FFCP PHASE1:Hg19::chr19:54369752..54369762,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:54369752..54369762,+ | |||
|coexpression_cluster_id=C325 | |||
|description=CAGE_peak_at_chr19:54369752..54369762,+ | |||
|id=chr19:54369752..54369762,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.01e-18!42;CL:0000766!5.04e-18!76;CL:0000860!7.90e-17!45;CL:0000738!3.08e-16!140;CL:0000557!1.38e-12!71;CL:0002393!1.84e-12!9;CL:0002397!1.84e-12!9;CL:0000037!4.90e-12!172;CL:0000566!4.90e-12!172;CL:0000839!8.16e-12!70;CL:0000988!5.88e-11!182;CL:0000763!1.81e-10!112;CL:0000049!1.81e-10!112;CL:0002009!2.02e-10!65;CL:0002031!2.25e-10!124;CL:0002194!5.58e-10!63;CL:0000576!5.58e-10!63;CL:0000040!5.58e-10!63;CL:0000559!5.58e-10!63;CL:0002087!7.74e-10!119;CL:0002032!8.31e-10!165;CL:0000837!8.31e-10!165;CL:0000094!2.42e-09!8 | |||
|ontology_enrichment_celltype_v019=CL:0000094;7.53e-27;8!CL:0000081;2.17e-19;11!CL:0000623;7.32e-19;3!CL:0002393;4.48e-16;6!CL:0002397;4.48e-16;6!CL:0000771;1.04e-13;2!CL:0000766;8.30e-12;69!CL:0000097;1.57e-11;5!CL:0000767;4.50e-09;3!CL:0000226;1.01e-08;3!CL:0000775;1.01e-08;3!CL:0000842;1.01e-08;3!CL:0000037;3.72e-07;1!CL:0001024;3.72e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.65e-28,136;CL:0000094,4.06e-27,8;CL:0000037,5.47e-24,168;CL:0000766,9.74e-23,72;CL:0000988,1.71e-22,177;CL:0002032,1.23e-19,161;CL:0000837,1.23e-19,161;CL:0000081,1.39e-19,11;CL:0000623,5.62e-19,3;CL:0000825,5.62e-19,3;CL:0000763,8.86e-16,108;CL:0000049,8.86e-16,108;CL:0002031,2.84e-15,120;CL:0000771,1.01e-13,2;CL:0002087,1.84e-12,115;CL:0000557,4.01e-12,67;CL:0000097,1.01e-11,5;CL:0002028,1.01e-11,5;CL:0002393,1.18e-10,9;CL:0002397,1.18e-10,9;CL:0000839,2.08e-10,66;CL:0000860,7.74e-10,42;CL:0002057,7.74e-10,42;CL:0000767,2.84e-09,3;CL:0000775,9.40e-09,3;CL:0000134,1.90e-08,354;CL:0000226,1.97e-08,3;CL:0000842,1.97e-08,3;CL:0000473,1.99e-08,48;CL:0000234,1.99e-08,48;CL:0002320,3.57e-08,361;CL:0002009,1.04e-07,61;CL:0001024,3.02e-07,1;CL:0000219,3.31e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;9.85e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.96e-16!102;UBERON:0003061!8.96e-16!102;UBERON:0002193!4.25e-13!112;UBERON:0002371!8.94e-12!80;UBERON:0001474!9.88e-12!86;UBERON:0004765!8.83e-10!101;UBERON:0001434!8.83e-10!101;UBERON:0002405!3.41e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.16e-09;15!UBERON:0000179;1.16e-09;15!UBERON:0000463;1.16e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.06e-17,98;UBERON:0003061,2.06e-17,98;UBERON:0002193,1.90e-15,108;UBERON:0002371,3.28e-12,76;UBERON:0001474,3.99e-11,82;UBERON:0004765,6.67e-10,90;UBERON:0002405,1.69e-09,93;UBERON:0000178,1.77e-09,15;UBERON:0000179,1.77e-09,15;UBERON:0000463,1.77e-09,15;UBERON:0001434,1.19e-08,100;UBERON:0002384,8.46e-08,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0.125542639594803,0,0,0,1.96682138424452,0.767658796194425,4.33485145285013,0,0,0,0,0,1.46800219667424,1.66198622559563,0.802177789880567,3.47217393145363,0,0,0,0.290796477559129,0,0.242584061187816,0.697287110717054,0,0,0.28769239232215,0,0,1.03423704220986,0,1.35426486594342,0.188242339542605,0.272906150057846,0.898893937780338,0.612167784741805,0,1.91801137739712,0.329851300186716,0,0,0.580418477257168,0,1.24564449799115,0.251248665256743,0,0,0,0,0.632924774881769,1.05627643155971,0.850417199860174,1.04829322754188,0.673971786878971,1.95229960693958,0.803627933485401,0.570025487482497,0.79566670879636,0.365328307529268,0,1.09227722252426,0,0,0,0,0,0,0,1.17447437874188,0,2.64342657158052,0.560508562981536,0.263384084775077,0.393419540227666,0.786021525498329,1.43921049299656,0,0,0.473447805734