FFCP PHASE1:Hg19::chr13:38160359..38160428,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:38160359..38160428,- | |||
|coexpression_cluster_id=C349 | |||
|description=CAGE_peak_at_chr13:38160359..38160428,- | |||
|id=chr13:38160359..38160428,- | |||
|ontology_enrichment_celltype=CL:0000055!6.47e-29!180;CL:0000057!6.29e-18!75;CL:0000680!8.70e-17!57;CL:0000056!8.70e-17!57;CL:0000355!8.70e-17!57;CL:0000187!5.18e-15!54;CL:0000183!9.69e-13!59;CL:0000393!2.45e-12!60;CL:0000211!2.45e-12!60;CL:0002334!2.70e-12!12;CL:0000192!2.14e-09!42;CL:0000514!2.14e-09!42;CL:0000048!2.99e-09!430;CL:0000723!4.94e-09!436;CL:0000222!6.26e-09!119;CL:0002494!1.17e-08!16;CL:0000034!1.48e-08!444;CL:0000359!1.56e-08!32;CL:0002548!2.17e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002334;6.90e-16;12!CL:0002548;2.60e-12;6!CL:1000306;3.46e-08;4!CL:0002547;3.46e-08;4!CL:0002580;1.34e-07;3!CL:0002494;3.01e-07;16!CL:0000057;5.11e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.26e-19,76;CL:0002334,6.35e-16,12;CL:0002548,2.96e-12,6;CL:1000306,3.95e-08,4;CL:0002547,3.95e-08,4;CL:0002580,1.21e-07,3;CL:0002494,3.43e-07,16;CL:0000048,6.39e-07,427 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.08e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;9.23e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.00e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0001134!2.58e-17!61;UBERON:0002036!2.58e-17!61;UBERON:0003082!2.58e-17!61;UBERON:0002385!2.53e-16!63;UBERON:0001015!2.53e-16!63;UBERON:0000383!2.53e-16!63;UBERON:0004290!3.38e-14!70;UBERON:0000914!7.29e-14!83;UBERON:0002329!7.29e-14!83;UBERON:0003077!7.29e-14!83;UBERON:0003059!7.29e-14!83;UBERON:0007282!7.29e-14!83;UBERON:0009618!7.29e-14!83;UBERON:0007285!7.29e-14!83;UBERON:0001637!1.31e-11!42;UBERON:0003509!1.31e-11!42;UBERON:0004572!1.31e-11!42;UBERON:0000486!2.03e-11!82;UBERON:0004872!6.97e-11!84;UBERON:0004573!7.07e-09!33;UBERON:0004571!7.07e-09!33;UBERON:0000948!1.22e-08!24;UBERON:0005498!1.22e-08!24;UBERON:0004140!1.22e-08!24;UBERON:0009881!1.22e-08!24;UBERON:0004141!1.22e-08!24;UBERON:0003084!1.22e-08!24;UBERON:0007005!1.22e-08!24;UBERON:0004139!1.22e-08!24;UBERON:0004291!1.22e-08!24;UBERON:0007100!5.04e-08!27;UBERON:0004535!7.64e-08!110;UBERON:0000490!8.26e-08!138;UBERON:0001009!9.02e-08!113;UBERON:0001981!1.08e-07!60;UBERON:0007500!1.08e-07!60;UBERON:0004537!1.08e-07!60;UBERON:0006965!1.08e-07!60;UBERON:0005256!1.66e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;3.46e-08;4!UBERON:0000415;3.46e-08;4!UBERON:0007240;3.46e-08;4!UBERON:0005742;3.46e-08;4!UBERON:0005734;3.46e-08;4!UBERON:0004664;3.46e-08;4!UBERON:0004663;3.46e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,3.95e-08,4;UBERON:0007240,3.95e-08,4;UBERON:0005742,3.95e-08,4;UBERON:0005734,3.95e-08,4;UBERON:0004664,3.95e-08,4;UBERON:0004663,3.95e-08,4;UBERON:0000948,5.43e-08,24;UBERON:0005498,5.43e-08,24;UBERON:0004140,5.43e-08,24;UBERON:0009881,5.43e-08,24;UBERON:0004141,5.43e-08,24;UBERON:0003084,5.43e-08,24;UBERON:0007005,5.43e-08,24;UBERON:0004139,5.43e-08,24;UBERON:0004291,5.43e-08,24;UBERON:0007100,7.79e-07,27 | |||
|phase1_expression=0.908391896352783,1.49870366723688,0.845726424575827,0,0.893922188854576,0,0,0,0,0,0,0,0,0,0.331397375727916,1.34465029290355,0.602694528023977,0.730310090387373,1.46379839637152,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.0664806419773,2.01210257911091,0.895037932904712,0.361439152384566,1.50401373190767,0.144846518960824,3.9764297352555,1.94653948121054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13061588384802,0.838998872419812,0.275118041940067,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,27.8304292949378,1.2663051166458,2.51577443545116,6.3104056564739,1.41867352879343,2.24271040056923,3.20246987189115,2.22000793575444,2.17847724779836,4.98429486657846,5.39424280274414,0.151357427644931,1.15235184896,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0.247266929278557,0,0,0,0,0,1.31693286264251,1.22595118319608,0.300476117813194,4.76415169272088,0.89694817844431,1.92201649936711,1.90738711043606,0.900273288253207,0.618315175430633,0.515281080091258,0.930584281657949,0.506328996723799,0.68205903612839,1.7670364197088,1.38074847963449,0,1.06502877754984,0.806016785821122,0.508681776931463,0,0.272746120590835,0,0,0,0.116193942869518,0,0,0,0,0.643240938192885,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.768251997860379,0,0,0,0,0,0,0,0.587043471179108,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42198887333556,0,3.381211010224,0.797814349754612,2.08014873