FFCP PHASE1:Hg19::chr19:36391434..36391450,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84807 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15671 | |||
|TSSclassifier=strong | |||
|UniProt=Q8NI38 | |||
|association_with_transcript=101bp_to_ENST00000396901,NM_139239,uc002oci.1,uc002ocj.1_5end | |||
|cluster_id=chr19:36391434..36391450,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_1_at_NFKBID_5end | |||
|id=chr19:36391434..36391450,- | |||
|ontology_enrichment_celltype=CL:0000037!1.83e-59!172;CL:0000566!1.83e-59!172;CL:0000738!3.90e-56!140;CL:0000988!1.05e-55!182;CL:0002032!3.97e-55!165;CL:0000837!3.97e-55!165;CL:0002031!4.73e-43!124;CL:0002087!1.28e-42!119;CL:0000763!3.55e-38!112;CL:0000049!3.55e-38!112;CL:0000766!4.29e-34!76;CL:0000557!5.27e-31!71;CL:0002009!2.08e-27!65;CL:0000839!2.89e-27!70;CL:0002194!4.17e-26!63;CL:0000576!4.17e-26!63;CL:0000040!4.17e-26!63;CL:0000559!4.17e-26!63;CL:0002057!2.97e-25!42;CL:0000860!9.53e-25!45;CL:0000542!1.91e-14!53;CL:0000051!1.91e-14!53;CL:0000838!6.66e-14!52;CL:0000134!3.26e-13!358;CL:0002320!2.03e-11!365;CL:0000219!5.72e-11!390;CL:0000945!6.09e-10!24;CL:0000826!6.09e-10!24;CL:0000236!1.73e-07!14;CL:0000451!2.92e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.49e-22;33!CL:0002057;3.49e-22;33!CL:0000473;4.85e-21;39!CL:0000234;4.85e-21;39!CL:0000766;1.06e-16;69!CL:0000576;2.43e-16;48!CL:0000738;1.46e-13;136!CL:0002087;1.98e-13;104!CL:0000763;1.25e-12;100!CL:0000945;4.39e-11;24!CL:0000988;8.19e-11;177!CL:0000542;1.63e-09;53!CL:0000451;2.66e-08;10!CL:0000236;7.52e-08;13!CL:0000094;3.04e-07;8!CL:0000990;6.70e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,4.98e-68,168;CL:0000988,8.71e-65,177;CL:0000738,3.27e-64,136;CL:0002032,5.93e-63,161;CL:0000837,5.93e-63,161;CL:0002031,5.35e-49,120;CL:0002087,2.28e-48,115;CL:0000763,5.07e-44,108;CL:0000049,5.07e-44,108;CL:0000766,1.84e-39,72;CL:0000557,8.19e-36,67;CL:0000473,2.38e-32,48;CL:0000234,2.38e-32,48;CL:0002009,1.45e-31,61;CL:0000839,1.80e-31,66;CL:0002194,5.06e-30,59;CL:0000576,5.06e-30,59;CL:0000040,5.06e-30,59;CL:0000559,5.06e-30,59;CL:0000860,1.77e-29,42;CL:0002057,1.77e-29,42;CL:0000542,4.93e-16,53;CL:0000051,4.93e-16,53;CL:0000134,6.85e-16,354;CL:0000838,2.10e-15,52;CL:0002320,2.22e-14,361;CL:0000219,1.04e-12,386;CL:0000945,5.11e-11,24;CL:0000826,5.11e-11,24;CL:0000236,2.75e-08,14;CL:0000451,2.81e-08,10;CL:0000034,4.37e-08,441;CL:0000048,1.63e-07,427;CL:0000094,3.14e-07,8;CL:0000723,6.48e-07,433;CL:0000990,6.95e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.87e-21;42!CL:0000049;7.85e-12;108!CL:0000051;1.63e-09;53 | |||
|ontology_enrichment_disease=DOID:2531!6.30e-07!51;DOID:0060083!6.30e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.85e-07,51;DOID:0060083,2.85e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.74e-35!102;UBERON:0003061!1.74e-35!102;UBERON:0002193!1.90e-30!112;UBERON:0002371!5.41e-28!80;UBERON:0001474!1.44e-24!86;UBERON:0002405!1.02e-18!115;UBERON:0004765!9.45e-18!101;UBERON:0001434!9.45e-18!101;UBERON:0002384!8.10e-11!375;UBERON:0003081!1.33e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.76e-07;15!UBERON:0000179;1.76e-07;15!UBERON:0000463;1.76e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.45e-39,98;UBERON:0003061,1.45e-39,98;UBERON:0002193,3.12e-35,108;UBERON:0002371,7.31e-31,76;UBERON:0002405,1.39e-28,93;UBERON:0001474,3.16e-27,82;UBERON:0004765,6.96e-22,90;UBERON:0001434,5.30e-18,100;UBERON:0002384,1.29e-13,371;UBERON:0003081,9.88e-10,203;UBERON:0000178,2.01e-07,15;UBERON:0000179,2.01e-07,15;UBERON:0000463,2.01e-07,15 | |||
