FFCP PHASE1:Mm9::chr11:33947321..33947326,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=16822|HGNC=|MCL_coexpression_id=7|UniProt=Q60787,Q8CAS1|association_with_transcript=120bp_to_NM_010696,uc007iku.1,uc007ikv.1_5end|description=CAGE_peak_7_at_Lcp2_5end|id=chr11:33947321..33947326,+|ontology_enrichment_celltype=CL:0000791!4.29e-16!9;CL:0000789!4.29e-16!9;CL:0002420!4.29e-16!9;CL:0002419!4.29e-16!9;CL:0000790!4.29e-16!9;CL:0000624!2.28e-14!8;CL:0000084!9.13e-13!11;CL:0000827!9.13e-13!11;CL:0000838!1.61e-11!12;CL:0000893!3.03e-11!6;CL:0002489!3.03e-11!6;CL:0000898!3.03e-11!6;CL:0000809!3.03e-11!6;CL:0000810!3.03e-11!6;CL:0000895!3.03e-11!6;CL:0000808!3.03e-11!6;CL:0000894!3.03e-11!6;CL:0000806!3.03e-11!6;CL:0000807!3.03e-11!6;CL:0000805!3.03e-11!6;CL:0002425!3.03e-11!6;CL:0002436!3.03e-11!6;CL:0002427!3.03e-11!6;CL:0002428!3.03e-11!6;CL:0002429!3.03e-11!6;CL:0002433!3.03e-11!6;CL:0002431!3.03e-11!6;CL:0002432!3.03e-11!6;CL:0000542!1.81e-10!13;CL:0000051!1.81e-10!13;CL:0000738!2.44e-09!17;CL:0002087!2.44e-09!17;CL:0000988!3.65e-09!32;CL:0002032!3.65e-09!32;CL:0000037!3.65e-09!32;CL:0000566!3.65e-09!32;CL:0000837!3.65e-09!32;CL:0002031!5.43e-08!25|ontology_enrichment_celltype_v019_2=CL:0000791,5.09e-35,9;CL:0000789,5.09e-35,9;CL:0002420,5.09e-35,9;CL:0002419,5.09e-35,9;CL:0000790,5.09e-35,9;CL:0000893,4.28e-34,6;CL:0002489,4.28e-34,6;CL:0000898,4.28e-34,6;CL:0000809,4.28e-34,6;CL:0000810,4.28e-34,6;CL:0000895,4.28e-34,6;CL:0000808,4.28e-34,6;CL:0000894,4.28e-34,6;CL:0000806,4.28e-34,6;CL:0000807,4.28e-34,6;CL:0000805,4.28e-34,6;CL:0002425,4.28e-34,6;CL:0002436,4.28e-34,6;CL:0002427,4.28e-34,6;CL:0002428,4.28e-34,6;CL:0002429,4.28e-34,6;CL:0002433,4.28e-34,6;CL:0002431,4.28e-34,6;CL:0002432,4.28e-34,6;CL:0000084,9.39e-29,11;CL:0000827,9.39e-29,11;CL:0000838,2.11e-26,12;CL:0000624,9.55e-26,8;CL:0000542,2.07e-24,13;CL:0000051,2.07e-24,13;CL:0000738,8.93e-19,17;CL:0002087,8.93e-19,17;CL:0000625,2.06e-13,1;CL:0002031,6.83e-13,25;CL:0000988,3.85e-10,32;CL:0002032,3.85e-10,32;CL:0000037,3.85e-10,32;CL:0000837,3.85e-10,32;CL:0002320,3.97e-07,46;CL:0000134,3.97e-07,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!2.91e-23!29;UBERON:0002370!2.10e-18!23;UBERON:0000974!2.10e-18!23;UBERON:0004807!2.10e-18!23;UBERON:0005058!2.10e-18!23;UBERON:0003351!2.10e-18!23;UBERON:0009113!2.10e-18!23;UBERON:0003295!2.10e-18!23;UBERON:0009722!2.10e-18!23;UBERON:0005562!2.10e-18!23;UBERON:0007690!2.10e-18!23;UBERON:0002193!1.51e-17!48;UBERON:0006562!1.94e-17!24;UBERON:0003408!1.94e-17!24;UBERON:0001557!1.94e-17!24;UBERON:0001042!1.94e-17!24;UBERON:0008814!1.94e-17!24;UBERON:0009145!1.94e-17!24;UBERON:0002390!2.36e-17!45;UBERON:0003061!2.36e-17!45;UBERON:0000072!5.65e-15!27;UBERON:0000063!6.12e-12!35;UBERON:0005057!6.74e-12!51;UBERON:0002405!6.50e-11!70;UBERON:0000065!1.19e-10!41;UBERON:0001004!2.80e-10!42;UBERON:0003081!6.12e-09!88|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.66e-09,23;UBERON:0000974,2.66e-09,23;UBERON:0004807,2.66e-09,23;UBERON:0005058,2.66e-09,23;UBERON:0003351,2.66e-09,23;UBERON:0009113,2.66e-09,23;UBERON:0003295,2.66e-09,23;UBERON:0009722,2.66e-09,23;UBERON:0005562,2.66e-09,23;UBERON:0007690,2.66e-09,23;UBERON:0006562,6.22e-09,24;UBERON:0003408,6.22e-09,24;UBERON:0001557,6.22e-09,24;UBERON:0001042,6.22e-09,24;UBERON:0008814,6.22e-09,24;UBERON:0009145,6.22e-09,24;UBERON:0000072,5.51e-08,27;UBERON:0004177,1.84e-07,29;UBERON:0005057,1.84e-07,29;UBERON:0002384,3.97e-07,46|phase1_expression=0,0,0,0,0,0,0,0.516493293766305,11.6854639385883,19.1932911584035,3.5955773327356,5.02564601670619,0.171200