822732,0,0,0,0.714889968290738,0,0,0.65147236858747,0.355391948742546,0,11.1532569512047,6.10073421020206,15.0959216684906,0,0,0,1.91699884393266,1.14861935834114,0,0.723906533337896,0.61642896765115,2.14873155887875,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,11.0224556611328,11.062597305424,3.15404830067869,0.585707074963566,0.300946099727719,11.3703752027992,0,0.664225598535437,0.737476674166813,0.0868836144680828,0,0,0,0,0,0,0,0,12.4053903909388,6.90578879796281,5.89386198309454,5.25370511948374,0.511707249066704,8.36440389946759,1.48418066444991,0.616838775210622,4.43904313282818,1.72467027628999,2.07701771673448,2.20799719073923,0,0,0,0.918515585316854,0.910455840033585,0.262248829918848,0,0,0,0,0,0,0,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0,0,0.574265537996172,0.650060246036521,0,0.870036464629098,0.616194468458578,0.921022048356777,0.275673144969061,0.214840489736547,0.435050081742686,0.681813019328807,5.07482603186403,0.330569830721956,0.384380134730212,0,0,0.929691098594572,2.51849877464512,0,0.308033580176089,0.532306030317022,0,1.29726953372744,3.14874750832381,0,1.2655176988749,0.38126038784765,0,0.42793898803392,0,0.78494864019923,0.359744915166629,2.74537029736055,0.942499218765491,0.606547444719948,0,0.421258456238981,0,1.94970791705028,0,1.63799893689583,8.48432591722277,1.13008116620243,0,0.66343897524122,0.876901770507525,0,0,0.405820753925408,0.30982349809975,0,0,0,1.07001315444375,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.84287092855976,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341826167541004,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,0,2.4441205797345,0,0,0,0,1.60515529459758,0,0,0,0,0,2.41981432097328,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,1.39641200636127,0,0,0,0.429226048136571,0,0.335917362433631,2.88239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427149650270779,0.78602152549833,0.828478110694391,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0.934853239388898,3.88364103051829,0.378806010550178,0.251567901752575,0,0.457680136793847,0,0.15543720058278,0,0,0.899606224327209,1.08684069813382,1.24411862352257,5.58267600571789,6.26094074174081,1.35231848097497,15.6130136989206,1.62748293281865,0.727394636810238,1.39633724155235,0,1.99047944349308,0.400027764663154,5.15093557774189,9.42898568544573,0,0,0,0,13.8290614562486,0,1.71315693154527,0.537266523244462,0,0.877136198314828,0,0.578742114812744,0,0,0,0,0,0,0,0,0.327609848846413,0.737318726261158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.9921914287504,0,0,9.87492642333915,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90691047733584,0,0,0,0.20170506870352,0,0,0.655087670040387,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,1.54339208493677,0,0,0,0,0,0,0,1.82631744101899,0,0,0,0,10.9266939846038,0,0,0.207216164163037,1.0243108625637,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0,15.0775876073966,5.82853191670967,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,12.5746064868985,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,0,10.7878555268358,0.924351257262837,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| |||
|short_description=p@chr13:38160359..38160428,- | |||
}} |
Latest revision as of 15:53, 24 July 2015
Short description: | p@chr13:38160359..38160428, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:38160359..38160428, - |
Coexpression cluster: | C349_Mesothelial_Fibroblast_Preadipocyte_Ewing_mesenchymal_Skeletal_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.26e-19 | 76 |
preadipocyte | 6.35e-16 | 12 |
cardiac fibroblast | 2.96e-12 | 6 |
fibroblast of tunica adventitia of artery | 3.95e-08 | 4 |
fibroblast of the aortic adventitia | 3.95e-08 | 4 |
preadipocyte of the breast | 1.21e-07 | 3 |
cardiocyte | 3.43e-07 | 16 |
multi fate stem cell | 6.39e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
artery wall | 3.95e-08 | 4 |
tunica adventitia of artery | 3.95e-08 | 4 |
adventitia | 3.95e-08 | 4 |
tunica adventitia of blood vessel | 3.95e-08 | 4 |
aorta tunica adventitia | 3.95e-08 | 4 |
aorta wall | 3.95e-08 | 4 |
heart | 5.43e-08 | 24 |
primitive heart tube | 5.43e-08 | 24 |
primary heart field | 5.43e-08 | 24 |
anterior lateral plate mesoderm | 5.43e-08 | 24 |
heart tube | 5.43e-08 | 24 |
heart primordium | 5.43e-08 | 24 |
cardiac mesoderm | 5.43e-08 | 24 |
cardiogenic plate | 5.43e-08 | 24 |
heart rudiment | 5.43e-08 | 24 |
primary circulatory organ | 7.79e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.00e-09 | 14 |