|phase1_expression=0.54503513781167,0.428201047781966,0.422863212287913,0,0.446961094427288,0,0,0,0.261185628199839,0.737201809504527,2.09340350391728,0.655324116390517,0.527533956456907,0,0.331397375727916,0,0.602694528023977,0,0,0.369363174230364,0.204000691244253,0.940364164434263,0,0.547497700291537,0.502170558379211,4.89045796786888,5.25443772479653,4.171671409625,12.9810211360138,8.82807615623589,36.3817889792779,0.919421224478927,1.8072355126695,0.369754010166788,4.33816323249689,5.40243083452202,12.9184193307333,109.13709548078,86.2341124121609,109.807500582221,0.671746422719773,1.6194683300949,2.57575567634187,17.8839833698865,16.6265415223076,19.8918930174009,53.2262494514018,58.3858400990993,96.3186813483772,102.130799274363,68.9072300563281,62.6677909204751,151.688099524112,121.996605197343,153.031929851606,38.2131949271488,40.663016358619,37.9782688712193,138.96208713639,112.325159476633,157.276932946564,13.1940520074686,19.9463657621632,14.0654167675789,54.8495461008024,76.0296201086127,89.0635816063672,51.7572250428891,42.7615993104565,39.3111808916261,47.8265607080361,61.5023652099233,71.204037174199,9.92899845666126,16.5831353972734,10.4829322754188,15.8383369916558,19.2226422837128,13.0187725224635,12.2555479808737,6.76316702476906,4.01861138282195,31.6793240030381,30.5837622306794,20.4587128388618,40.9661013663847,24.8245511962328,21.8405927182704,30.4080641481037,24.8053976179195,102.458334439701,119.796386631672,134.560176300081,37.0079720021272,57.7323819870982,4.21414535640123,6.09800287352883,4.32311839024081,3.70082698199117,0.668745981562712,2.93330039970231,2.36723902867367,1.94826728407911,1.11410456885174,0.883817722424512,0.664601683750863,0.270803863765016,1.79327847615945,2.08094956095805,2.30213066445147,2.21080014228679,0.289803085735052,0.741432815810302,0,1.04535523804977,1.69964014046349,0.383220493601921,2.40539211837841,2.02415753615602,4.45991580053735,0.651083453856419,2.85135613334512,2.86092726247768,1.91979916731628,3.74792179657038,3.78843603270427,0,3.62892137804518,5.08136371988664,3.91025890483557,0,0.670700859703636,0,0.361439152384566,2.00535164254356,0.724232594804119,0,0.973269740605272,0.661743720148475,0.221729397462564,0.175669571386252,1.70272798147026,1.09288586487763,2.22470665670658,9.08732702233113,7.66170844116776,10.7695948020281,55.3298248388393,70.3553740259557,49.0323901755026,0.198762407366705,0,0,0.56530794192401,0.419499436209906,0.275118041940067,0,0.258416759169329,0,0,0.402829317109147,0,0.488124115096339,0,0,0.535798369704479,1.12264686313085,0.337834441449967,1.53316637465883,0,0.366403487860815,254.336205651602,461.458514336507,0,0,0.12663051166458,2.38336525463794,0.573673241497627,0.354668382198357,0.560677600142307,0,0.74000264525148,0.311211035399766,0.269421344139376,0.163461903113