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FFCP PHASE1:Mm9::chr11:77161761..77161771,+: Difference between revisions

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{{FFCP|EntrezGene=237860|HGNC=|MCL_coexpression_id=1503|UniProt=Q5SW75|association_with_transcript=-10bp_to_uc007kgn.1,uc007kgo.1_5end|description=CAGE_peak_3_at_Ssh2_5end|id=chr11:77161761..77161771,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000926!4.38e-17!193;UBERON:0004120!4.38e-17!193;UBERON:0006603!4.38e-17!193;UBERON:0003081!5.05e-12!88;UBERON:0001048!6.30e-12!147;UBERON:0002405!4.01e-09!70;UBERON:0003914!7.51e-09!47;UBERON:0003104!9.93e-09!131;UBERON:0009142!9.93e-09!131;UBERON:0001041!2.61e-08!92;UBERON:0000077!4.93e-08!97;UBERON:0005057!6.89e-08!51;UBERON:0007100!1.07e-07!18;UBERON:0000948!1.07e-07!18;UBERON:0005498!1.07e-07!18;UBERON:0004140!1.07e-07!18;UBERON:0009881!1.07e-07!18;UBERON:0004141!1.07e-07!18;UBERON:0003084!1.07e-07!18;UBERON:0007005!1.07e-07!18;UBERON:0004139!1.07e-07!18;UBERON:0004291!1.07e-07!18;UBERON:0004872!1.67e-07!33;UBERON:0005911!2.05e-07!69;UBERON:0004535!2.29e-07!23;UBERON:0001009!2.29e-07!23;UBERON:0000065!4.85e-07!41;UBERON:0001004!9.34e-07!42|ontology_enrichment_uberon_v019_2=UBERON:0001048,1.43e-12,134;UBERON:0000926,2.67e-12,120;UBERON:0004120,2.67e-12,120;UBERON:0006603,2.67e-12,120;UBERON:0003081,2.97e-12,87;UBERON:0007100,5.47e-09,18;UBERON:0000948,5.47e-09,18;UBERON:0005498,5.47e-09,18;UBERON:0004140,5.47e-09,18;UBERON:0009881,5.47e-09,18;UBERON:0004141,5.47e-09,18;UBERON:0003084,5.47e-09,18;UBERON:0007005,5.47e-09,18;UBERON:0004139,5.47e-09,18;UBERON:0004291,5.47e-09,18;UBERON:0003914,2.61e-08,47;UBERON:0004535,6.37e-08,23;UBERON:0001009,6.37e-08,23;UBERON:0004872,7.38e-08,33;UBERON:0001041,1.20e-07,80;UBERON:0000065,2.81e-07,41;UBERON:0001004,7.37e-07,42|phase1_expression=0.960893082628764,0,0,0.90739263392049,0.500895729946347,0.671517087647559,0.467225281191051,9.68424925811822,2.67498572088167,3.5109678948299,0.68487187290202,0.797721589953364,14.3808613142213,12.6759583507546,1.33243904726265,1.01237633694913,0,5.8360500591274,6.03303507865251,5.09267582157636,0.935476191661768,1.98581902401771,0.783599367416806,1.27993938234725,0.91763712426868,0,1.29228598847722,0.215471232685889,0.380046838912748,0,0.221730510655305,0.635030673459631,0,0,0.866554859253824,0.831173226792462,1.22501613757421,10.4632907684227,7.813353445238,3.66466620781659,12.3528612486513,12.294818729252,4.85510353031154,0.755380907853464,0.709638518536602,0.550640256485045,3.12956537739216,0,0,0.194429899074283,1.1198913730029,0,3.52343472721246,13.0565185562042,14.452033363126,2.57259436035947,4.87106847895886,2.06268836910977,0,0,0,0.677689064138264,0.889294796111139,2.2497492932035,3.9554654502679,0.7104801149461,0.599200221036809,0.384218305321555,0.103689612308478,0.270011876663381,0,0,0.220868540951614,0.122490799214954,0.0958454710182364,0,0,0.638436690425939,0.46081959976873,0.131886287730194,0,0,0,0,0.916789486660861,0.589257170947335,0.142371680799103,0,0.37863096666592,0.226714680320357,5.79728977403356,0.860423876981386,0.679971333707751,1.61910957491345,6.49776417447669,4.03224198387602,1.12355536105401,0.511290967734173,0,0.70667914902068,0.563373679106722,1.28326477414318,0,7.11066703153331,1.08245520505607,0.253359865475099,1.01104889002957,1.7127581957859,9.58070169494535,0.593768556259299,0,0.304465478312141,0.691846491768175,0.452167921657868,1.88141931417128,1.25666591329675,1.48316980640624,4.04878199375753,2.65383165584962,2.10296904931632,1.76673214768315,1.93950101254089,0,0,0,0.766371165625774,1.43778149407104,0,1.14363204365758,0.149790639404823,0.457500602818626,0,1.04294592115366,1.02286182932132,0,0.324482526135515,0.407357455401265,2.11491850037158,1.0108910337347,2.31486041475121,0.520481771850815,0,0.360124259610698,0.30140963567