FFCP PHASE1:Mm9::chr11:54776375..54776376,-: Difference between revisions
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{{FFCP|EntrezGene=57783|HGNC=|MCL_coexpression_id=58|UniProt=Q9WUU8|association_with_transcript=34bp_to_ENSMUST00000108885,ENSMUST00000132776_5end|description=CAGE_peak_6_at_Tnip1_5end|id=chr11:54776375..54776376,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000473,3.61e-21,7;CL:0000682,3.93e-19,3;CL:0000239,1.74e-16,6;CL:0000677,1.74e-16,6;CL:0000584,1.74e-16,6;CL:0000066,8.76e-15,25;CL:0000075,3.60e-14,7;CL:0002476,3.65e-12,2;CL:0002563,4.50e-11,9;CL:0002251,4.50e-11,9;CL:0000223,1.76e-07,20;CL:0000213,3.67e-07,1;CL:0002078,3.67e-07,1;CL:0000115,3.67e-07,1;CL:0002262,3.67e-07,1;CL:1000398,3.67e-07,1;CL:0000815,7.23e-07,1;CL:0000792,7.23e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!2.08e-07!48|ontology_enrichment_uberon_v019_2=UBERON:0000344,4.47e-14,15;UBERON:0001242,1.60e-11,13;UBERON:0001262,1.60e-11,13;UBERON:0004786,1.60e-11,13;UBERON:0003350,4.50e-11,9;UBERON:0004808,4.50e-11,9;UBERON:0001277,4.50e-11,9;UBERON:0000485,4.27e-09,11;UBERON:0004923,1.15e-08,24;UBERON:0002394,3.67e-07,1;UBERON:0001281,3.67e-07,1;UBERON:0000353,3.67e-07,1;UBERON:0003497,3.67e-07,1;UBERON:0003909,3.67e-07,1;UBERON:0003928,3.67e-07,1;UBERON:0003835,3.67e-07,1;UBERON:0003513,3.67e-07,1;UBERON:0001280,3.67e-07,1;UBERON:0004647,3.67e-07,1;UBERON:0002294,3.67e-07,1;UBERON:0001173,3.67e-07,1;UBERON:0004912,3.67e-07,1;UBERON:0005171,3.67e-07,1|phase1_expression=0,5.23463111459042,5.91499011206397,0,0,2.18243053485457,1.63528848416868,1.16210991097419,0,0,0,0,0,0.174840804837995,0,0,0,0,0,0,0.0850432901510698,0,0,2.07990149631429,0.91763712426868,2.8711598205751,5.59990595006797,4.74036711908956,0,0,1.55211357458713,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.367093504323363,0,0,0,0,0,0,0,0,0,0.257259436035947,0.286533439938757,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73918693221007,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0,0.258937883647172,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479260498023681,0.599902730993408,0.762421362438388,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50791283939272,1.08781136763742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0,0,0,0,0.0603129249281559,0,0,0,0,0.170870880797853,0,0,0,0,0,2.37969801991397,0.979660166265606,1.38199973804424,0,0,0,0,0,0,0,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0.316011120628178,0.202725215290164,0.513554785824136,0,0,0,0.360586348559907,0.147689527174577,0.201932899896295,0.0762068066549998,0.201652370273681,0.194915761479505,0.192423683280659,0.116876902181569,0,0.443971906748129,0,0.167884616364078,0,0.375364950902364,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0.188626341386076,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p6@Tnip1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=57783 | |||
|HGNC= | |||
|MCL_coexpression_id=58 | |||
|TSSclassifier=NA | |||
|UniProt=Q9WUU8 | |||
|association_with_transcript=34bp_to_ENSMUST00000108885,ENSMUST00000132776_5end | |||
|cluster_id=chr11:54776375..54776376,- | |||
|description=CAGE_peak_6_at_Tnip1_5end | |||
|id=chr11:54776375..54776376,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.61e-21,7;CL:0000682,3.93e-19,3;CL:0000239,1.74e-16,6;CL:0000677,1.74e-16,6;CL:0000584,1.74e-16,6;CL:0000066,8.76e-15,25;CL:0000075,3.60e-14,7;CL:0002476,3.65e-12,2;CL:0002563,4.50e-11,9;CL:0002251,4.50e-11,9;CL:0000223,1.76e-07,20;CL:0000213,3.67e-07,1;CL:0002078,3.67e-07,1;CL:0000115,3.67e-07,1;CL:0002262,3.67e-07,1;CL:1000398,3.67e-07,1;CL:0000815,7.23e-07,1;CL:0000792,7.23e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.08e-07!48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,4.47e-14,15;UBERON:0001242,1.60e-11,13;UBERON:0001262,1.60e-11,13;UBERON:0004786,1.60e-11,13;UBERON:0003350,4.50e-11,9;UBERON:0004808,4.50e-11,9;UBERON:0001277,4.50e-11,9;UBERON:0000485,4.27e-09,11;UBERON:0004923,1.15e-08,24;UBERON:0002394,3.67e-07,1;UBERON:0001281,3.67e-07,1;UBERON:0000353,3.67e-07,1;UBERON:0003497,3.67e-07,1;UBERON:0003909,3.67e-07,1;UBERON:0003928,3.67e-07,1;UBERON:0003835,3.67e-07,1;UBERON:0003513,3.67e-07,1;UBERON:0001280,3.67e-07,1;UBERON:0004647,3.67e-07,1;UBERON:0002294,3.67e-07,1;UBERON:0001173,3.67e-07,1;UBERON:0004912,3.67e-07,1;UBERON:0005171,3.67e-07,1 | |||
