FFCP PHASE1:Hg19::chr2:204732580..204732598,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1493 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2505 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=9bp_to_ENST00000541886_5end | |||
|cluster_id=chr2:204732580..204732598,+ | |||
|coexpression_cluster_id=C103 | |||
|description=CAGE_peak_2_at_CTLA4_5end | |||
|id=chr2:204732580..204732598,+ | |||
|ontology_enrichment_celltype=CL:0000791!2.23e-21!18;CL:0000789!2.23e-21!18;CL:0002420!2.23e-21!18;CL:0002419!2.23e-21!18;CL:0000790!2.23e-21!18;CL:0000084!1.93e-19!25;CL:0000827!1.93e-19!25;CL:0000738!5.21e-18!140;CL:0002087!1.29e-15!119;CL:0000625!1.49e-14!11;CL:0002031!1.01e-11!124;CL:0000037!1.76e-11!172;CL:0000566!1.76e-11!172;CL:0000988!4.78e-11!182;CL:0000838!8.27e-11!52;CL:0000542!1.85e-10!53;CL:0000051!1.85e-10!53;CL:0000624!4.16e-10!6;CL:0002032!7.01e-10!165;CL:0000837!7.01e-10!165 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.97e-36;18!CL:0000789;2.97e-36;18!CL:0002419;2.97e-36;18!CL:0000084;4.58e-31;25!CL:0000625;5.32e-24;11!CL:0000624;2.39e-16;6!CL:0000542;2.75e-09;53!CL:0000898;3.70e-09;3!CL:0000226;1.18e-08;3!CL:0000842;1.18e-08;3!CL:0000623;2.65e-08;3!CL:0002619;6.91e-08;3!CL:0000815;9.94e-07;2!CL:0000792;9.94e-07;2!CL:0002677;9.94e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.63e-36,18;CL:0000789,2.63e-36,18;CL:0002420,2.63e-36,18;CL:0002419,2.63e-36,18;CL:0000790,2.63e-36,18;CL:0000084,3.98e-31,25;CL:0000827,3.98e-31,25;CL:0000625,4.69e-24,11;CL:0000738,2.40e-17,136;CL:0000838,3.17e-17,52;CL:0000542,8.73e-17,53;CL:0000051,8.73e-17,53;CL:0000624,2.39e-16,6;CL:0002087,2.92e-16,115;CL:0000037,4.30e-12,168;CL:0002031,7.43e-12,120;CL:0000988,5.63e-11,177;CL:0002032,2.57e-10,161;CL:0000837,2.57e-10,161;CL:0000898,3.71e-09,3;CL:0000226,1.18e-08,3;CL:0000842,1.18e-08,3;CL:0000623,2.55e-08,3;CL:0000825,2.55e-08,3;CL:0002619,6.75e-08,3;CL:0000815,9.95e-07,2;CL:0000792,9.95e-07,2;CL:0002677,9.95e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;2.97e-36;18!CL:0000051;2.75e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!8.27e-13!15;UBERON:0000179!8.27e-13!15;UBERON:0000463!8.27e-13!15;UBERON:0007023!1.46e-10!115;UBERON:0002390!3.95e-10!102;UBERON:0003061!3.95e-10!102;UBERON:0002193!9.39e-10!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.70e-11;15!UBERON:0000179;3.70e-11;15!UBERON:0000463;3.70e-11;15!UBERON:0002390;1.69e-08;32!UBERON:0004177;1.21e-07;5!UBERON:0005057;1.21e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.65e-11,15;UBERON:0000179,3.65e-11,15;UBERON:0000463,3.65e-11,15;UBERON:0004177,1.67e-08,7;UBERON:0005057,1.67e-08,7;UBERON:0002193,8.17e-08,108;UBERON:0002390,2.08e-07,98;UBERON:0003061,2.08e-07,98 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36018566109342,3.45446458287491,0.619264493264304,0,0,0,0,0,0,2.21598163412751,3.81034450193269,5.64228263861215,2.46307021663917,7.12566065241755,4.89393578504954,0.145398238779565,0,0,0,0.411167888021826,0.309706370895104,0,0.256160706529101,0.47296445977717,0.344745680736619,0,0,0,0,0.224723484445085,0.306083892370903,0,0,0.329851300186716,0,0,0,1.70215567407342,0,0,0,0,0.605399502633369,0.736555271975129,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,5.04457706683382,0,33.6373706894655,41.2661300886623,69.6989081608336,46.6450322139992,177.95355758194,154.343984669523,97.4133642039557,74.422185199296,342.92127630071,301.950698317476,261.054924669475,111.439448161337,126.287626480642,4.27538551969558,4.14525026678773,5.21645554323094,20.6118322795264,18.4603171381902,9.40819714244791,5.21222976408804,55.9501920658805,84.1887241432443,56.1703716283296,9.2383970153988,1.95325036156926,2.85135613334512,5.27012916772205,5.24745105733115,6.24653632761729,6.15620855314444,2.46338399076314,3.42731463482045,2.13952156626806,2.60683926989038,0,0,0,0,0,0,0,0,0,0,0.263504357079378,0.458426764241994,0,0,2.27183175558278,2.61194605948901,3.72282289452822,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0,1.17217447210047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74358444383662,14.2314199407281,9.24069861214188,0,0,0,