729931206,0.437102012094987,0,0,0,0.157731082679119,0.274228867211478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837063261473815,0,0,1.17646297606203,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0.725362142011344,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.776813650941515,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0.220841518460394,0,0,0,0,0.255457055208591,0.239630249011841,0.599902730993408,0.254140454146129,0,0,0,0,0,0.20778804455956,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0.333690211432188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0,0.144649058581512,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0.370389054739423,0.188368457004691,0.136694227721025,0.228778173206523,1.01987057996313,0.979660166265606,0.829199842826543,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0.405450430580328,0,0.25984164595559,0.179026695667481,0,0.240390899039938,0.295379054349154,0.403865799792591,0.304827226619999,0.604957110821043,0.974578807397524,0.192423683280659,0.467507608726276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0.206035057238894,0,0,0,0,0,0.128050304809739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p7@Lcp2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16822 | |||
|HGNC= | |||
|MCL_coexpression_id=7 | |||
|TSSclassifier=NA | |||
|UniProt=Q60787,Q8CAS1 | |||
|association_with_transcript=120bp_to_NM_010696,uc007iku.1,uc007ikv.1_5end | |||
|cluster_id=chr11:33947321..33947326,+ | |||
|description=CAGE_peak_7_at_Lcp2_5end | |||
|id=chr11:33947321..33947326,+ | |||
|ontology_enrichment_celltype=CL:0000791!4.29e-16!9;CL:0000789!4.29e-16!9;CL:0002420!4.29e-16!9;CL:0002419!4.29e-16!9;CL:0000790!4.29e-16!9;CL:0000624!2.28e-14!8;CL:0000084!9.13e-13!11;CL:0000827!9.13e-13!11;CL:0000838!1.61e-11!12;CL:0000893!3.03e-11!6;CL:0002489!3.03e-11!6;CL:0000898!3.03e-11!6;CL:0000809!3.03e-11!6;CL:0000810!3.03e-11!6;CL:0000895!3.03e-11!6;CL:0000808!3.03e-11!6;CL:0000894!3.03e-11!6;CL:0000806!3.03e-11!6;CL:0000807!3.03e-11!6;CL:0000805!3.03e-11!6;CL:0002425!3.03e-11!6;CL:0002436!3.03e-11!6;CL:0002427!3.03e-11!6;CL:0002428!3.03e-11!6;CL:0002429!3.03e-11!6;CL:0002433!3.03e-11!6;CL:0002431!3.03e-11!6;CL:0002432!3.03e-11!6;CL:0000542!1.81e-10!13;CL:0000051!1.81e-10!13;CL:0000738!2.44e-09!17;CL:0002087!2.44e-09!17;CL:0000988!3.65e-09!32;CL:0002032!3.65e-09!32;CL:0000037!3.65e-09!32;CL:0000566!3.65e-09!32;CL:0000837!3.65e-09!32;CL:0002031!5.43e-08!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.09e-35,9;CL:0000789,5.09e-35,9;CL:0002420,5.09e-35,9;CL:0002419,5.09e-35,9;CL:0000790,5.09e-35,9;CL:0000893,4.28e-34,6;CL:0002489,4.28e-34,6;CL:0000898,4.28e-34,6;CL:0000809,4.28e-34,6;CL:0000810,4.28e-34,6;CL:0000895,4.28e-34,6;CL:0000808,4.28e-34,6;CL:0000894,4.28e-34,6;CL:0000806,4.28e-34,6;CL:0000807,4.28e-34,6;CL:0000805,4.28e-34,6;CL:0002425,4.28e-34,6;CL:0002436,4.28e-34,6;CL:0002427,4.28e-34,6;CL:0002428,4.28e-34,6;CL:0002429,4.28e-34,6;CL:0002433,4.28e-34,6;CL:0002431,4.28e-34,6;CL:0002432,4.28e-34,6;CL:0000084,9.39e-29,11;CL:0000827,9.39e-29,11;CL:0000838,2.11e-26,12;CL:0000624,9.55e-26,8;CL:0000542,2.07e-24,13;CL:0000051,2.07e-24,13;CL:0000738,8.93e-19,17;CL:0002087,8.93e-19,17;CL:0000625,2.06e-13,1;CL:0002031,6.83e-13,25;CL:0000988,3.85e-10,32;CL:0002032,3.85e-10,32;CL:0000037,3.85e-10,32;CL:0000837,3.85e-10,32;CL:0002320,3.97e-07,46;CL:0000134,3.97e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!2.91e-23!29;UBERON:0002370!2.10e-18!23;UBERON:0000974!2.10e-18!23;UBERON:0004807!2.10e-18!23;UBERON:0005058!2.10e-18!23;UBERON:0003