FFCP PHASE1:Mm9::chr12:112910294..112910300,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=310|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:112910294..112910300,-|id=chr12:112910294..112910300,-|ontology_enrichment_celltype=CL:0002453!9.47e-16!8;CL:0000333!8.86e-15!10;CL:0000095!8.86e-15!10;CL:0000243!8.86e-15!10;CL:0000123!8.86e-15!10;CL:0000125!8.86e-15!10;CL:0000030!8.86e-15!10;CL:0000339!8.86e-15!10;CL:0000128!3.07e-12!6;CL:0000126!3.07e-12!6;CL:0000127!3.07e-12!6;CL:0002319!2.71e-08!43;CL:0000221!5.24e-08!44;CL:0000133!5.24e-08!44|ontology_enrichment_celltype_v019_2=CL:0002453,8.59e-54,8;CL:0000333,4.82e-43,10;CL:0000095,4.82e-43,10;CL:0000243,4.82e-43,10;CL:0000123,4.82e-43,10;CL:0000125,4.82e-43,10;CL:0000030,4.82e-43,10;CL:0000339,4.82e-43,10;CL:0000128,2.95e-37,6;CL:0000126,2.95e-37,6;CL:0000127,2.95e-37,6;CL:0002605,8.62e-19,2;CL:0002604,8.62e-19,2;CL:0000878,2.38e-18,2;CL:0000129,2.38e-18,2;CL:0000219,3.90e-10,54;CL:0002319,7.20e-10,43;CL:0002194,1.15e-09,4;CL:0000766,1.15e-09,4;CL:0000234,1.15e-09,4;CL:0000576,1.15e-09,4;CL:0000235,1.15e-09,4;CL:0000864,1.15e-09,4;CL:0002009,1.15e-09,4;CL:0000040,1.15e-09,4;CL:0000559,1.15e-09,4;CL:0000221,1.23e-09,44;CL:0000133,1.23e-09,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003076!2.35e-14!12;UBERON:0003057!2.35e-14!12;UBERON:0000073!4.19e-12!75;UBERON:0001016!4.19e-12!75;UBERON:0001017!1.16e-11!73;UBERON:0005743!1.16e-11!73;UBERON:0004733!1.76e-11!6;UBERON:0004732!1.76e-11!6;UBERON:0002028!1.76e-11!6;UBERON:0007277!1.76e-11!6;UBERON:0004121!5.90e-10!102;UBERON:0000924!5.90e-10!102;UBERON:0006601!5.90e-10!102;UBERON:0001049!6.27e-09!52;UBERON:0005068!6.27e-09!52;UBERON:0006241!6.27e-09!52;UBERON:0007135!6.27e-09!52;UBERON:0000955!2.54e-08!50;UBERON:0006238!2.54e-08!50;UBERON:0002037!4.51e-08!4;UBERON:0002680!4.51e-08!4;UBERON:0001895!4.51e-08!4;UBERON:0010092!4.51e-08!4;UBERON:0006215!4.51e-08!4;UBERON:0000033!5.56e-08!63;UBERON:0002616!1.77e-07!49;UBERON:0002346!2.35e-07!71;UBERON:0003075!2.35e-07!71;UBERON:0007284!2.35e-07!71;UBERON:0002298!3.55e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0001896,6.48e-18,2;UBERON:0002298,6.48e-18,2;UBERON:0005290,6.48e-18,2;UBERON:0010096,6.48e-18,2;UBERON:0004733,1.11e-13,6;UBERON:0004732,1.11e-13,6;UBERON:0002028,1.11e-13,6;UBERON:0007277,1.11e-13,6;UBERON:0001017,2.66e-09,73;UBERON:0001016,4.87e-09,75;UBERON:0003076,3.87e-07,12;UBERON:0003057,3.87e-07,12;UBERON:0004121,5.21e-07,95;UBERON:0000924,5.21e-07,95;UBERON:0006601,5.21e-07,95|phase1_expression=0,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,4.57852828398938,2.41654801007919,3.88859798148567,1.67983705950435,5.75010257459886,0,0,0,0,0,0,0,0,0,0.677689064138264,1.77858959222228,0,0,0,3.59520132622086,1.15265491596466,0,0,0,0.856952953211411,0.441737081903227,0,0.0958454710182364,0,0,0.383062014255563,0.614426133024974,0,0,0,0.558365998002762,0,0.15279824777681,0,0.284743361598206,0,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.628340120440365,0,0,0,0,0.149790639404823,0.457500602818626,0,0.173824320192