143,0.408218994907967,0.384341160854549,0.374806898238915,0.776110112217047,0.431135985865684,0.567318240503458,0,0.876782929710299,1.11218899690239,0,1.23469281844766,0,0.702213187313235,0.51469581422943,0.568326998791185,3.72826390563903,1.40715635988658,1.62055855314913,1.42046841351126,3.73852040320067,2.46827380619805,1.39520366850245,3.48755421819505,2.80236821681207,2.96207729844265,3.94001913789829,2.91847714365081,3.50879969820798,4.17145219052996,4.69722465661301,0.630869845692382,0.411618449517138,0.330418782983798,0.264450566663544,0.426576501070468,0.232236671860439,0.515469845288373,1.21010114774006,0.444756087689741,0.380451252225118,1.42358718463353,0.494096864172033,0.754005626400808,0.795825888164603,0.779856348476481,0.898819408654221,0.216138049874694,0.597423819763102,0.189667900953082,0,1.1270773567308,0.610953983535943,0.193952487167626,1.1221731182451,0.948548056863859,0.738050739898011,0.784993639206874,0.863780147452604,2.96452627087149,0,0.982794975566015,0.674586337154561,1.21716072833102,0.964708639009667,2.03700681425136,2.5892652370573,2.43202840162553,1.37280706594041,1.43768206527355,1.48856379067401,1.87222603868736,3.03094653536534,2.33216637578486,0.964887042726734,4.2493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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=237860
|HGNC=
|MCL_coexpression_id=1503
|TSSclassifier=NA
|UniProt=Q5SW75
|association_with_transcript=-10bp_to_uc007kgn.1,uc007kgo.1_5end
|cluster_id=chr11:77161761..77161771,+
|description=CAGE_peak_3_at_Ssh2_5end
|id=chr11:77161761..77161771,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0001048,1.43e-12,134;UBERON:0000926,2.67e-12,120;UBERON:0004120,2.67e-12,120;UBERON:0006603,2.67e-12,120;UBERON:0003081,2.97e-12,87;UBERON:0007100,5.47e-09,18;UBERON:0000948,5.47e-09,18;UBERON:0005498,5.47e-09,18;UBERON:0004140,5.47e-09,18;UBERON:0009881,5.47e-09,18;UBERON:0004141,5.47e-09,18;UBERON:0003084,5.47e-09,18;UBERON:0007005,5.47e-09,18;UBERON:0004139,5.47e-09,18;UBERON:0004291,5.47e-09,18;UBERON:0003914,2.61e-08,47;UBERON:0004535,6.37e-08,23;UBERON:0001009,6.37e-08,23;UBERON:0004872,7.38e-08,33;UBERON:0001041,1.20e-07,80;UBERON:0000065,2.81e-07,41;UBERON:0001004,7.37e-07,42
|phase1_expression=0.960893082628764,0,0,0.90739263392049,0.500895729946347,0.671517087647559,0.467225281191051,9.68424925811822,2.67498572088167,3.5109678948299,0.68487187290202,0.797721589953364,14.3808613142213,12.6759583507546,1.33243904726265,1.01237633694913,0,5.8360500591274,6.03303507865251,5.09267582157636,0.935476191661768,1.98581902401771,0.783599367416806,1.27993938234725,0.91763712426868,0,1.29228598847722,0.215471232685889,0.380046838912748,0,0.221730510655305,0.635030673459631,0,0,0.866554859253824,0.831173226792462,1.22501613757421,10.4632907684227,7.813353445238,3.66466620781659,12.3528612486513,12.294818729252,4.85510353031154,0.755380907853464,0.709638518536602,0.550640256485045,3.12956537739216,0,0,0.194429899074283,1.1198913730029,0,3.52343472721246,13.0565185562042,14.452033363126,2.57259436035947,4.87106847895886,2.06268836910977,0,0,0,0.677689064138264,0.889294796111139,2.2497492932035,3.9554654502679,0.7104801149461,0.599200221036809,0.384218305321555,0.103689612308478,0.270011876663381,0,0,0.220868540951614,0.122490799214954,0.0958454710182364,0,0,0.638436690425939,0.46081959976873,0.131886287730194,0,0,0,0,0.916789486660861,0.589257170947335,0.142371680799103,0,0.37863096666592,0.226714680320357,5.79728977403356,0.860423876981386,0.679971333707751,1.61910957491345,6.49776417447669,4.03224198387602,1.12355536105401,0.511290967734173,0,0.70667914902068,0.563373679106722,1.28326477414318,0,7.11066703153331,1.08245520505607,0.253359865475099,1.01104889002957,1.7127581957859,9.58070169494535,0.593768556259299,0,0.304465478312141,0.691846491768175,0.452167921657868,1.88