FFCP PHASE1:Hg19::chr9:12775011..12775028,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:12775011..12775028,+
|short_description=p1@C9orf150
|description=CAGE_peak_1_at_C9orf150_5end
|association_with_transcript=0bp_to_ENST00000319264,NM_203403...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=286343 | |EntrezGene=286343 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31452 | |HGNC=31452 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IV03 | |UniProt=Q8IV03 | ||
|association_with_transcript=0bp_to_ENST00000319264,NM_203403,uc003zkw.2_5end | |||
|cluster_id=chr9:12775011..12775028,+ | |||
|description=CAGE_peak_1_at_C9orf150_5end | |||
|id=chr9:12775011..12775028,+ | |||
|ontology_enrichment_celltype=CL:0000055!8.81e-13!180;CL:0000220!2.03e-09!246;CL:0000057!5.92e-09!75;CL:0002321!6.07e-09!248;CL:0000680!9.50e-09!57;CL:0000056!9.50e-09!57;CL:0000355!9.50e-09!57;CL:0000187!1.42e-08!54;CL:0000192!1.88e-08!42;CL:0000514!1.88e-08!42;CL:0000183!1.03e-07!59;CL:0000393!8.51e-07!60;CL:0000211!8.51e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0000192;5.55e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,2.42e-09,58;CL:0000056,2.42e-09,58;CL:0000355,2.42e-09,58;CL:0000187,3.61e-09,55;CL:0000192,5.13e-09,43;CL:0000514,5.13e-09,43;CL:0000057,9.08e-09,76;CL:0002321,3.20e-07,250;CL:0000393,9.55e-07,61;CL:0000211,9.55e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000514;5.55e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.67e-22!365;UBERON:0002100!1.37e-19!216;UBERON:0000481!1.31e-16!347;UBERON:0003104!1.59e-15!238;UBERON:0009142!1.59e-15!238;UBERON:0004119!4.53e-13!169;UBERON:0000925!4.53e-13!169;UBERON:0006595!4.53e-13!169;UBERON:0005256!8.57e-13!143;UBERON:0000468!1.37e-12!659;UBERON:0001007!6.77e-11!155;UBERON:0001555!6.77e-11!155;UBERON:0007026!6.77e-11!155;UBERON:0000483!1.11e-10!309;UBERON:0000119!2.37e-10!312;UBERON:0000466!2.89e-10!126;UBERON:0000467!3.33e-09!625;UBERON:0004921!3.91e-09!129;UBERON:0004185!3.91e-09!129;UBERON:0000480!5.77e-09!626;UBERON:0000477!8.23e-09!286;UBERON:0002385!8.24e-09!63;UBERON:0001015!8.24e-09!63;UBERON:0000383!8.24e-09!63;UBERON:0004111!1.08e-08!241;UBERON:0001134!1.24e-08!61;UBERON:0002036!1.24e-08!61;UBERON:0003082!1.24e-08!61;UBERON:0009569!2.15e-08!113;UBERON:0000486!2.86e-08!82;UBERON:0000914!3.04e-08!83;UBERON:0002329!3.04e-08!83;UBERON:0003077!3.04e-08!83;UBERON:0003059!3.04e-08!83;UBERON:0007282!3.04e-08!83;UBERON:0009618!3.04e-08!83;UBERON:0007285!3.04e-08!83;UBERON:0000077!3.53e-08!130;UBERON:0003102!2.13e-07!95;UBERON:0003914!3.61e-07!118;UBERON:0004290!4.27e-07!70;UBERON:0000490!4.75e-07!138;UBERON:0000464!5.16e-07!104;UBERON:0002050!9.07e-07!605;UBERON:0005423!9.07e-07!605 