276,0,0.20778804455956,0,0,0,0,0,0,0,0.180062129805349,0.150704817835715,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,1.12385412991454,1.28932855251423,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0.164140899745061,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0.25347929989024,0.188626341386076,0,0.0640251524048693,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0.263069711437843,0,0,0.118635018124174,0,0,0,0,0,0,0,0.191288332068843,0,0.231867835620421|short_description=p@chr12:112910294..112910300,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=310 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:112910294..112910300,- | |||
|description=CAGE_peak_at_chr12:112910294..112910300,- | |||
|id=chr12:112910294..112910300,- | |||
|ontology_enrichment_celltype=CL:0002453!9.47e-16!8;CL:0000333!8.86e-15!10;CL:0000095!8.86e-15!10;CL:0000243!8.86e-15!10;CL:0000123!8.86e-15!10;CL:0000125!8.86e-15!10;CL:0000030!8.86e-15!10;CL:0000339!8.86e-15!10;CL:0000128!3.07e-12!6;CL:0000126!3.07e-12!6;CL:0000127!3.07e-12!6;CL:0002319!2.71e-08!43;CL:0000221!5.24e-08!44;CL:0000133!5.24e-08!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,8.59e-54,8;CL:0000333,4.82e-43,10;CL:0000095,4.82e-43,10;CL:0000243,4.82e-43,10;CL:0000123,4.82e-43,10;CL:0000125,4.82e-43,10;CL:0000030,4.82e-43,10;CL:0000339,4.82e-43,10;CL:0000128,2.95e-37,6;CL:0000126,2.95e-37,6;CL:0000127,2.95e-37,6;CL:0002605,8.62e-19,2;CL:0002604,8.62e-19,2;CL:0000878,2.38e-18,2;CL:0000129,2.38e-18,2;CL:0000219,3.90e-10,54;CL:0002319,7.20e-10,43;CL:0002194,1.15e-09,4;CL:0000766,1.15e-09,4;CL:0000234,1.15e-09,4;CL:0000576,1.15e-09,4;CL:0000235,1.15e-09,4;CL:0000864,1.15e-09,4;CL:0002009,1.15e-09,4;CL:0000040,1.15e-09,4;CL:0000559,1.15e-09,4;CL:0000221,1.23e-09,44;CL:0000133,1.23e-09,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003076!2.35e-14!12;UBERON:0003057!2.35e-14!12;UBERON:0000073!4.19e-12!75;UBERON:0001016!4.19e-12!75;UBERON:0001017!1.16e-11!73;UBERON:0005743!1.16e-11!73;UBERON:0004733!1.76e-11!6;UBERON:0004732!1.76e-11!6;UBERON:0002028!1.76e-11!6;UBERON:0007277!1.76e-11!6;UBERON:0004121!5.90e-10!102;UBERON:0000924!5.90e-10!102;UBERON:0006601!5.90e-10!102;UBERON:0001049!6.27e-09!52;UBERON:0005068!6.27e-09!52;UBERON:0006241!6.27e-09!52;UBERON:0007135!6.27e-09!52;UBERON:0000955!2.54e-08!50;UBERON:0006238!2.54e-08!50;UBERON:0002037!4.51e-08!4;UBERON:0002680!4.51e-08!4;UBERON:0001895!4.51e-08!4;UBERON:0010092!4.51e-08!4;UBERON:0006215!4.51e-08!4;UBERON:0000033!5.56e-08!63;UBERON:0002616!1.77e-07!49;UBERON:0002346!2.35e-07!71;UBERON:0003075!2.35e-07!71;UBERON:0007284!2.35e-07!71;UBERON:0002298!3.55e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,6.48e-18,2;UBERON:0002298,6.48e-18,2;UBERON:0005290,6.48e-18,2;UBERON:0010096,6.48e-18,2;UBERON:0004733,1.11e-13,6;UBERON:0004732,1.11e-13,6;UBERON:0002028,1.11e-13,6;UBERON:0007277,1.11e-13,6;UBERON:0001017,2.66e-09,73;UBERON:0001016,4.87e-09,75;UBERON:0003076,3.87e-07,12;UBERON:0003057,3.87e-07,12;UBERON:0004121,5.21e-07,95;UBERON:0000924,5.21e-07,95;UBERON:0006601,5.21e-07,95 | |||