141931417128,1.25666591329675,1.48316980640624,4.04878199375753,2.65383165584962,2.10296904931632,1.76673214768315,1.93950101254089,0,0,0,0.766371165625774,1.43778149407104,0,1.14363204365758,0.149790639404823,0.457500602818626,0,1.04294592115366,1.02286182932132,0,0.324482526135515,0.407357455401265,2.11491850037158,1.0108910337347,2.31486041475121,0.520481771850815,0,0.360124259610698,0.30140963567143,0.408218994907967,0.384341160854549,0.374806898238915,0.776110112217047,0.431135985865684,0.567318240503458,0,0.876782929710299,1.11218899690239,0,1.23469281844766,0,0.702213187313235,0.51469581422943,0.568326998791185,3.72826390563903,1.40715635988658,1.62055855314913,1.42046841351126,3.73852040320067,2.46827380619805,1.39520366850245,3.48755421819505,2.80236821681207,2.96207729844265,3.94001913789829,2.91847714365081,3.50879969820798,4.17145219052996,4.69722465661301,0.630869845692382,0.411618449517138,0.330418782983798,0.264450566663544,0.426576501070468,0.232236671860439,0.515469845288373,1.21010114774006,0.444756087689741,0.380451252225118,1.42358718463353,0.494096864172033,0.754005626400808,0.795825888164603,0.779856348476481,0.898819408654221,0.216138049874694,0.597423819763102,0.189667900953082,0,1.1270773567308,0.610953983535943,0.193952487167626,1.1221731182451,0.948548056863859,0.738050739898011,0.784993639206874,0.863780147452604,2.96452627087149,0,0.982794975566015,0.674586337154561,1.21716072833102,0.964708639009667,2.03700681425136,2.5892652370573,2.43202840162553,1.37280706594041,1.43768206527355,1.48856379067401,1.87222603868736,3.03094653536534,2.33216637578486,0.964887042726734,4.24932337383191,0.757965647081939,0.651859905768103,0.678980343100753,1.87752198630802,1.84256883185997,4.04674189506223,3.70753930929818,3.78324345854858,2.6575762757853,2.07291199254733,3.93271955317771,3.9717545829156,4.33947175744535,6.03165135757089,2.71952841909355,0.983528546038072,0.275936746304732,0.481651769963376,0.820481806145422,0,4.29200576247434,0,0,0.215423397732799,0.477937595905104,0,0.283076530788832,0,0.292255857911312,0,1.28528526568723,1.84522110770749,0.712262414669021,0.488660878060728,1.81467135269789,7.96470830039777,0.485561272309963,0.302323556964751,0.377210159511796,0.295301892880773,0.922305443831782,1.80899805217755,0.727067458955011,1.78248689192361,1.58018378967908,1.05418608574999,0,0.340439605753788,0.36012218806262,0.258717367565509,0.214337035031592,0.354680467284547,0.356737635204141,0.822745103010605,0.913394847343798,0.704015124191131,0.63549621259146,0.441056796109924,1.6488625294148,2.09903754704677,0.663442174209714,0.716234064018819,0.820704498725306,0.291480836629851,0.741701208042039,2.05045056957423,1.23832120777933,1.48155621895769,1.50694765603753,2.1871076435364,2.51655990527175,0.509935289981566,1.39951452323658,2.07299960706636,0.954670618015114,0.474503990371703,0.406638934253697,0.324016022465404,0.836353184057875,1.09181281873089,0.809186078308924,1.57041565878138,0.785267825952089,0.777689839750757,0.621339313086926,0,0.897099276263873,0.330916980914195,1.75006069509643,1.03327858782185,1.68956125490778,1.29092962510329,2.21347454234715,4.08951443260272,1.44950472495604,0.864090018773596,3.16011120628178,0.810900861160657,0.513554785824136,1.42912905275575,0.537080087002444,1.19208812868759,2.52410443991935,1.77227432609493,2.62512769865184,2.057583779685,2.11734988787365,2.24153125701431,1.6356013078856,3.50630706544707,2.0405734525369,0.443971906748129,0,0.167884616364078,1.54551675225752,1.87682475451182,2.56412273974171,1.50057865355346,2.50786052017682,0,0.920650473014354,0.572895513439397,1.03111909406213,0,0,0,0,0.453142408984205,0,0.207574695168353,0.798049746802062,0.682934423016537,0.243106717068294,0.628839487883947,0.919217542250071,0.888986911206461,1.23621034343337,1.92551525755089,2.27427490587418,2.28131369901216,1.88626341386076,0.936415074698824,0.960377286073039,0.976402972245426,1.90517476513229,1.15884325944855,0.964546102318525,1.64834360321323,1.61918812147837,2.05721551431249,0.354951612318675,1.1921809497366,1.0174249164263,1.50575008664529,1.09998990259179,1.09756783723664,1.8414879800649,1.22223702461276,1.12228454331548,0.949080144993393,1.0835493061312,1.22769312950907,0.929621047115796,0.771626443924566,0.749431733813838,0.467863216890817,2.57845264857958,2.29545998482612,0.882365676478062,2.31867835620421
