FFCP PHASE1:Hg19::chr3:129325612..129325625,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23129 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9107 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y4D7 | |||
|association_with_transcript=-30bp_to_NM_015103,uc003emx.2_5end | |||
|cluster_id=chr3:129325612..129325625,- | |||
|coexpression_cluster_id=C4280 | |||
|description=CAGE_peak_2_at_PLXND1_5end | |||
|id=chr3:129325612..129325625,- | |||
|ontology_enrichment_celltype=CL:0000115!1.54e-17!35;CL:0002078!2.04e-13!44;CL:0002139!2.23e-12!24;CL:0000213!2.30e-09!57;CL:0000215!2.30e-09!57;CL:0000071!2.89e-09!18;CL:0002546!2.89e-09!18 | |||
|ontology_enrichment_celltype_v019=CL:0000115;3.44e-18;36!CL:0002139;1.43e-14;24!CL:0000071;9.78e-11;18!CL:0002078;1.17e-10;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,7.52e-21,36;CL:0002078,9.10e-16,45;CL:0002139,1.63e-14,24;CL:0000071,9.72e-11,18;CL:0002546,9.72e-11,18;CL:0000213,4.03e-10,58;CL:0000215,4.03e-10,58 | |||
|ontology_enrichment_development_v019=CL:0002546;9.78e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!3.55e-10!659;UBERON:0001986!2.89e-09!18;UBERON:0004638!2.89e-09!18;UBERON:0004852!2.89e-09!18;UBERON:0000487!1.61e-08!22;UBERON:0002049!3.24e-08!79;UBERON:0007798!3.24e-08!79;UBERON:0003914!3.25e-08!118;UBERON:0000467!4.18e-08!625;UBERON:0000025!5.66e-08!194;UBERON:0000480!6.92e-08!626;UBERON:0000477!1.13e-07!286;UBERON:0006914!1.29e-07!25;UBERON:0001009!1.93e-07!113;UBERON:0004111!7.27e-07!241;UBERON:0004535!7.46e-07!110;UBERON:0002417!8.26e-07!61;UBERON:0000916!8.26e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;9.78e-11;18!UBERON:0001986;9.78e-11;18!UBERON:0004852;9.78e-11;18!UBERON:0000487;6.16e-09;22!UBERON:0006914;1.30e-07;25!UBERON:0001443;4.13e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,9.72e-11,18;UBERON:0001986,9.72e-11,18;UBERON:0004852,9.72e-11,18;UBERON:0000487,4.18e-09,22;UBERON:0002049,2.73e-08,78;UBERON:0007798,2.73e-08,78;UBERON:0006914,8.04e-08,25;UBERON:0001443,2.09e-07,11;UBERON:0001009,2.92e-07,112;UBERON:0000025,3.05e-07,192;UBERON:0003914,4.31e-07,117;UBERON:0004111,6.46e-07,240;UBERON:0000055,7.57e-07,68;UBERON:0000310,8.01e-07,10 | |||
|phase1_expression=10.5373459976923,14.7729361484778,7.3296290129905,5.00366491765652,8.93922188854576,2.61701557230111,0,2.52687949370732,24.0290777943851,0.491467873003018,0.697801167972428,2.40285509343189,2.11013582582763,0.495065411840187,0.331397375727916,0,0,0,0.487932798790507,0.861847406537515,0.816002764977012,1.88072832886853,2.86235987131057,6.02247470320691,14.6884888325919,0,0,0,0,0.383829398097213,2.32224184974114,0,0,0,0.0774672005803016,0,0.587200878669695,1.66198622559563,2.80762226458198,3.03815219002193,14.1066748771152,10.6884909786263,19.318167572564,0.726991193897824,0.755751887377619,1.21292030593908,0.929716147622738,1.23350366406548,0,1.1507695692886,0,0.709446689665756,1.03423704220986,1.93645405075148,1.35426486594342,0.941211697713023,0.272906150057846,0.224723484445085,0.612167784741805,0.641858054152187,1.91801137739712,0.329851300186716,0.398927315243264,1.70489900213078,0.580418477257168,0,0.622822248995575,1.50749199154046,2.08593167368081,0.434377689410233,0,0,0,0.422510572623884,0.212604299965044,0.419317291016752,1.01095768031846,0.300353785683013,0.16072558669708,0.285012743741249,0.79566670879636,0.365328307529268,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.150575119077773,0,0,0,0,0.604820229674197,0.802320587350522,1.30341963494519,7.31420598941885,1.34140171940727,1.15076305659177,0.722878304769133,1.00267582127178,1.73815822752988,1.5905718941022,0.973269740605272,0.378139268656271,1.55210578223795,0.87834785693126,1.0478326039817,0,0,2.27183175558278,2.26368658489047,3.85578085504709,0.238490624305342,0,0,3.18019851786728,11.1830497363796,9.02565304179745,3.95715559346807,13.8434813949269,8.25354125820202,6.68783892917794,8.26933629341852,15.6537155582153,7.69857409358742,2.41697590265488,1.52054421143703,8.7862340717341,0.367663080345869,14.5825550618717,3.39338967479503,6.06229306090659,10.472867684949,10.7321646226118,6.6448596169769,14.839341258363,0,3.87780264148325,0,14.9091585508596,0.886413581652058,0.397227542439656,1.14