|phase1_expression=0,5.23463111459042,5.91499011206397,0,0,2.18243053485457,1.63528848416868,1.16210991097419,0,0,0,0,0,0.174840804837995,0,0,0,0,0,0,0.0850432901510698,0,0,2.07990149631429,0.91763712426868,2.8711598205751,5.59990595006797,4.74036711908956,0,0,1.55211357458713,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0.367093504323363,0,0,0,0,0,0,0,0,0,0.257259436035947,0.286533439938757,0,0,0,0,0,0,0.449949858640699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73918693221007,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0,0.258937883647172,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.479260498023681,0.599902730993408,0.762421362438388,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50791283939272,1.08781136763742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0,0,0,0,0.0603129249281559,0,0,0,0,0.170870880797853,0,0,0,0,0,2.37969801991397,0.979660166265606,1.38199973804424,0,0,0,0,0,0,0,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0.316011120628178,0.202725215290164,0.513554785824136,0,0,0,0.360586348559907,0.147689527174577,0.201932899896295,0.0762068066549998,0.201652370273681,0.194915761479505,0.192423683280659,0.116876902181569,0,0.443971906748129,0,0.167884616364078,0,0.375364950902364,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0.188626341386076,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@Tnip1 | |||
}} |
Latest revision as of 17:31, 1 October 2015
Short description: | p6@Tnip1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Tnip1_5end |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | 34bp_to_ENSMUST00000108885, ENSMUST00000132776_5end |
EntrezGene: | Tnip1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.61e-21 | 7 |
M cell of gut | 3.93e-19 | 3 |
brush border epithelial cell | 1.74e-16 | 6 |
gut absorptive cell | 1.74e-16 | 6 |
enterocyte | 1.74e-16 | 6 |
epithelial cell | 8.76e-15 | 25 |
columnar/cuboidal epithelial cell | 3.60e-14 | 7 |
bone marrow macrophage | 3.65e-12 | 2 |
intestinal epithelial cell | 4.50e-11 | 9 |
epithelial cell of alimentary canal | 4.50e-11 | 9 |
endodermal cell | 1.76e-07 | 20 |
lining cell | 3.67e-07 | 1 |
meso-epithelial cell | 3.67e-07 | 1 |
endothelial cell | 3.67e-07 | 1 |
endothelial cell of sinusoid | 3.67e-07 | 1 |
endothelial cell of hepatic sinusoid | 3.67e-07 | 1 |
regulatory T cell | 7.23e-07 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 7.23e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
mucosa | 4.47e-14 | 15 |
intestinal mucosa | 1.60e-11 | 13 |
wall of intestine | 1.60e-11 | 13 |
gastrointestinal system mucosa | 1.60e-11 | 13 |
epithelium of mucosa | 4.50e-11 | 9 |
gastrointestinal system epithelium | 4.50e-11 | 9 |
intestinal epithelium | 4.50e-11 | 9 |
simple columnar epithelium | 4.27e-09 | 11 |
organ component layer | 1.15e-08 | 24 |
bile duct | 3.67e-07 | 1 |
hepatic sinusoid | 3.67e-07 | 1 |
parenchyma | 3.67e-07 | 1 |
abdomen blood vessel | 3.67e-07 | 1 |
sinusoid | 3.67e-07 | 1 |
digestive system duct | 3.67e-07 | 1 |
abdominal segment blood vessel | 3.67e-07 | 1 |
trunk blood vessel | 3.67e-07 | 1 |
liver parenchyma | 3.67e-07 | 1 |
liver lobule | 3.67e-07 | 1 |
biliary system | 3.67e-07 | 1 |
biliary tree | 3.67e-07 | 1 |
biliary bud | 3.67e-07 | 1 |
hepatic duct | 3.67e-07 | 1 |