FFCP PHASE1:Hg19::chr19:40477062..40477112,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5704 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9551 | |||
|TSSclassifier=strong | |||
|UniProt=P43686,A8K2M0 | |||
|association_with_transcript=0bp_to_ENST00000157812,ENST00000455878,NM_006503,NM_153001,uc002omq.2,uc002omr.2_5end | |||
|cluster_id=chr19:40477062..40477112,+ | |||
|description=CAGE_peak_1_at_PSMC4_5end | |||
|id=chr19:40477062..40477112,+ | |||
|ontology_enrichment_celltype=CL:0000548!6.63e-30!679;CL:0000004!6.63e-30!679;CL:0000255!6.63e-30!679;CL:0000012!2.49e-29!682;CL:0000003!2.01e-19!722;CL:0000144!7.18e-19!625;CL:0002321!4.63e-17!248;CL:0000220!6.44e-17!246;CL:0000222!6.74e-14!119;CL:0000066!2.43e-13!254;CL:0002371!3.14e-13!591;CL:0000055!8.55e-13!180;CL:0000183!2.61e-11!59;CL:0000192!7.32e-11!42;CL:0000514!7.32e-11!42;CL:0000393!8.81e-11!60;CL:0000211!8.81e-11!60;CL:0000359!1.73e-10!32;CL:0000187!1.60e-09!54;CL:0000680!1.96e-09!57;CL:0000056!1.96e-09!57;CL:0000355!1.96e-09!57;CL:0000063!3.88e-09!578 | |||
|ontology_enrichment_celltype_v019=CL:0000359;5.83e-10;32!CL:0000192;6.72e-08;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.49e-17,250;CL:0000222,5.86e-14,121;CL:0000066,1.59e-13,253;CL:0000359,1.73e-10,32;CL:0000393,2.13e-10,61;CL:0000211,2.13e-10,61;CL:0000192,2.27e-10,43;CL:0000514,2.27e-10,43;CL:0000187,3.76e-09,55;CL:0000680,4.45e-09,58;CL:0000056,4.45e-09,58;CL:0000355,4.45e-09,58 | |||
|ontology_enrichment_development_v019=CL:0000514;6.72e-08;43 | |||
|ontology_enrichment_disease=DOID:14566!7.53e-08!239;DOID:162!1.93e-07!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,7.53e-08,239;DOID:162,1.93e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0001637!2.57e-13!42;UBERON:0003509!2.57e-13!42;UBERON:0004572!2.57e-13!42;UBERON:0003914!1.63e-11!118;UBERON:0002100!1.91e-11!216;UBERON:0000490!1.56e-10!138;UBERON:0003104!2.04e-10!238;UBERON:0009142!2.04e-10!238;UBERON:0004573!5.98e-10!33;UBERON:0004571!5.98e-10!33;UBERON:0005256!6.87e-10!143;UBERON:0002049!8.75e-10!79;UBERON:0007798!8.75e-10!79;UBERON:0001981!1.01e-09!60;UBERON:0007500!1.01e-09!60;UBERON:0004537!1.01e-09!60;UBERON:0006965!1.01e-09!60;UBERON:0000055!1.31e-09!69;UBERON:0004290!3.50e-09!70;UBERON:0001134!1.40e-08!61;UBERON:0002036!1.40e-08!61;UBERON:0003082!1.40e-08!61;UBERON:0000914!7.03e-08!83;UBERON:0002329!7.03e-08!83;UBERON:0003077!7.03e-08!83;UBERON:0003059!7.03e-08!83;UBERON:0007282!7.03e-08!83;UBERON:0009618!7.03e-08!83;UBERON:0007285!7.03e-08!83;UBERON:0004872!8.58e-08!84;UBERON:0002385!1.45e-07!63;UBERON:0001015!1.45e-07!63;UBERON:0000383!1.45e-07!63;UBERON:0000486!2.39e-07!82;UBERON:0009569!3.73e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.11e-09;42!UBERON:0003509;1.11e-09;42!UBERON:0004572;1.11e-09;42!UBERON:0004573;5.62e-09;33!UBERON:0004571;5.62e-09;33!UBERON:0007500;1.92e-07;56!UBERON:0001981;1.92e-07;56!UBERON:0004537;1.92e-07;56!UBERON:0003914;3.46e-07;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,2.57e-13,42;UBERON:0003509,2.57e-13,42;UBERON:0004572,2.57e-13,42;UBERON:0002100,5.41e-13,199;UBERON:0003914,8.86e-12,117;UBERON:0000490,4.72e-11,148;UBERON:0007503,5.67e-11,78;UBERON:0007500,2.70e-10,59;UBERON:0001981,2.70e-10,59;UBERON:0004537,2.70e-10,59;UBERON:0006965,2.70e-10,59;UBERON:0002049,2.84e-10,78;UBERON:0007798,2.84e-10,78;UBERON:0000055,3.93e-10,68;UBERON:0004573,5.98e-10,33;UBERON:0004571,5.98e-10,33;UBERON:0003104,1.81e-09,160;UBERON:0009142,1.81e-09,160;UBERON:0005256,2.40e-09,122;UBERON:0002329,7.06e-09,71;UBERON:0003059,7.06e-09,71;UBERON:0007282,7.06e-09,71;UBERON:0004290,7.06e-09,71;UBERON:0009618,7.06e-09,71;UBERON:0003077,1.29e-08,72;UBERON:0007285,1.29e-08,72;UBERON:0007524,2.29e-08,73;UBERON:0001134,2.90e-08,62;UBERON:0002036,2.90e-08,62;UBERON:0003082,2.90e-08,62;UBERON:0004872,3.39e-08,83;UBERON:0002385,2.77e-07,64;UBERON:0001015,2.77e-07,64;UBERON:0000383,2.77e-07,64;UBERON:0009569,3.92e-07,112;UBERON:0000486,4.08e-07,83 | |||
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| |||
|short_description=p1@PSMC4 | |||
}} |
Latest revision as of 00:51, 18 September 2015
Short description: | p1@PSMC4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PSMC4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000157812, ENST00000455878, NM_006503, NM_153001, uc002omq.2, uc002omr.2_5end |
EntrezGene: | PSMC4 |
HGNC: | 9551 |
UniProt: | P43686A8K2M0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.49e-17 | 250 |
mesodermal cell | 5.86e-14 | 121 |
epithelial cell | 1.59e-13 | 253 |
vascular associated smooth muscle cell | 1.73e-10 | 32 |
electrically responsive cell | 2.13e-10 | 61 |
electrically active cell | 2.13e-10 | 61 |
smooth muscle cell | 2.27e-10 | 43 |
smooth muscle myoblast | 2.27e-10 | 43 |
muscle cell | 3.76e-09 | 55 |
muscle precursor cell | 4.45e-09 | 58 |
myoblast | 4.45e-09 | 58 |
multi-potent skeletal muscle stem cell | 4.45e-09 | 58 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 7.53e-08 | 239 |
cancer | 1.93e-07 | 235 |