|short_description=p3@Ssh2
}}

Latest revision as of 17:14, 25 September 2015

Short description:p3@Ssh2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Ssh2_5end
Coexpression cluster:MCL_coexpression_mm9:1503
Association with transcript: -10bp_to_uc007kgn.1, uc007kgo.1_5end
EntrezGene:Ssh2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Ssh2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E99.68
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.67
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.68
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.80
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E414.38
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E812.68
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A25.84
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A46.03
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A65.09
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.99
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G810.46
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H17.81
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33.66
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G912.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H212.29
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H44.86
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.71
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.12
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A23.52
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I913.06
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A114.45
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.57
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E14.87
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.92
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.80
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F46.50
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.03
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.71
accessory axillary lymph node, adult.CNhs10475.1063-29H99.58
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C11.88
adrenal gland, neonate N25.CNhs11223.1377-27I31.26
amnion, adult pregnant day17.5.CNhs10488.583-22A81.48
aorta, adult.CNhs10498.46-23H14.05
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F52.10
bone (os femoris), neonate N16.CNhs11225.1525-43A61.77
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.44
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.14
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D51.04
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.11
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G42.31
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.41
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E93.73
heart, embryo E12.CNhs11015.353-12F51.41
heart, embryo E13.CNhs11013.376-3I91.62
heart, embryo E14.CNhs10597.403-26D41.42
heart, embryo E15.CNhs11017.431-16C83.74
heart, embryo E16.CNhs11021.457-17C62.47
heart, embryo E17.CNhs11025.479-18E51.40
heart, embryo E18.CNhs11030.1283-20G33.49
heart, neonate N00.CNhs11213.639-21E32.80
heart, neonate N03.CNhs11221.1349-25I22.96
heart, neonate N10.CNhs11118.749-24G13.94
heart, neonate N16.CNhs11209.782-15G12.92
heart, neonate N20.CNhs11127.821-26I63.51
heart, neonate N25.CNhs11196.1351-25D34.17