|phase1_expression=0,0,0,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,4.57852828398938,2.41654801007919,3.88859798148567,1.67983705950435,5.75010257459886,0,0,0,0,0,0,0,0,0,0.677689064138264,1.77858959222228,0,0,0,3.59520132622086,1.15265491596466,0,0,0,0.856952953211411,0.441737081903227,0,0.0958454710182364,0,0,0.383062014255563,0.614426133024974,0,0,0,0.558365998002762,0,0.15279824777681,0,0.284743361598206,0,0,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.628340120440365,0,0,0,0,0.149790639404823,0.457500602818626,0,0.173824320192276,0,0.20778804455956,0,0,0,0,0,0,0,0.180062129805349,0.150704817835715,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,1.12385412991454,1.28932855251423,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0.164140899745061,0,0.927126510052548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0.25347929989024,0.188626341386076,0,0.0640251524048693,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0.263069711437843,0,0,0.118635018124174,0,0,0,0,0,0,0,0.191288332068843,0,0.231867835620421 | |||
|short_description=p@chr12:112910294..112910300,- | |||
}} |
Latest revision as of 18:34, 4 August 2015
Short description: | p@chr12:112910294..112910300, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:112910294..112910300, - |
Coexpression cluster: | MCL_coexpression_mm9:310 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 8.59e-54 | 8 |
migratory neural crest cell | 4.82e-43 | 10 |
neuron associated cell | 4.82e-43 | 10 |
glial cell (sensu Vertebrata) | 4.82e-43 | 10 |
neuron associated cell (sensu Vertebrata) | 4.82e-43 | 10 |
glial cell | 4.82e-43 | 10 |
glioblast | 4.82e-43 | 10 |
glioblast (sensu Vertebrata) | 4.82e-43 | 10 |
oligodendrocyte | 2.95e-37 | 6 |
macroglial cell | 2.95e-37 | 6 |
astrocyte | 2.95e-37 | 6 |
astrocyte of the cerebral cortex | 8.62e-19 | 2 |
astrocyte of the hippocampus | 8.62e-19 | 2 |
central nervous system macrophage | 2.38e-18 | 2 |
microglial cell | 2.38e-18 | 2 |
motile cell | 3.90e-10 | 54 |
neural cell | 7.20e-10 | 43 |
monopoietic cell | 1.15e-09 | 4 |
myeloid leukocyte | 1.15e-09 | 4 |
phagocyte | 1.15e-09 | 4 |
monocyte | 1.15e-09 | 4 |
macrophage | 1.15e-09 | 4 |
tissue-resident macrophage | 1.15e-09 | 4 |
macrophage dendritic cell progenitor | 1.15e-09 | 4 |
monoblast | 1.15e-09 | 4 |
promonocyte | 1.15e-09 | 4 |
ectodermal cell | 1.23e-09 | 44 |
neurectodermal cell | 1.23e-09 | 44 |
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 6.48e-18 | 2 |
brainstem | 6.48e-18 | 2 |
myelencephalon | 6.48e-18 | 2 |
future myelencephalon | 6.48e-18 | 2 |
segmental subdivision of hindbrain | 1.11e-13 | 6 |
segmental subdivision of nervous system | 1.11e-13 | 6 |
hindbrain | 1.11e-13 | 6 |
presumptive hindbrain | 1.11e-13 | 6 |
central nervous system | 2.66e-09 | 73 |
nervous system | 4.87e-09 | 75 |
posterior neural tube | 3.87e-07 | 12 |
chordal neural plate | 3.87e-07 | 12 |
ectoderm-derived structure | 5.21e-07 | 95 |
ectoderm | 5.21e-07 | 95 |
presumptive ectoderm | 5.21e-07 | 95 |