FFCP PHASE1:Hg19::chr17:15587602..15587636,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10626 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17241 | |||
|TSSclassifier=strong | |||
|UniProt=B3KP96 | |||
|association_with_transcript=0bp_to_ENST00000416464,uc002goy.2_5end | |||
|cluster_id=chr17:15587602..15587636,- | |||
|description=CAGE_peak_1_at_TRIM16_5end | |||
|id=chr17:15587602..15587636,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.14e-16!94;UBERON:0001016!2.14e-16!94;UBERON:0005743!3.04e-15!86;UBERON:0001017!1.37e-14!82;UBERON:0000924!7.21e-13!173;UBERON:0006601!7.21e-13!173;UBERON:0000955!1.88e-12!69;UBERON:0006238!1.88e-12!69;UBERON:0002346!2.57e-12!90;UBERON:0003056!1.37e-11!61;UBERON:0004121!1.59e-11!169;UBERON:0003075!9.38e-11!86;UBERON:0007284!9.38e-11!86;UBERON:0001049!1.25e-10!57;UBERON:0005068!1.25e-10!57;UBERON:0006241!1.25e-10!57;UBERON:0007135!1.25e-10!57;UBERON:0002791!3.47e-10!33;UBERON:0001893!4.50e-10!34;UBERON:0002780!5.69e-10!41;UBERON:0001890!5.69e-10!41;UBERON:0006240!5.69e-10!41;UBERON:0003080!7.48e-10!42;UBERON:0002020!1.41e-09!34;UBERON:0003528!1.41e-09!34;UBERON:0002616!1.63e-09!59;UBERON:0001869!1.83e-09!32;UBERON:0000033!2.65e-09!123;UBERON:0000153!3.20e-09!129;UBERON:0007811!3.20e-09!129;UBERON:0000475!2.79e-08!365;UBERON:0000064!2.39e-07!219;UBERON:0000956!2.44e-07!25;UBERON:0000203!2.44e-07!25;UBERON:0002619!5.16e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002791;5.16e-09;32!UBERON:0001869;1.35e-08;32!UBERON:0001893;1.39e-08;34!UBERON:0003528;2.22e-08;34!UBERON:0002020;2.22e-08;34!UBERON:0002780;1.50e-07;41!UBERON:0001890;1.50e-07;41!UBERON:0000956;6.15e-07;25!UBERON:0000203;6.15e-07;25!UBERON:0000955;6.83e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.75e-16,89;UBERON:0001017,7.16e-15,81;UBERON:0000955,1.02e-12,68;UBERON:0006238,1.02e-12,68;UBERON:0002346,2.75e-12,86;UBERON:0004121,7.81e-12,171;UBERON:0000924,7.81e-12,171;UBERON:0006601,7.81e-12,171;UBERON:0003056,7.86e-12,61;UBERON:0001049,6.86e-11,56;UBERON:0005068,6.86e-11,56;UBERON:0006241,6.86e-11,56;UBERON:0007135,6.86e-11,56;UBERON:0003075,1.07e-10,82;UBERON:0007284,1.07e-10,82;UBERON:0000073,1.87e-10,53;UBERON:0002616,1.87e-10,53;UBERON:0001893,3.87e-10,34;UBERON:0002780,4.89e-10,41;UBERON:0001890,4.89e-10,41;UBERON:0003080,4.89e-10,41;UBERON:0006240,4.89e-10,41;UBERON:0002791,5.20e-10,32;UBERON:0003528,1.22e-09,34;UBERON:0002020,1.22e-09,34;UBERON:0001869,1.59e-09,32;UBERON:0011216,3.33e-08,223;UBERON:0000956,2.20e-07,25;UBERON:0000203,2.20e-07,25;UBERON:0002619,4.67e-07,22;UBERON:0010371,9.25e-07,104 | |||
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| |||
|short_description=p1@TRIM16 | |||
}} |
Latest revision as of 18:50, 18 September 2015
Short description: | p1@TRIM16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TRIM16_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000416464, uc002goy.2_5end |
EntrezGene: | TRIM16 |
HGNC: | 17241 |
UniProt: | B3KP96 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 6.75e-16 | 89 |
central nervous system | 7.16e-15 | 81 |
brain | 1.02e-12 | 68 |
future brain | 1.02e-12 | 68 |
neurectoderm | 2.75e-12 | 86 |
ectoderm-derived structure | 7.81e-12 | 171 |
ectoderm | 7.81e-12 | 171 |
presumptive ectoderm | 7.81e-12 | 171 |
pre-chordal neural plate | 7.86e-12 | 61 |
neural tube | 6.86e-11 | 56 |
neural rod | 6.86e-11 | 56 |
future spinal cord | 6.86e-11 | 56 |
neural keel | 6.86e-11 | 56 |
neural plate | 1.07e-10 | 82 |
presumptive neural plate | 1.07e-10 | 82 |
regional part of nervous system | 1.87e-10 | 53 |
regional part of brain | 1.87e-10 | 53 |
telencephalon | 3.87e-10 | 34 |
regional part of forebrain | 4.89e-10 | 41 |
forebrain | 4.89e-10 | 41 |
anterior neural tube | 4.89e-10 | 41 |
future forebrain | 4.89e-10 | 41 |
regional part of telencephalon | 5.20e-10 | 32 |
brain grey matter | 1.22e-09 | 34 |
gray matter | 1.22e-09 | 34 |
cerebral hemisphere | 1.59e-09 | 32 |
organ system subdivision | 3.33e-08 | 223 |
cerebral cortex | 2.20e-07 | 25 |
pallium | 2.20e-07 | 25 |
regional part of cerebral cortex | 4.67e-07 | 22 |
ecto-epithelium | 9.25e-07 | 104 |