FFCP PHASE1:Hg19::chr17:46669606..46669628,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=404266 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-25bp_to_NR_033203_5end | |||
|cluster_id=chr17:46669606..46669628,+ | |||
|description=CAGE_peak_1_at_LOC404266_5end | |||
|id=chr17:46669606..46669628,+ | |||
|ontology_enrichment_celltype=CL:0002334!2.92e-14!12;CL:0000055!4.67e-10!180;CL:0000183!5.96e-09!59;CL:0000136!2.22e-08!15;CL:0000187!5.00e-08!54;CL:0000680!3.06e-07!57;CL:0000056!3.06e-07!57;CL:0000355!3.06e-07!57;CL:0000393!3.73e-07!60;CL:0000211!3.73e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0002334;4.57e-16;12!CL:0002582;5.20e-09;3!CL:0002615;1.95e-08;3!CL:0002600;6.16e-07;2!CL:0002598;7.07e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,5.71e-16,12;CL:0002582,4.71e-09,3;CL:0002615,2.59e-08,3;CL:0000136,1.75e-07,15;CL:0000057,2.80e-07,76;CL:0002600,6.10e-07,2;CL:0002598,7.01e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006241;9.75e-09;3!UBERON:0003057;9.75e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!1.07e-14!216;UBERON:0009569!1.31e-10!113;UBERON:0004290!7.47e-09!70;UBERON:0000475!8.68e-09!365;UBERON:0005256!1.17e-08!143;UBERON:0003688!2.05e-08!6;UBERON:0002358!2.05e-08!6;UBERON:0003684!2.05e-08!6;UBERON:0001178!2.05e-08!6;UBERON:0000914!2.46e-07!83;UBERON:0002329!2.46e-07!83;UBERON:0003077!2.46e-07!83;UBERON:0003059!2.46e-07!83;UBERON:0007282!2.46e-07!83;UBERON:0009618!2.46e-07!83;UBERON:0007285!2.46e-07!83;UBERON:0002385!2.57e-07!63;UBERON:0001015!2.57e-07!63;UBERON:0000383!2.57e-07!63;UBERON:0005177!3.69e-07!107;UBERON:0001134!4.95e-07!61;UBERON:0002036!4.95e-07!61;UBERON:0003082!4.95e-07!61;UBERON:0002417!6.63e-07!61;UBERON:0000916!6.63e-07!61;UBERON:0003104!7.37e-07!238;UBERON:0009142!7.37e-07!238;UBERON:0001135!8.92e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;4.64e-11;6!UBERON:0002358;4.64e-11;6!UBERON:0003684;4.64e-11;6!UBERON:0001178;4.64e-11;6!UBERON:0006947;9.63e-09;3!UBERON:0004054;9.63e-09;3!UBERON:0002240;9.75e-09;3!UBERON:0005174;9.75e-09;3!UBERON:0001137;9.75e-09;3!UBERON:0002072;1.35e-08;5!UBERON:0004457;3.20e-07;9!UBERON:0000042;3.20e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,5.96e-11,6;UBERON:0002358,5.96e-11,6;UBERON:0003684,5.96e-11,6;UBERON:0001178,5.96e-11,6;UBERON:0006947,7.76e-09,3;UBERON:0004054,7.76e-09,3;UBERON:0002240,1.03e-08,3;UBERON:0005174,1.03e-08,3;UBERON:0001137,1.03e-08,3;UBERON:0002100,1.52e-08,199;UBERON:0002072,1.83e-08,5;UBERON:0005256,2.97e-08,122;UBERON:0009569,9.67e-08,112;UBERON:0002329,2.65e-07,71;UBERON:0003059,2.65e-07,71;UBERON:0007282,2.65e-07,71;UBERON:0004290,2.65e-07,71;UBERON:0009618,2.65e-07,71;UBERON:0003104,2.91e-07,160;UBERON:0009142,2.91e-07,160;UBERON:0007503,3.45e-07,78;UBERON:0003077,3.83e-07,72;UBERON:0007285,3.83e-07,72;UBERON:0007524,5.47e-07,73 | |||
|phase1_expression=0,0.428201047781966,5.49722175974288,2.00146596706261,1.34088328328186,0,2.53299878168311,0,6.26845507679612,0.982935746006035,0,0,0,0.37129905888014,0.662794751455832,0,0.602694528023977,0,0.487932798790507,0.61560529038394,7.14002419354885,1.88072832886853,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,1.11332214173056,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0.794455084879313,0.286836620748814,1.41867352879343,0,0,0,0,0,0,0,0,0,0,0,5.38015249986484,0.469737994575059,1.45685649931318,1.82586048712923,0,0,0,0,0,1.82032272387605,2.15585442544872,0,0,0,0,0,0,0.567160915800105,0,0,0,0,0.103052529238439,0,0,0.337552664482532,2.72823614451356,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,1.28648187638577,0,3.25057549622385,5.0531563716871,0,0,0,0,0,0,0,0,0,3.69077727312324,1.40241773803446,1.2347220339942,10.2906097969879,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,1.41849132023278,0,2.43062589218851,0,0,0,1.42156779497018,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.49076596687656,2.00068208423871,1.62759014219841,0,0,0,0,0.300946099727719,0,0,0,0,0,0.391602314925481,1.02943027143257,0,0,0,0,0,0,0.496215615637554,0.306923946576125,1.40330047216537,5.76