459,0.151357427644931,0,0,0.936480230490962,0,0.597794722207204,0.704606991862589,0.809364721840658,0.98315564691574,0,1.22834317311768,0.206651562351531,0,0.247266929278557,2.73048408581408,0,0.673344455816265,0.750711119231785,0,0.438977620880838,1.22595118319608,0.300476117813194,0.453728732640084,2.69084453533293,0.213557388818567,0,1.20036438433761,0.721367704669072,3.09168648054755,0.18611685633159,3.20675031258406,0.487185025805993,2.52433774244115,0.0920498986422993,0,1.42003837006646,0.503760491138201,0.169560592310488,0.193260853163297,1.09098448236334,0,2.43947412259191,1.32529768321485,1.2781333715647,1.45125477021519,2.01856680700503,1.45990943630332,1.56449532329816,0.643240938192885,0,0.464367928031979,0,1.0647612003586,0.674338760312407,0.723033089650446,0.661763836394364,1.08939722046203,0.71181185733329,2.96628877952362,2.15843611637881,2.30848294167834,0.738155454624648,1.40241773803446,0,0,0,0,1.18157981336281,3.97316789473185,0.245976877086227,1.02940686179115,0.329250856225877,0,1.3068766413512,0.462942225792648,0.977424915930974,2.07986957055916,0,0.463721619900307,0.234817388471643,0.288732895522148,0,0.570762456703795,3.95102198979638,2.57545848628462,4.92434012174795,9.12616634043027,8.17471392588005,0.93733833986777,0,0.425325291727159,0,0.581267877027924,1.91691339582606,78.333454825455,8.54069809928293,69.6622468216994,26.229831521887,69.6858232513617,1.46045156871989,3.05590740446622,2.34434894420094,3.4214489204541,2.26220483947312,0.600686115687835,0,0.336393253036082,0,0.22001485746285,0.387815147273333,3.57656445851882,0.845302752556,0,0,0.771622122786426,4.25547396069835,0.266422179016099,0,0,0.823240336780769,0.65147236858747,0,0.791951872933429,0,1.74306691720059,0.099972991182057,15.8110914833548,5.02257091432126,6.32501818449095,0,0,0,0.579125226670317,0.61642896765115,0.179060963239896,5.82842748766342,10.0485687702983,9.27198571895924,14.5027630996116,0,0,0.773288812777695,0.167516265334349,1.27587750330633,164.032538244433,155.563958786093,134.270626353275,0.12269149171914,0,0,0.623912584592421,0.178428988797162,0.315404830067869,0,0,0,0,0,0.737476674166813,0.347534457872331,0.587403472388222,0,13.0263856457419,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| |||
|short_description=p1@NFKBID | |||
}} |
Latest revision as of 14:22, 17 September 2015
Short description: | p1@NFKBID |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NFKBID_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 101bp_to_ENST00000396901, NM_139239, uc002oci.1, uc002ocj.1_5end |
EntrezGene: | NFKBID |
HGNC: | 15671 |
UniProt: | Q8NI38 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.45e-39 | 98 |
blood island | 1.45e-39 | 98 |
hemolymphoid system | 3.12e-35 | 108 |
bone marrow | 7.31e-31 | 76 |
immune system | 1.39e-28 | 93 |
bone element | 3.16e-27 | 82 |
skeletal element | 6.96e-22 | 90 |
skeletal system | 5.30e-18 | 100 |
connective tissue | 1.29e-13 | 371 |
lateral plate mesoderm | 9.88e-10 | 203 |
blood | 2.01e-07 | 15 |
haemolymphatic fluid | 2.01e-07 | 15 |
organism substance | 2.01e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.85e-07 | 51 |
immune system cancer | 2.85e-07 | 51 |