heart, neonate N30.CNhs11202.1390-42D24.70
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H41.21
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G71.12
kidney, neonate N10.CNhs11206.758-6D50.95
kidney, neonate N20.CNhs11113.832-19I10.74
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H10.86
liver, adult pregnant day01.CNhs10466.508-5B22.96
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D71.22
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A32.04
liver, embryo E18.CNhs10579.499-43G42.59
liver, neonate N00.CNhs11117.641-24F42.43
liver, neonate N03.CNhs11123.1345-25G21.37
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B91.87
liver, neonate N20.CNhs11220.823-25A33.03
liver, neonate N25.CNhs11198.1368-26H12.33
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B14.25
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B61.88
lung, embryo E17.CNhs10605.480-44A61.84
lung, embryo E18.CNhs10583.1287-20I64.05
lung, neonate N00.CNhs11224.640-42C63.71
lung, neonate N06.CNhs11212.683-20E53.78
lung, neonate N07.CNhs11111.715-19A32.66
lung, neonate N10.CNhs11219.750-23E62.07
lung, neonate N20.CNhs11109.822-18A43.93
lung, neonate N25.CNhs11119.1359-25C73.97
lung, neonate N30.CNhs11133.1394-42H24.34
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A16.03
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.72
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.82
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C24.29
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I71.85
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G61.81
pancreas, adult.CNhs10486.34-16E47.96
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G91.81
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C31.65
skin, neonate N00.CNhs11124.650-25G42.10
skin, neonate N03.CNhs11215.662-22H30.66
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.74
spleen, adult.CNhs10465.25-2G22.05
spleen, embryo E16.CNhs11035.461-43C11.24
spleen, embryo E18.CNhs11011.1271-21F21.48
spleen, neonate N10.CNhs11116.752-24D11.51
spleen, neonate N20.CNhs11112.824-19H12.19
spleen, neonate N25.CNhs11099.1354-25G32.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.40
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.07
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A91.57
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G51.75
testis, embryo E17.CNhs11029.486-18I51.03
testis, embryo E18.CNhs11027.503-18G51.69
testis, neonate N00.CNhs11189.1300-22B71.29
testis, neonate N07.CNhs11222.726-26I42.21
testis, neonate N10.CNhs11204.763-44D94.09
testis, neonate N20.CNhs11110.839-18H31.45
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B53.16
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C51.43
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G41.19
thymus, neonate N02.CNhs11181.1541-43F82.52
thymus, neonate N03.CNhs11137.2104-43C71.77
thymus, neonate N06.CNhs11197.681-26C42.63
thymus, neonate N07.CNhs11211.713-19D32.06
thymus, neonate N10.CNhs11194.748-24E42.12
thymus, neonate N20.CNhs11186.820-7A22.24
thymus, neonate N25.CNhs11125.1362-25G71.64
thymus, neonate N30.CNhs11132.1393-42G23.51
tongue, adult.CNhs10499.32-1B42.04
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E41.55
uterus, adult pregnant day19.CNhs10497.590-15F51.88
uterus, adult.CNhs10509.92-27E52.56
vagina, adult.CNhs10502.89-27D51.50
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.03
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.98
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.08
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C22.58
whole body, neonate N01.CNhs10576.659-23C62.30
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B42.32





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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