FFCP PHASE1:Hg19::chr17:78234625..78234683,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57674 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14539 | |||
|TSSclassifier=strong | |||
|UniProt=Q9HCF4,D6RI12,C9JCP4 | |||
|association_with_transcript=0bp_to_ENST00000319921,ENST00000456466,ENST00000508628,ENST00000558564,NM_020914,NM_020954,uc002jye.1,uc002jyf.2_5end | |||
|cluster_id=chr17:78234625..78234683,+ | |||
|description=CAGE_peak_1_at_RNF213_5end | |||
|id=chr17:78234625..78234683,+ | |||
|ontology_enrichment_celltype=CL:0000791!1.45e-08!18;CL:0000789!1.45e-08!18;CL:0002420!1.45e-08!18;CL:0002419!1.45e-08!18;CL:0000790!1.45e-08!18;CL:0000766!7.72e-08!76 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.30e-08;18!CL:0000789;1.30e-08;18!CL:0002419;1.30e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.45e-08,18;CL:0000789,1.45e-08,18;CL:0002420,1.45e-08,18;CL:0002419,1.45e-08,18;CL:0000790,1.45e-08,18;CL:0000766,5.22e-08,72 | |||
|ontology_enrichment_development_v019=CL:0000790;1.30e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.39e-08!102;UBERON:0003061!7.39e-08!102;UBERON:0002193!1.62e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.89e-08,98;UBERON:0003061,5.89e-08,98;UBERON:0002193,1.37e-07,108 | |||
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| |||
|short_description=p1@RNF213 | |||
}} |
Latest revision as of 03:52, 18 September 2015
Short description: | p1@RNF213 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RNF213_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000319921, ENST00000456466, ENST00000508628, ENST00000558564, NM_020914, NM_020954, uc002jye.1, uc002jyf.2_5end |
EntrezGene: | RNF213 |
HGNC: | 14539 |
UniProt: | Q9HCF4D6RI12C9JCP4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.45e-08 | 18 |
alpha-beta T cell | 1.45e-08 | 18 |
immature T cell | 1.45e-08 | 18 |
mature T cell | 1.45e-08 | 18 |
immature alpha-beta T cell | 1.45e-08 | 18 |
myeloid leukocyte | 5.22e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.89e-08 | 98 |
blood island | 5.89e-08 | 98 |
hemolymphoid system | 1.37e-07 | 108 |