734648299525,2.12801029319014,1.12135520028461,1.06748995729705,4.19334832309172,4.04574346019696,2.2900814251847,3.26923806226917,2.4217188423189,3.45705554687999,1.87457145467037,0.936480230490962,0,0.896692083310806,0.117434498643765,0.485618833104395,0.140450806702248,1.02077085627447,0.982674538494144,7.85275936935817,2.37600571456411,1.7308685049499,1.82032272387605,2.87447256726495,0.505008341862199,3.37820003654303,1.10825646193673,0.877955241761676,1.22595118319608,1.65261864797256,1.70148274740032,0.538168907066586,1.2813443329114,0.635795703478686,0.600182192168805,0.412210116953756,0.257640540045629,2.97786970130544,1.85653965465393,0.779496041289589,0.252433774244115,0.736399189138395,0.161646056818812,1.06502877754984,0.403008392910561,0.339121184620975,0,0,0,0.731842236777572,0.265059536642971,0.348581828608555,1.14027160516907,0.504641701751257,0,3.12899064659632,8.36213219650751,1.38134921352481,3.71494342425583,1.44375896333917,0.946454400318751,0.168584690078102,0.482022059766964,0.110293972732394,0.435758888184812,0.71181185733329,0.134831308160164,0,0.38474715694639,9.59602091012043,5.60967095213783,1.2347220339942,7.3504355692771,0,0,3.54473944008842,0,0,0.514703430895577,0,0,0,0,1.62904152655162,2.07986957055916,1.44331342025273,1.507095264676,1.6437217193015,5.34155856715973,4.1668696131895,3.42457474022277,3.1608175918371,1.71697232418975,12.0646332982825,5.38209809820247,30.618019431478,0,0.16798212819886,0,0,0,0.383382679165211,0,1.05658120815871,1.03664057770386,0.576479813667846,0.75745460055828,0.190493682876507,0.381988425558278,1.17217447210047,1.71072446022705,0.822619941626588,0.300343057843917,1.71495859578347,1.00917975910825,3.48768055066624,0.95339771567235,1.03417372606222,21.4593867511129,0,1.86156681609409,4.16029747645464,1.02882949704857,0,1.5985330740966,1.14382394926518,4.34097284313154,1.64648067356154,0.977208552881205,2.13235169245527,0,0.301439377059586,0,0.499864955910285,4.86495122564762,13.5609414686674,8.43335757932127,0.479249710983165,0,1.42636905040718,0.289562613335158,1.02738161275192,2.32779252211864,0.112085143993527,0.394061520403854,0.862510299438069,2.18183161675572,0.254094624222463,0,0,1.00509759200609,0.637938751653163,0,0,0,2.20844685094452,13.5046040686113,0.542530047399471,2.9115920614313,1.24900292158013,3.78485796081443,2.34282829985426,0.902838299183157,4.5481500811197,3.10419213877515,0,1.10621501125022,0.60818530127658,10.1816601880625,5.83343820478455,0.82707210449155,1.2942852049117,2.34800627167578,0,1.66435439510497,1.5119514666484,6.69891081110698,9.821566290436,17.9622460437167,5.63812256725084,6.65219423786715,17.3722234835096,10.3892646511494,0.925258162815933,0.710246901252508,0.574890092096664,1.55776328755086,0.232420756919918,0.120859449591622,0,0,0,0.546273504020151,1.44236856455367,0,0.770153371044148,3.13739907670742,4.38417673959782,0.633309773357254,15.9226737699255,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| |||
|short_description=p2@PLXND1 | |||
}} |
Latest revision as of 17:55, 24 September 2015
Short description: | p2@PLXND1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PLXND1_5end |
Coexpression cluster: | C4280_Renal_Mesenchymal_Hepatic_Endothelial_Macrophage_CD14_Monocytederived |
Association with transcript: | -30bp_to_NM_015103, uc003emx.2_5end |
EntrezGene: | PLXND1 |
HGNC: | 9107 |
UniProt: | Q9Y4D7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 7.52e-21 | 36 |
meso-epithelial cell | 9.10e-16 | 45 |
endothelial cell of vascular tree | 1.63e-14 | 24 |
blood vessel endothelial cell | 9.72e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 9.72e-11 | 18 |
lining cell | 4.03e-10 | 58 |
barrier cell | 4.03e-10 | 58 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 9.72e-11 | 18 |
endothelium | 9.72e-11 | 18 |
cardiovascular system endothelium | 9.72e-11 | 18 |
simple squamous epithelium | 4.18e-09 | 22 |
vasculature | 2.73e-08 | 78 |
vascular system | 2.73e-08 | 78 |
squamous epithelium | 8.04e-08 | 25 |
chest | 2.09e-07 | 11 |
circulatory system | 2.92e-07 | 112 |
tube | 3.05e-07 | 192 |
epithelial tube | 4.31e-07 | 117 |
anatomical conduit | 6.46e-07 | 240 |
vessel | 7.57e-07 | 68 |
breast | 8.01e-07 | 10 |