FFCP PHASE1:Hg19::chr9:15306169..15306172,+: Difference between revisions
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|id=chr9:15306169..15306172,+
|short_description=p@chr9:15306169..15306172,+
|description=CAGE_peak_at_chr9:15306169..15306172,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:15306169..15306172,+ | |||
|coexpression_cluster_id=C432 | |||
|description=CAGE_peak_at_chr9:15306169..15306172,+ | |||
|id=chr9:15306169..15306172,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.02e-19!42;CL:0000860!5.39e-18!45;CL:0000839!1.73e-17!70;CL:0000557!3.30e-17!71;CL:0002194!6.34e-17!63;CL:0000576!6.34e-17!63;CL:0000040!6.34e-17!63;CL:0000559!6.34e-17!63;CL:0002009!2.45e-16!65;CL:0000766!6.44e-16!76;CL:0002031!7.51e-12!124;CL:0000738!1.30e-11!140;CL:0000763!1.37e-11!112;CL:0000049!1.37e-11!112;CL:0002087!7.66e-11!119;CL:0000037!3.91e-10!172;CL:0000566!3.91e-10!172;CL:0000988!2.17e-09!182;CL:0002032!2.27e-09!165;CL:0000837!2.27e-09!165;CL:0000810!1.27e-08!1;CL:0000895!1.27e-08!1;CL:0002436!1.27e-08!1;CL:0002427!1.27e-08!1;CL:0002428!1.27e-08!1;CL:0002429!1.27e-08!1;CL:0002433!1.27e-08!1;CL:0002431!1.27e-08!1;CL:0002432!1.27e-08!1;CL:0001024!1.59e-08!1;CL:0002563!4.08e-08!4;CL:0000990!1.87e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.60e-22;33!CL:0002057;9.60e-22;33!CL:0000473;3.06e-15;39!CL:0000234;3.06e-15;39!CL:0000576;4.09e-09;48!CL:0000766;4.31e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.19e-19,42;CL:0002057,1.19e-19,42;CL:0000473,2.57e-17,48;CL:0000234,2.57e-17,48;CL:0002194,4.87e-14,59;CL:0000576,4.87e-14,59;CL:0000040,4.87e-14,59;CL:0000559,4.87e-14,59;CL:0002009,1.29e-13,61;CL:0000839,1.15e-12,66;CL:0000557,1.71e-12,67;CL:0000766,1.07e-11,72;CL:0000763,4.22e-08,108;CL:0000049,4.22e-08,108;CL:0002087,1.17e-07,115;CL:0002031,2.26e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;5.77e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.29e-17!80;UBERON:0002390!4.44e-17!102;UBERON:0003061!4.44e-17!102;UBERON:0001474!5.71e-16!86;UBERON:0002193!2.82e-15!112;UBERON:0002405!8.52e-15!115;UBERON:0004765!3.39e-13!101;UBERON:0001434!3.39e-13!101;UBERON:0001242!4.08e-08!4;UBERON:0001262!4.08e-08!4;UBERON:0004786!4.08e-08!4;UBERON:0004808!4.08e-08!4;UBERON:0001277!4.08e-08!4;UBERON:0002204!6.85e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.92e-11,76;UBERON:0001474,2.17e-10,82;UBERON:0004765,1.51e-09,90;UBERON:0002405,2.87e-09,93;UBERON:0002390,7.68e-09,98;UBERON:0003061,7.68e-09,98;UBERON:0001434,1.11e-08,100;UBERON:0002193,4.22e-08,108 | |||
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|short_description=p@chr9:15306169..15306172,+ | |||
}} | }} |
Latest revision as of 00:51, 1 August 2015
Short description: | p@chr9:15306169..15306172, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:15306169..15306172, + |
Coexpression cluster: | C432_CD14_choriocarcinoma_Peripheral_CD34_Mast_Fibroblast_granulocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.19e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.19e-19 | 42 |
defensive cell | 2.57e-17 | 48 |
phagocyte | 2.57e-17 | 48 |
monopoietic cell | 4.87e-14 | 59 |
monocyte | 4.87e-14 | 59 |
monoblast | 4.87e-14 | 59 |
promonocyte | 4.87e-14 | 59 |
macrophage dendritic cell progenitor | 1.29e-13 | 61 |
myeloid lineage restricted progenitor cell | 1.15e-12 | 66 |
granulocyte monocyte progenitor cell | 1.71e-12 | 67 |
myeloid leukocyte | 1.07e-11 | 72 |
myeloid cell | 4.22e-08 | 108 |
common myeloid progenitor | 4.22e-08 | 108 |
nongranular leukocyte | 1.17e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 2.26e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.92e-11 | 76 |
bone element | 2.17e-10 | 82 |
skeletal element | 1.51e-09 | 90 |
immune system | 2.87e-09 | 93 |
hematopoietic system | 7.68e-09 | 98 |
blood island | 7.68e-09 | 98 |
skeletal system | 1.11e-08 | 100 |
hemolymphoid system | 4.22e-08 | 108 |