-07 | 4 |
fibroblast of the aortic adventitia | 3.98e-07 | 4 |
mesenchymal stem cell of adipose | 8.33e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 2.15e-14 | 62 |
striated muscle tissue | 2.15e-14 | 62 |
myotome | 2.15e-14 | 62 |
muscle tissue | 1.19e-13 | 64 |
musculature | 1.19e-13 | 64 |
musculature of body | 1.19e-13 | 64 |
dense mesenchyme tissue | 6.53e-12 | 73 |
somite | 2.12e-11 | 71 |
presomitic mesoderm | 2.12e-11 | 71 |
presumptive segmental plate | 2.12e-11 | 71 |
dermomyotome | 2.12e-11 | 71 |
trunk paraxial mesoderm | 2.12e-11 | 71 |
paraxial mesoderm | 4.07e-11 | 72 |
presumptive paraxial mesoderm | 4.07e-11 | 72 |
epithelial vesicle | 1.37e-09 | 78 |
artery | 1.16e-08 | 42 |
arterial blood vessel | 1.16e-08 | 42 |
arterial system | 1.16e-08 | 42 |
multilaminar epithelium | 1.66e-08 | 83 |
systemic artery | 1.15e-07 | 33 |
systemic arterial system | 1.15e-07 | 33 |
splanchnic layer of lateral plate mesoderm | 2.36e-07 | 83 |
artery wall | 3.98e-07 | 4 |
tunica adventitia of artery | 3.98e-07 | 4 |
adventitia | 3.98e-07 | 4 |
tunica adventitia of blood vessel | 3.98e-07 | 4 |
aorta tunica adventitia | 3.98e-07 | 4 |
aorta wall | 3.98e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.88e-11 | 14 |