FFCP PHASE1:Hg19::chr17:8063773..8063784,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6844 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=12643 | |||
|TSSclassifier=strong | |||
|UniProt=Q69Z01 | |||
|association_with_transcript=162bp_to_AL050223_5end | |||
|cluster_id=chr17:8063773..8063784,- | |||
|coexpression_cluster_id=C317 | |||
|description=CAGE_peak_17_at_VAMP2_5end | |||
|id=chr17:8063773..8063784,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000775;1.68e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,2.13e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.63e-08;82!UBERON:0006241;1.68e-07;3!UBERON:0003057;1.68e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.06e-38!57;UBERON:0005068!2.06e-38!57;UBERON:0006241!2.06e-38!57;UBERON:0007135!2.06e-38!57;UBERON:0002616!1.80e-32!59;UBERON:0002780!3.40e-32!41;UBERON:0001890!3.40e-32!41;UBERON:0006240!3.40e-32!41;UBERON:0005743!3.82e-32!86;UBERON:0000955!4.72e-32!69;UBERON:0006238!4.72e-32!69;UBERON:0003080!5.06e-31!42;UBERON:0001017!5.60e-31!82;UBERON:0000073!7.26e-31!94;UBERON:0001016!7.26e-31!94;UBERON:0002346!1.27e-29!90;UBERON:0007023!4.41e-29!115;UBERON:0003075!5.38e-29!86;UBERON:0007284!5.38e-29!86;UBERON:0002020!4.22e-28!34;UBERON:0003528!4.22e-28!34;UBERON:0001893!5.50e-28!34;UBERON:0002791!4.28e-27!33;UBERON:0001869!2.15e-26!32;UBERON:0002619!1.13e-22!22;UBERON:0003056!1.53e-22!61;UBERON:0001950!1.04e-20!20;UBERON:0000956!1.57e-20!25;UBERON:0000203!1.57e-20!25;UBERON:0000153!2.28e-19!129;UBERON:0007811!2.28e-19!129;UBERON:0000033!1.09e-18!123;UBERON:0000924!6.02e-16!173;UBERON:0006601!6.02e-16!173;UBERON:0004121!2.93e-15!169;UBERON:0002420!2.76e-09!9;UBERON:0007245!2.76e-09!9;UBERON:0010009!2.76e-09!9;UBERON:0010011!2.76e-09!9;UBERON:0000454!2.76e-09!9;UBERON:0001871!3.95e-09!7;UBERON:0002308!5.29e-09!9;UBERON:0000125!5.29e-09!9;UBERON:0003076!1.41e-08!15;UBERON:0003057!1.41e-08!15;UBERON:0000025!4.25e-08!194;UBERON:0000477!8.47e-08!286;UBERON:0000064!1.77e-07!219;UBERON:0009663!2.71e-07!7;UBERON:0000200!3.03e-07!6;UBERON:0004111!6.39e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.12e-60;22!UBERON:0000956;5.48e-53;25!UBERON:0000203;5.48e-53;25!UBERON:0001950;1.66e-51;20!UBERON:0001869;4.42e-47;32!UBERON:0002791;8.33e-42;32!UBERON:0002780;6.39e-41;41!UBERON:0001890;6.39e-41;41!UBERON:0003528;8.39e-41;34!UBERON:0002020;8.39e-41;34!UBERON:0001893;1.34e-39;34!UBERON:0000073;2.91e-27;53!UBERON:0002616;2.91e-27;53!UBERON:0001871;9.13e-26;6!UBERON:0000955;3.69e-25;68!UBERON:0001017;1.72e-21;75!UBERON:0000200;2.80e-21;6!UBERON:0001016;1.01e-18;83!UBERON:0002021;6.70e-17;5!UBERON:0000349;9.66e-17;5!UBERON:0002784;6.64e-12;4!UBERON:0001894;1.24e-11;7!UBERON:0002771;1.98e-11;2!UBERON:0001876;2.09e-11;2!UBERON:0002702;2.31e-11;2!UBERON:0001954;3.15e-11;2!UBERON:0003022;3.15e-11;2!UBERON:0002421;3.15e-11;2!UBERON:0002600;3.15e-11;2!UBERON:0001905;3.77e-11;2!UBERON:0002757;3.77e-11;2!UBERON:0010134;3.77e-11;2!UBERON:0005408;3.77e-11;2!UBERON:0001899;3.77e-11;2!UBERON:0011216;4.72e-11;132!UBERON:0001872;1.06e-09;5!UBERON:0001870;7.51e-08;3!UBERON:0002114;8.32e-08;2!UBERON:0007023;1.36e-07;114!UBERON:0002240;1.68e-07;3!UBERON:0005174;1.68e-07;3!UBERON:0001137;1.68e-07;3!UBERON:0000922;8.50e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,8.14e-61,22;UBERON:0001049,2.97e-59,56;UBERON:0005068,2.97e-59,56;UBERON:0006241,2.97e-59,56;UBERON:0007135,2.97e-59,56;UBERON:0002780,4.35e-59,41;UBERON:0001890,4.35e-59,41;UBERON:0003080,4.35e-59,41;UBERON:0006240,4.35e-59,41;UBERON:0000073,1.39e-53,53;UBERON:0002616,1.39e-53,53;UBERON:0000956,2.36e-53,25;UBERON:0000203,2.36e-53,25;UBERON:0001950,8.22e-52,20;UBERON:0001869,1.01e-51,32;UBERON:0000955,2.28e-51,68;UBERON:0006238,2.28e-51,68;UBERON:0001017,4.25e-49,81;UBERON:0003528,1.10e-48,34;UBERON:0002020,1.10e-48,34;UBERON:0001893,1.61e-48,34;UBERON:0002791,1.73e-46,32;UBERON:0001016,1.14e-43,89;UBERON:0003075,7.80e-39,82;UBERON:0007284,7.80e-39,82;UBERON:0003056,2.41e-38,61;UBERON:0002346,8.94e-37,86;UBERON:0010371,1.89e-29,104;UBERON:0001871,5.02e-26,6;UBERON:0010314,6.17e-26,132;UBERON:0007023,1.92e-22,114;UBERON:0000200,3.96e-21,6;UBERON:0004121,4.62e-20,171;UBERON:0000924,4.62e-20,171;UBERON:0006601,4.62e-20,171;UBERON:0011216,3.77e-19,223;UBERON:0000349,4.67e-17,5;UBERON:0002021,7.31e-17,5;UBERON:0000025,1.46e-14,192;UBERON:0002784,4.49e-12,4;UBERON:0001894,1.04e-11,7;UBERON:0006222,1.04e-11,7;UBERON:0001876,1.12e-11,2;UBERON:0002771,1.18e-11,2;UBERON:0001954,2.32e-11,2;UBERON:0003022,2.32e-11,2;UBERON:0002421,2.32e-11,2;UBERON:0002600,2.32e-11,2;UBERON:0001905,3.16e-11,2;UBERON:0002702,3.16e-11,2;UBERON:0002757,3.16e-11,2;UBERON:0010134,3.16e-11,2;UBERON:0005408,3.16e-11,2;UBERON:0001899,3.16e-11,2;UBERON:0004111,1.87e-10,240;UBERON:0001872,6.95e-10,5;UBERON:0000483,1.77e-08,306;UBERON:0000119,2.46e-08,309;UBERON:0001870,9.23e-08,3;UBERON:0002114,1.25e-07,2;UBERON:0002240,1.74e-07,3;UBERON:0005174,1.74e-07,3;UBERON:0001137,1.74e-07,3 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.37129905888014,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0.286235987131057,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0.802177789880567,0.868043482863407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376484679085209,0,0,0.612167784741805,0,0,0,0.199463657621632,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0.393419540227666,0.786021525498329,0.205601498999509,0,0.32592226663359,0,0,0,0,0,0.270803863765016,0,0.520237390239513,0,0.552700035571697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0.201606743224732,0.802320587350522,0.289648807765598,0,0,0,0.361439152384566,0,0,0,0,0,0,0.175669571386252,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0.117434498643765,0.161872944368132,0.140450806702248,0.204154171254893,0.122834317311768,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0.213557388818567,0,0.300091096084402,0,0.257640540045629,0.18611685633159,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0.088048434013226,0,0.144119953416961,0,0,0,0,0,0.205654985406647,0,0.285826432630578,0,0,0,0.129271715757778,0,0,0,0,0,1.41849132023278,0,0.142977993658148,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0.112085143993527,0.197030760201927,0.646882724578552,0.513372145118994,0.254094624222463,0,0,0,0.637938751653163,1.49801404789436,0,1.24324654030811,0.12269149171914,0.500170521059677,0,0.207970861530807,0.535286966391485,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0.413536052245775,0.431428401637234,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0.262248829918848,0,0.0770153371044148,