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,1.84e-17,199;UBERON:0004119,7.96e-12,160;UBERON:0000925,7.96e-12,160;UBERON:0006595,7.96e-12,160;UBERON:0003104,1.10e-11,160;UBERON:0009142,1.10e-11,160;UBERON:0005256,1.62e-10,122;UBERON:0000483,1.77e-09,306;UBERON:0002385,2.15e-09,64;UBERON:0001015,2.15e-09,64;UBERON:0000383,2.15e-09,64;UBERON:0001007,2.18e-09,145;UBERON:0001555,2.18e-09,145;UBERON:0007026,2.18e-09,145;UBERON:0001134,3.26e-09,62;UBERON:0002036,3.26e-09,62;UBERON:0003082,3.26e-09,62;UBERON:0000119,3.60e-09,309;UBERON:0000486,1.21e-08,83;UBERON:0009569,4.68e-08,112;UBERON:0003102,6.15e-08,99;UBERON:0007524,7.94e-08,73;UBERON:0004921,1.55e-07,118;UBERON:0002329,1.60e-07,71;UBERON:0003059,1.60e-07,71;UBERON:0007282,1.60e-07,71;UBERON:0004290,1.60e-07,71;UBERON:0009618,1.60e-07,71;UBERON:0003077,1.95e-07,72;UBERON:0007285,1.95e-07,72;UBERON:0004111,2.88e-07,240;UBERON:0007503,8.40e-07,78 | |||
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| ||
|short_description=p1@C9orf150 | |||
}} | }} |
Latest revision as of 01:30, 25 September 2015
Short description: | p1@C9orf150 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C9orf150_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000319264, NM_203403, uc003zkw.2_5end |
EntrezGene: | C9orf150 |
HGNC: | 31452 |
UniProt: | Q8IV03 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 2.42e-09 | 58 |
myoblast | 2.42e-09 | 58 |
multi-potent skeletal muscle stem cell | 2.42e-09 | 58 |
muscle cell | 3.61e-09 | 55 |
smooth muscle cell | 5.13e-09 | 43 |
smooth muscle myoblast | 5.13e-09 | 43 |
fibroblast | 9.08e-09 | 76 |
embryonic cell | 3.20e-07 | 250 |
electrically responsive cell | 9.55e-07 | 61 |
electrically active cell | 9.55e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
trunk | 1.84e-17 | 199 |
endoderm-derived structure | 7.96e-12 | 160 |
endoderm | 7.96e-12 | 160 |
presumptive endoderm | 7.96e-12 | 160 |
mesenchyme | 1.10e-11 | 160 |
entire embryonic mesenchyme | 1.10e-11 | 160 |
trunk mesenchyme | 1.62e-10 | 122 |
epithelium | 1.77e-09 | 306 |
muscle tissue | 2.15e-09 | 64 |
musculature | 2.15e-09 | 64 |
musculature of body | 2.15e-09 | 64 |
digestive system | 2.18e-09 | 145 |
digestive tract | 2.18e-09 | 145 |
primitive gut | 2.18e-09 | 145 |
skeletal muscle tissue | 3.26e-09 | 62 |
striated muscle tissue | 3.26e-09 | 62 |
myotome | 3.26e-09 | 62 |
cell layer | 3.60e-09 | 309 |
multilaminar epithelium | 1.21e-08 | 83 |
subdivision of trunk | 4.68e-08 | 112 |
surface structure | 6.15e-08 | 99 |
dense mesenchyme tissue | 7.94e-08 | 73 |
subdivision of digestive tract | 1.55e-07 | 118 |
somite | 1.60e-07 | 71 |
presomitic mesoderm | 1.60e-07 | 71 |
presumptive segmental plate | 1.60e-07 | 71 |
dermomyotome | 1.60e-07 | 71 |
trunk paraxial mesoderm | 1.60e-07 | 71 |
paraxial mesoderm | 1.95e-07 | 72 |
presumptive paraxial mesoderm | 1.95e-07 | 72 |
anatomical conduit | 2.88e-07 | 240 |
epithelial vesicle | 8.40e-07 | 78 |