0,0,1.49801404789436,0,2.07207756718018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.5790094628817,13.8057088523915,12.9140344942168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,2.84823593587081,3.57347663186684,1.23408681925858,1.29694662238543,1.62009431171434,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0.557216921387392,0,0,0,0,0,0,0,0,0,0.996239941255349,10.2225048746525,0,0,0,0,0,0,0,0.197286811273867,4.7896618469388,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0.438770794307945,0,0,0.230850775511391,0,0,0,0,0.957003479195758,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,2.4441205797345,0.889563386041866,0,0.104421949505455,0,0,0,0,0,0,0,3.62972148145992,0,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,1.28071796843612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89176089707246,0.279282401272254,0.229160424011684,0,0,0.429226048136571,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315222829196793,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70859860108311,0.314408610199332,2.48543433208317,7.44249032717926,0.395223263795889,0,0,0,0,0.612691153526923,0,0.157054096250234,0,0,0,0.573409195690071,0,0.18628920882415,0,0,0.151649117541648,5.13837600380941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36402216187572,0.930053882193542,0.163565394255844,0,0,0,3.19979833367888,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0.425149840203366,0.123935764259002,0,0,0,0,0,0,0,0,0,0.41023272848151,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07140367175657,0,0.606965604236632,0,0,0.806637912890455,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0.860454717640555,0,0,0,0,0,0,0,0.588901401691458,0,0,0,0,0,0,9.74858798290704,0,0.90356865631168,0,0.452888530700021,0.463044948647668,0.218559560503957,0.940634592723046,0,0,0.588925401344836,0,0,0,1.59772660565751,2.90060495881097,0,0,0,0,0.730336388246517,0,0.143339583151451,0,0,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,1.49263787330687,0.23806443146374,4.1982791393404,5.33842542944378,0,0.0636471582781649,0.404234377916439,1.95945073107265,0.342233301085281,9.63134358108602,1.57788851863888,0.332660356546013,0,0,0,0,0,0.244482888365733,0,0,4.6292972525936,0 | |||
|short_description=p2@CTLA4 | |||
}} |
Latest revision as of 16:14, 19 September 2015
Short description: | p2@CTLA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CTLA4_5end |
Coexpression cluster: | C103_CD4_CD8_Natural_Peripheral_Whole_Neutrophils_Basophils |
Association with transcript: | 9bp_to_ENST00000541886_5end |
EntrezGene: | CTLA4 |
HGNC: | 2505 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.63e-36 | 18 |
alpha-beta T cell | 2.63e-36 | 18 |
immature T cell | 2.63e-36 | 18 |
mature T cell | 2.63e-36 | 18 |
immature alpha-beta T cell | 2.63e-36 | 18 |
T cell | 3.98e-31 | 25 |
pro-T cell | 3.98e-31 | 25 |
CD8-positive, alpha-beta T cell | 4.69e-24 | 11 |
leukocyte | 2.40e-17 | 136 |
lymphoid lineage restricted progenitor cell | 3.17e-17 | 52 |
lymphocyte | 8.73e-17 | 53 |
common lymphoid progenitor | 8.73e-17 | 53 |
CD4-positive, alpha-beta T cell | 2.39e-16 | 6 |
nongranular leukocyte | 2.92e-16 | 115 |
hematopoietic stem cell | 4.30e-12 | 168 |
hematopoietic lineage restricted progenitor cell | 7.43e-12 | 120 |
hematopoietic cell | 5.63e-11 | 177 |
hematopoietic oligopotent progenitor cell | 2.57e-10 | 161 |
hematopoietic multipotent progenitor cell | 2.57e-10 | 161 |
naive T cell | 3.71e-09 | 3 |
single nucleate cell | 1.18e-08 | 3 |
mononuclear cell | 1.18e-08 | 3 |
natural killer cell | 2.55e-08 | 3 |
pro-NK cell | 2.55e-08 | 3 |
adult endothelial progenitor cell | 6.75e-08 | 3 |
regulatory T cell | 9.95e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 9.95e-07 | 2 |
naive regulatory T cell | 9.95e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 3.65e-11 | 15 |
haemolymphatic fluid | 3.65e-11 | 15 |
organism substance | 3.65e-11 | 15 |
hemopoietic organ | 1.67e-08 | 7 |
immune organ | 1.67e-08 | 7 |
hemolymphoid system | 8.17e-08 | 108 |
hematopoietic system | 2.08e-07 | 98 |
blood island | 2.08e-07 | 98 |