FFCP PHASE1:Mm9::chr11:23976906..23976924,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=459|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:23976906..23976924,+|id=chr11:23976906..23976924,+|ontology_enrichment_celltype=CL:0000117!3.19e-08!23;CL:0000337!3.19e-08!23;CL:0002609!5.58e-08!6|ontology_enrichment_celltype_v019_2=CL:0002609,3.63e-17,6;CL:0002608,8.79e-16,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!1.59e-16!34;UBERON:0002791!7.48e-14!29;UBERON:0003528!7.48e-14!29;UBERON:0001893!7.48e-14!29;UBERON:0000956!2.26e-12!21;UBERON:0001869!2.26e-12!21;UBERON:0000203!2.26e-12!21;UBERON:0002780!2.23e-11!39;UBERON:0001890!2.23e-11!39;UBERON:0006240!2.23e-11!39;UBERON:0001049!3.95e-11!52;UBERON:0005068!3.95e-11!52;UBERON:0006241!3.95e-11!52;UBERON:0007135!3.95e-11!52;UBERON:0003080!6.81e-11!40;UBERON:0000955!6.51e-09!50;UBERON:0006238!6.51e-09!50;UBERON:0002619!1.24e-08!17;UBERON:0002616!3.45e-08!49;UBERON:0003056!3.55e-08!49;UBERON:0001017!1.19e-07!73;UBERON:0005743!1.19e-07!73;UBERON:0000073!3.37e-07!75;UBERON:0001016!3.37e-07!75|ontology_enrichment_uberon_v019_2=UBERON:0001954,5.81e-15,7;UBERON:0003022,5.81e-15,7;UBERON:0002421,5.81e-15,7;UBERON:0000349,5.81e-15,7;UBERON:0002600,5.81e-15,7;UBERON:0003528,8.94e-14,29;UBERON:0002791,8.94e-14,29;UBERON:0001893,8.94e-14,29;UBERON:0000956,2.76e-13,21;UBERON:0001869,2.76e-13,21;UBERON:0000203,2.76e-13,21;UBERON:0001851,7.11e-12,1;UBERON:0005889,7.11e-12,1;UBERON:0002020,9.17e-12,34;UBERON:0000955,1.78e-11,47;UBERON:0006238,1.78e-11,47;UBERON:0002619,8.63e-11,17;UBERON:0002780,2.90e-10,39;UBERON:0001890,2.90e-10,39;UBERON:0006240,2.90e-10,39;UBERON:0003080,5.22e-10,40;UBERON:0002616,1.05e-08,46;UBERON:0003056,3.58e-08,49;UBERON:0001049,1.06e-07,52;UBERON:0005068,1.06e-07,52;UBERON:0006241,1.06e-07,52;UBERON:0007135,1.06e-07,52;UBERON:0000073,2.06e-07,54;UBERON:0001017,2.35e-07,73;UBERON:0001016,3.72e-07,75|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0.699561878128147,0.157731082679119,0,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,0,0,0,0,0,0.606949382578793,0.528990979272033,0,0,0,0,0,0,0,0,0.725827286159344,1.21505344498522,0.420649922702764,0.571301968807607,0,1.71487118900936,1.62937300731002,0.919218786610021,0,0,0,0.131886287730194,0.274462930807229,0.52091337055676,0,0,0,0.589257170947335,0.284743361598206,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127070227073065,0,0.457500602818626,5.27748278874031,0.869121600961382,1.02286182932132,0.20778804455956,0.162241263067758,0,0.124406970610093,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0.189106080167819,0.351902248327898,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,1.64647379806855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0.196558995113203,0.224862112384854,0.608580364165509,0,0,0,0,0,0,0,0.312037673114561,0,0.179397413521912,0,0,0.189491411770485,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,1.60660658210904,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0.484393280087717,0.482503399425247,0,0,0,0,0.170870880797853,0,0,0,0,0,0.169978429993855,0.139951452323658,0.138199973804424,0,0,0,0.216010681643603,0,0,0,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0.564751842617067,0.460325236507177,0.572895513439397,0.515559547031063,0,0,0,0.900642406448441,0.453142408984205,1.03552062350364,0,0.399024873401031,0.341467211508268,0,0.209613162627982,0.183843508450014,0.44449345560323,0.206035057238894,0.320919209591815,0.252697211763798,0.760437899670719,0.377252682772152,0.0936415074698824,0.128050304809739,0.229741875822453,0,0.115884325944855,0.192909220463705,0,0.294397840268795,0,0,0,0.290692833264657,0.188218760830661,0.676916863133412,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0.385813221962283,0.749431733813838,0.467863216890817,0.429742108096597,0.382576664137687,0,0|short_description=p@chr11:23976906..23976924,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=459 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:23976906..23976924,+ | |||
|description=CAGE_peak_at_chr11:23976906..23976924,+ | |||