733,0,0.111410456885174,0,0.443067789167242,0,0.128091319725675,0.260118695119756,0,0,0,0,0.267540828089713,0,0,0,0,0.506039384039006,0,0,0,0,0,0,0,0.821127996921047,1.00803371612366,0.534880391567015,0.434473211648397,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27121669744253,3.87780264148325,0,0,0.12663051166458,0.132409180813219,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0.113432183160021,0.538168907066586,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0.355009592516614,0,0.169560592310488,0,0,0.286804595389004,0.121973706129595,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0.435758888184812,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,1.44331342025273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,2.69526550203004,1.72943944100354,2.77733353538036,0,0,0,0,0,0,0,0.112131084345361,0,0,0.129271715757778,0,0,0,0,0,0,0,0.428933980974443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1673383622212,1.72502059887614,2.05348858047597,0,0,0,0,0,1.49801404789436,0,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,1.07857100409308,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0,1.23408681925858,1.29694662238543,2.16012574895246,0.79312517629427,0.106824071127473,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0.146508179271894,0,0,0.284136146806413,0.23874448473769,0,0.614321404198464,0,0.140669416410513,0,0,0,0.398495976502139,0,0,0,0,0.311039587661807,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0.19566461893209,0,0,0,0,0.063186579628488,0,0,0,0,0.313932918407225,0,0,0,0,0.195984794828755,0,0,0.171986032471617,0,0,0,0,0.0882561266915003,0,0,0,0.126621591911757,0,0.0801588202515337,0,0.39961921916426,0.288180834308212,0,0.343189995723929,0,0,0,0.135904206073614,0,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236349546921671,0.0824158583811665,0,0,0,0,0,0.321506296930038,0.275078873194468,0,0,1.5476039091159,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342173675768659,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0.122026264901963,0,0,0,0.0620964029413835,0,0,0,0,0,0,0.144921028610825,0.298509605773748,0,0,0.189403005275089,0,0,0.228840068396924,0.151230923763239,0,0,0,0,0,0,0.265841714557995,0,0.300515217994437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0.252071696221718,0,0,0,0,0,0,0,0,0,0.397832444232549,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0.546974809018219,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.135939465953663,0,0,0,0,0,0,0,0,0.9555033757741,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0.233939463462106,0.596852325484105,0,0,0,0.150962843566674,0,0,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252332849670158,0.109265571963696,0.126698501011437,0,0,0.0918948995348449,0,0,0,0,0,0,0,0.129177819672012,0.124149428591716,0.224263725161227,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p@chr19:54369752..54369762,+ | |||
}} |
Latest revision as of 17:02, 27 July 2015
Short description: | p@chr19:54369752..54369762, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:54369752..54369762, + |
Coexpression cluster: | C325_Mast_Eosinophils_CD14_immature_Basophils_granulocyte_Natural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.06e-17 | 98 |
blood island | 2.06e-17 | 98 |
hemolymphoid system | 1.90e-15 | 108 |
bone marrow | 3.28e-12 | 76 |
bone element | 3.99e-11 | 82 |
skeletal element | 6.67e-10 | 90 |
immune system | 1.69e-09 | 93 |
blood | 1.77e-09 | 15 |
haemolymphatic fluid | 1.77e-09 | 15 |
organism substance | 1.77e-09 | 15 |
skeletal system | 1.19e-08 | 100 |
connective tissue | 8.46e-08 | 371 |