626171650654,3.07024349440022,0.804269605718038,1.48418066444991,2.00472601943452,1.24293207719189,3.69572202062141,3.11552657510173,5.46188778761808,0,0,0,0,0,0.262248829918848,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,3.08454505380579,0,0,0.254876273045038,0,0.447749509444357,0,0,0,0,0,1.03041011647722,0,0,0,0,0,0.48335359146061,1.69453478826109,1.84204409671355,0.275673144969061,0,0.145016693914229,0.0852266274161009,0.178064071293475,0,0,0,0.10115778085555,10.2266020845403,1.88887408098384,4.8792608911242,0,0,1.73986598415015,0,0,0,0.949138274156178,3.0500831027812,8.95642269589669,6.84702380854273,0,0,1.2591072030832,0.54907405947211,0.824686816419805,0.202182481573316,0,0,0,0,0,0,0,4.52032466480971,1.10273068709225,0,0,11.5755106853338,7.21484227251296,0,0,0,0.143411352204052,0.0982490410131212,0,0,0,0,0,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0.50787533340481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,1.41532103205343,0.611030144933625,0,0,0,0,0.802577647298789,0,0,0,0,3.15667522279512,4.83962864194656,0,0,0,0,0,0,0,0,0,0.416024019039416,0,0,0,3.66926003308263,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0.114536596165916,0.343189995723929,0,0.124252535565433,0,0,0.523014231561666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,2.44297692627514,0.681909645754975,0.422401346077626,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,1.38823636338003,1.41483874589699,1.65695622138878,0,0,0,0,0,0.2506898940227,0.612691153526923,0.655745261419609,0,0,0,0,0,0,1.55241007353459,0,0,0,0,0,0,0,0.597019211547496,0,3.32883516901568,0,0,0,0,2.7221566277383,0,0,0.63718706865481,0,0,0.829412415681711,5.0509925766019,0.521745061811734,0.150257608997218,1.52322084867518,0,0,0,0,0,0.800055529326307,1.71697852591396,1.6837474438296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40171224485641,0,1.2249819094128,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0.0887023701626388,0,0,0.135939465953663,0,0,0,0.235479278551542,0,0,1.82631744101899,0,0,0,0,0,0,0,0,0,0,0,0,0,2.9637093513365,0,0.31020638566432,0,0,0.196300467230486,0,0,0,0,1.45713297917742,0.467878926924211,0,0,0,0,0.150962843566674,1.15761237161917,0.218559560503957,0,0,2.59244201811789,5.10402014498858,2.0793248022896,2.5359343655004,0,0.281951753939561,0.580120991762195,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0.126698501011437,0,0,0,0,0.151557396436479,0,0,0,0.213233981900981,0.714193294391221,0,0,0,0.12729431655633,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0.665756774185513,0.402547587182052,0 | |||
|short_description=p1@LOC404266 | |||
}} |
Latest revision as of 07:06, 25 September 2015
Short description: | p1@LOC404266 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC404266_5end |
Coexpression cluster: | NA |
Association with transcript: | -25bp_to_NR_033203_5end |
EntrezGene: | LOC404266 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 5.71e-16 | 12 |
visceral preadipocyte | 4.71e-09 | 3 |
adipocyte of omentum tissue | 2.59e-08 | 3 |
fat cell | 1.75e-07 | 15 |
fibroblast | 2.80e-07 | 76 |
smooth muscle cell of trachea | 6.10e-07 | 2 |
bronchial smooth muscle cell | 7.01e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
omentum | 5.96e-11 | 6 |
peritoneum | 5.96e-11 | 6 |
abdominal cavity | 5.96e-11 | 6 |
visceral peritoneum | 5.96e-11 | 6 |
male genital duct | 7.76e-09 | 3 |
internal male genitalia | 7.76e-09 | 3 |
spinal cord | 1.03e-08 | 3 |
dorsal region element | 1.03e-08 | 3 |
dorsum | 1.03e-08 | 3 |
trunk | 1.52e-08 | 199 |
hypodermis | 1.83e-08 | 5 |
trunk mesenchyme | 2.97e-08 | 122 |
subdivision of trunk | 9.67e-08 | 112 |
somite | 2.65e-07 | 71 |
presomitic mesoderm | 2.65e-07 | 71 |
presumptive segmental plate | 2.65e-07 | 71 |
dermomyotome | 2.65e-07 | 71 |
trunk paraxial mesoderm | 2.65e-07 | 71 |
mesenchyme | 2.91e-07 | 160 |
entire embryonic mesenchyme | 2.91e-07 | 160 |
epithelial vesicle | 3.45e-07 | 78 |
paraxial mesoderm | 3.83e-07 | 72 |
presumptive paraxial mesoderm | 3.83e-07 | 72 |
dense mesenchyme tissue | 5.47e-07 | 73 |