|id=chr11:23976906..23976924,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.19e-08!23;CL:0000337!3.19e-08!23;CL:0002609!5.58e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,3.63e-17,6;CL:0002608,8.79e-16,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!1.59e-16!34;UBERON:0002791!7.48e-14!29;UBERON:0003528!7.48e-14!29;UBERON:0001893!7.48e-14!29;UBERON:0000956!2.26e-12!21;UBERON:0001869!2.26e-12!21;UBERON:0000203!2.26e-12!21;UBERON:0002780!2.23e-11!39;UBERON:0001890!2.23e-11!39;UBERON:0006240!2.23e-11!39;UBERON:0001049!3.95e-11!52;UBERON:0005068!3.95e-11!52;UBERON:0006241!3.95e-11!52;UBERON:0007135!3.95e-11!52;UBERON:0003080!6.81e-11!40;UBERON:0000955!6.51e-09!50;UBERON:0006238!6.51e-09!50;UBERON:0002619!1.24e-08!17;UBERON:0002616!3.45e-08!49;UBERON:0003056!3.55e-08!49;UBERON:0001017!1.19e-07!73;UBERON:0005743!1.19e-07!73;UBERON:0000073!3.37e-07!75;UBERON:0001016!3.37e-07!75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,5.81e-15,7;UBERON:0003022,5.81e-15,7;UBERON:0002421,5.81e-15,7;UBERON:0000349,5.81e-15,7;UBERON:0002600,5.81e-15,7;UBERON:0003528,8.94e-14,29;UBERON:0002791,8.94e-14,29;UBERON:0001893,8.94e-14,29;UBERON:0000956,2.76e-13,21;UBERON:0001869,2.76e-13,21;UBERON:0000203,2.76e-13,21;UBERON:0001851,7.11e-12,1;UBERON:0005889,7.11e-12,1;UBERON:0002020,9.17e-12,34;UBERON:0000955,1.78e-11,47;UBERON:0006238,1.78e-11,47;UBERON:0002619,8.63e-11,17;UBERON:0002780,2.90e-10,39;UBERON:0001890,2.90e-10,39;UBERON:0006240,2.90e-10,39;UBERON:0003080,5.22e-10,40;UBERON:0002616,1.05e-08,46;UBERON:0003056,3.58e-08,49;UBERON:0001049,1.06e-07,52;UBERON:0005068,1.06e-07,52;UBERON:0006241,1.06e-07,52;UBERON:0007135,1.06e-07,52;UBERON:0000073,2.06e-07,54;UBERON:0001017,2.35e-07,73;UBERON:0001016,3.72e-07,75 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0.699561878128147,0.157731082679119,0,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,0,0,0,0,0,0.606949382578793,0.528990979272033,0,0,0,0,0,0,0,0,0.725827286159344,1.21505344498522,0.420649922702764,0.571301968807607,0,1.71487118900936,1.62937300731002,0.919218786610021,0,0,0,0.131886287730194,0.274462930807229,0.52091337055676,0,0,0,0.589257170947335,0.284743361598206,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127070227073065,0,0.457500602818626,5.27748278874031,0.869121600961382,1.02286182932132,0.20778804455956,0.162241263067758,0,0.124406970610093,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0.189106080167819,0.351902248327898,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,1.64647379806855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0.196558995113203,0.224862112384854,0.608580364165509,0,0,0,0,0,0,0,0.312037673114561,0,0.179397413521912,0,0,0.189491411770485,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,1.60660658210904,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0.484393280087717,0.482503399425247,0,0,0,0,0.170870880797853,0,0,0,0,0,0.169978429993855,0.139951452323658,0.138199973804424,0,0,0,0.216010681643603,0,0,0,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0.564751842617067,0.460325236507177,0.572895513439397,0.515559547031063,0,0,0,0.900642406448441,0.453142408984205,1.03552062350364,0,0.399024873401031,0.341467211508268,0,0.209613162627982,0.183843508450014,0.44449345560323,0.206035057238894,0.320919209591815,0.252697211763798,0.760437899670719,0.377252682772152,0.0936415074698824,0.128050304809739,0.229741875822453,0,0.115884325944855,0.192909220463705,0,0.294397840268795,0,0,0,0.290692833264657,0.188218760830661,0.676916863133412,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.154936841185966,0.385813221962283,0.749431733813838,0.467863216890817,0.429742108096597,0.382576664137687,0,0 | |||
|short_description=p@chr11:23976906..23976924,+ | |||
}} |
Latest revision as of 18:14, 5 August 2015
Short description: | p@chr11:23976906..23976924, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:23976906..23976924, + |
Coexpression cluster: | MCL_coexpression_mm9:459 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 3.63e-17 | 6 |
hippocampal neuron | 8.79e-16 | 3 |
Ontology term | p-value | n |
---|---|---|
Ammon's horn | 5.81e-15 | 7 |
lobe parts of cerebral cortex | 5.81e-15 | 7 |
hippocampal formation | 5.81e-15 | 7 |
limbic system | 5.81e-15 | 7 |
limbic lobe | 5.81e-15 | 7 |
brain grey matter | 8.94e-14 | 29 |
regional part of telencephalon | 8.94e-14 | 29 |
telencephalon | 8.94e-14 | 29 |
cerebral cortex | 2.76e-13 | 21 |
cerebral hemisphere | 2.76e-13 | 21 |
pallium | 2.76e-13 | 21 |
cortex | 7.11e-12 | 1 |
zygote cortex | 7.11e-12 | 1 |
gray matter | 9.17e-12 | 34 |
brain | 1.78e-11 | 47 |
future brain | 1.78e-11 | 47 |
regional part of cerebral cortex | 8.63e-11 | 17 |
regional part of forebrain | 2.90e-10 | 39 |
forebrain | 2.90e-10 | 39 |
future forebrain | 2.90e-10 | 39 |
anterior neural tube | 5.22e-10 | 40 |
regional part of brain | 1.05e-08 | 46 |
pre-chordal neural plate | 3.58e-08 | 49 |
neural tube | 1.06e-07 | 52 |
neural rod | 1.06e-07 | 52 |
future spinal cord | 1.06e-07 | 52 |
neural keel | 1.06e-07 | 52 |
regional part of nervous system | 2.06e-07 | 54 |
central nervous system | 2.35e-07 | 73 |
nervous system | 3.72e-07 | 75 |