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0.256450125116389,0.656029291399411,0,0.103041011647722,0,0,0,0,0,0,0,0.15350367472613,0,0,0.145016693914229,0,0.178064071293475,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0.42793898803392,0.318203247925937,0,0,0,0.117812402345686,0,0,0,0,0,0,0.545999645631943,0,0,0,0,0,0.578775534266688,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0.987884678879706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.822724546172388,0,0.540031437238115,0,0,0,0,0,0,0,0.318852545457645,0,0,0.211673582723883,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0.121360521749513,0.222886768554957,0,0,0,0,6.95903353436409,1.96937182974718,0.111308705022906,0,0,0.597743964753209,0.276283915531148,0,0.20453736500431,0.123084805461069,0,0,0,0.511572370226872,0,0,0,4.84666373047609,1.66982576691332,3.99227596002388,0,0,0,0.227586896570999,0,0.236387681767936,0,0,0.173624994933292,0.885741385813839,0.723578631752448,0,0.774054819518572,5.91095237907095,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0.158936578980379,0.210998064528027,0,0,0,0,0,0.611030144933625,0,0,0.104421949505455,0.606610196826093,1.60515529459758,1.40558667435203,0,0.19566461893209,0.242780379534093,0.789168805698781,1.20990716048664,1.53036380815245,0.126373159256976,0,0.103688191397247,0,0,0,0,0,0.277349346026277,0,0,0,0,0,0,0,0.0821154570532092,0.193978032976839,0,0.90392296312213,0,0,0.949661939338181,0.977756913674015,0,0,0,0,0,0.171594997861965,0,0,0,0.135904206073614,0,0.101998217636322,0,3.60252173225874,0.958337652243951,0,0,0,0.279282401272254,0.458320848023367,0,0.399358000997982,0,0,0.0671834724867263,0,0,0,0,0.0674035438541849,0,0.169346664131569,3.97614844904652,1.63444087333891,0,0,0,0,0,0.850493793212345,0,0,0,0,0,0,0,0.662091970365432,0.25426853765475,0,0.864221491201268,0.326587360109409,0,0,0,0,0.439656701034247,0,1.55139547633861,0.79339561045614,0,0,0.106787412567695,0.157204305099666,0.828478110694391,0.496166021811951,0,0,0,0,0,0,0,0,5.31640907980192,7.19954962921583,1.3771002377715,0.573409195690071,0.998361463831671,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0.308801447160972,0,0,0.192914038270915,0,0,0,0,1.7973596699725,0,0,0,0,0,0.422624246717254,0.19998739585493,0,0,0,0,0,0,0,0.323474434190045,0,0.218419276384028,0.169732529954025,0.212574920101683,0,0,0,0.0788617450012534,0,0,0,0.578063025868136,1.41696576325585,2.39450788585727,2.66651273512982,5.04143392443436,0.345786262321089,2.09918339321406,0,0.0981477185010256,0,0,0.231051332300676,0,0,0.198916222116275,0.150420656698515,0.20170506870352,0,0,0.163771917510097,0,1.01306376927592,1.56215619722769,1.86018116851066,0.570742291745161,4.37579847214576,0,1.48863353516788,0.175871244359621,0.127762427639595,1.60710550763486,2.017702333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| |||
|short_description=p17@VAMP2 | |||
}} |
Latest revision as of 13:29, 18 September 2015
Short description: | p17@VAMP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_VAMP2_5end |
Coexpression cluster: | C317_Neutrophils_medial_amygdala_occipital_hippocampus_brain_parietal |
Association with transcript: | 162bp_to_AL050223_5end |
EntrezGene: | VAMP2 |
HGNC: | 12643 |
UniProt: | Q69Z01 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 2.13e-07 | 3 |