351!2.10e-18!23;UBERON:0009113!2.10e-18!23;UBERON:0003295!2.10e-18!23;UBERON:0009722!2.10e-18!23;UBERON:0005562!2.10e-18!23;UBERON:0007690!2.10e-18!23;UBERON:0002193!1.51e-17!48;UBERON:0006562!1.94e-17!24;UBERON:0003408!1.94e-17!24;UBERON:0001557!1.94e-17!24;UBERON:0001042!1.94e-17!24;UBERON:0008814!1.94e-17!24;UBERON:0009145!1.94e-17!24;UBERON:0002390!2.36e-17!45;UBERON:0003061!2.36e-17!45;UBERON:0000072!5.65e-15!27;UBERON:0000063!6.12e-12!35;UBERON:0005057!6.74e-12!51;UBERON:0002405!6.50e-11!70;UBERON:0000065!1.19e-10!41;UBERON:0001004!2.80e-10!42;UBERON:0003081!6.12e-09!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.66e-09,23;UBERON:0000974,2.66e-09,23;UBERON:0004807,2.66e-09,23;UBERON:0005058,2.66e-09,23;UBERON:0003351,2.66e-09,23;UBERON:0009113,2.66e-09,23;UBERON:0003295,2.66e-09,23;UBERON:0009722,2.66e-09,23;UBERON:0005562,2.66e-09,23;UBERON:0007690,2.66e-09,23;UBERON:0006562,6.22e-09,24;UBERON:0003408,6.22e-09,24;UBERON:0001557,6.22e-09,24;UBERON:0001042,6.22e-09,24;UBERON:0008814,6.22e-09,24;UBERON:0009145,6.22e-09,24;UBERON:0000072,5.51e-08,27;UBERON:0004177,1.84e-07,29;UBERON:0005057,1.84e-07,29;UBERON:0002384,3.97e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0.516493293766305,11.6854639385883,19.1932911584035,3.5955773327356,5.02564601670619,0.171200729931206,0.437102012094987,0,0,0,0.157731082679119,0.274228867211478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837063261473815,0,0,1.17646297606203,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0.725362142011344,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.776813650941515,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0.220841518460394,0,0,0,0,0.255457055208591,0.239630249011841,0.599902730993408,0.254140454146129,0,0,0,0,0,0.20778804455956,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0.333690211432188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0,0.144649058581512,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0.370389054739423,0.188368457004691,0.136694227721025,0.228778173206523,1.01987057996313,0.979660166265606,0.829199842826543,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0.405450430580328,0,0.25984164595559,0.179026695667481,0,0.240390899039938,0.295379054349154,0.403865799792591,0.304827226619999,0.604957110821043,0.974578807397524,0.192423683280659,0.467507608726276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0.206035057238894,0,0,0,0,0,0.128050304809739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p7@Lcp2 | |||
}} |
Latest revision as of 07:56, 27 September 2015
Short description: | p7@Lcp2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Lcp2_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | 120bp_to_NM_010696, uc007iku.1, uc007ikv.1_5end |
EntrezGene: | Lcp2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 2.66e-09 | 23 |
neck | 2.66e-09 | 23 |
respiratory system epithelium | 2.66e-09 | 23 |
hemolymphoid system gland | 2.66e-09 | 23 |
pharyngeal epithelium | 2.66e-09 | 23 |
thymic region | 2.66e-09 | 23 |
pharyngeal gland | 2.66e-09 | 23 |
entire pharyngeal arch endoderm | 2.66e-09 | 23 |
thymus primordium | 2.66e-09 | 23 |
early pharyngeal endoderm | 2.66e-09 | 23 |
pharynx | 6.22e-09 | 24 |
gland of gut | 6.22e-09 | 24 |
upper respiratory tract | 6.22e-09 | 24 |
chordate pharynx | 6.22e-09 | 24 |
pharyngeal arch system | 6.22e-09 | 24 |
pharyngeal region of foregut | 6.22e-09 | 24 |
segment of respiratory tract | 5.51e-08 | 27 |
hemopoietic organ | 1.84e-07 | 29 |
immune organ | 1.84e-07 | 29 |
connective tissue | 3.97e-07 | 46 |