FFCP PHASE1:Hg19::chr3:192232532..192232549,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:192232532..192232549,- | |||
|coexpression_cluster_id=C150 | |||
|description=CAGE_peak_at_chr3:192232532..192232549,- | |||
|id=chr3:192232532..192232549,- | |||
|ontology_enrichment_celltype=CL:0000242!1.36e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0000123;1.90e-26;2!CL:0000242;1.90e-26;2!CL:0002553;4.53e-14;1!CL:0000167;6.65e-14;1!CL:0000164;6.65e-14;1!CL:0000502;6.65e-14;1!CL:0000172;6.65e-14;1!CL:0000173;6.65e-14;1!CL:0000312;3.54e-11;5!CL:0000240;1.83e-09;6!CL:0000311;1.83e-09;6!CL:0000079;1.83e-09;6!CL:0000237;1.83e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.90e-26,2;CL:0002553,4.53e-14,1;CL:0000167,6.65e-14,1;CL:0000164,6.65e-14,1;CL:0000502,6.65e-14,1;CL:0000172,6.65e-14,1;CL:0000173,6.65e-14,1;CL:0002351,6.65e-14,1;CL:0000312,3.54e-11,5;CL:0000240,1.83e-09,6;CL:0000311,1.83e-09,6;CL:0000079,1.83e-09,6;CL:0000237,1.83e-09,6;CL:0000036,1.83e-09,6;CL:0000357,1.83e-09,6;CL:0000114,1.83e-09,6 | |||
|ontology_enrichment_development_v019=CL:0002351;6.65e-14;1!CL:0000357;1.83e-09;6!CL:0000114;1.83e-09;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4430;6.65e-14;1!DOID:169;2.45e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,6.65e-14,1;DOID:169,2.45e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0002780!8.53e-25!41;UBERON:0001890!8.53e-25!41;UBERON:0006240!8.53e-25!41;UBERON:0001950!8.75e-25!20;UBERON:0003080!4.21e-24!42;UBERON:0001049!7.90e-23!57;UBERON:0005068!7.90e-23!57;UBERON:0006241!7.90e-23!57;UBERON:0007135!7.90e-23!57;UBERON:0001017!1.85e-22!82;UBERON:0002619!2.35e-22!22;UBERON:0002616!7.09e-22!59;UBERON:0000955!1.39e-21!69;UBERON:0006238!1.39e-21!69;UBERON:0005743!4.05e-21!86;UBERON:0001893!4.76e-21!34;UBERON:0000073!2.83e-20!94;UBERON:0001016!2.83e-20!94;UBERON:0001869!7.36e-20!32;UBERON:0000956!2.04e-19!25;UBERON:0000203!2.04e-19!25;UBERON:0002791!6.43e-19!33;UBERON:0002020!2.30e-18!34;UBERON:0003528!2.30e-18!34;UBERON:0003075!6.21e-18!86;UBERON:0007284!6.21e-18!86;UBERON:0003056!3.49e-17!61;UBERON:0002346!7.29e-17!90;UBERON:0007023!1.34e-15!115;UBERON:0000033!8.59e-12!123;UBERON:0004121!3.25e-11!169;UBERON:0000153!5.81e-11!129;UBERON:0007811!5.81e-11!129;UBERON:0001871!8.06e-11!7;UBERON:0000924!8.63e-11!173;UBERON:0006601!8.63e-11!173;UBERON:0000200!2.60e-09!6;UBERON:0003296!8.38e-09!4;UBERON:0010133!8.38e-09!4;UBERON:0000007!2.42e-08!2;UBERON:0000025!4.39e-08!194;UBERON:0002360!4.41e-07!2;UBERON:0000094!4.41e-07!2;UBERON:0007645!4.41e-07!2;UBERON:0002021!9.46e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;3.83e-28;4!UBERON:0010133;3.83e-28;4!UBERON:0000007;1.85e-25;2!UBERON:0001894;2.19e-16;7!UBERON:0001950;1.27e-09;20!UBERON:0002780;2.03e-09;41!UBERON:0001890;2.03e-09;41!UBERON:0002619;8.33e-09;22!UBERON:0001871;5.87e-08;6!UBERON:0000956;8.19e-08;25!UBERON:0000203;8.19e-08;25!UBERON:0002771;1.87e-07;2!UBERON:0001905;1.87e-07;2!UBERON:0002757;1.87e-07;2!UBERON:0010134;1.87e-07;2!UBERON:0005408;1.87e-07;2!UBERON:0001899;1.87e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,4.21e-28,4;UBERON:0010133,4.21e-28,4;UBERON:0000007,1.44e-25,2;UBERON:0001894,2.31e-16,7;UBERON:0006222,2.31e-16,7;UBERON:0002780,1.11e-13,41;UBERON:0001890,1.11e-13,41;UBERON:0003080,1.11e-13,41;UBERON:0006240,1.11e-13,41;UBERON:0003056,7.13e-12,61;UBERON:0010371,1.41e-10,104;UBERON:0000073,1.62e-10,53;UBERON:0002616,1.62e-10,53;UBERON:0000955,2.00e-10,68;UBERON:0006238,2.00e-10,68;UBERON:0001049,6.21e-10,56;UBERON:0005068,6.21e-10,56;UBERON:0006241,6.21e-10,56;UBERON:0007135,6.21e-10,56;UBERON:0001016,7.98e-10,89;UBERON:0001950,1.46e-09,20;UBERON:0002619,9.44e-09,22;UBERON:0001017,1.16e-08,81;UBERON:0003075,1.16e-08,82;UBERON:0007284,1.16e-08,82;UBERON:0002346,3.17e-08,86;UBERON:0001871,5.87e-08,6;UBERON:0000956,9.14e-08,25;UBERON:0000203,9.14e-08,25;UBERON:0002771,1.99e-07,2;UBERON:0001905,2.25e-07,2;UBERON:0002757,2.25e-07,2;UBERON:0010134,2.25e-07,2;UBERON:0005408,2.25e-07,2;UBERON:0001899,2.25e-07,2;UBERON:0004121,3.15e-07,171;UBERON:0000924,3.15e-07,171;UBERON:0006601,3.15e-07,171 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.265059536642971,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.703347082052564,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0.463840490809256,0,0.260427761085233,0,0,0.1137934482855,0,0,11.0317879437269,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,1.22429104652196,0.063186579628488,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01297273529406,0,0,0,0,0,0,0.686379991447858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0.275078873194468,0,0,0,0.850493793212345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0.704815022316672,0,0,0,0,0,0,0,0,0.2506898940227,0,0.327872630709804,0,0,1.09823638411767,0.625954653532499,0,0.221858103073705,0,0,0,0,0,0,22.9484103845372,4.6374729155464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.83683113910955,0,0,0,0,0,0,0,0,0,8.80627823114017,0,0,0.321146125482298,0,0,0.615349092722265,1.00828678488687,0.276629009856872,0.645902582527404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.87798860003913,0,0.620060389503552,0.317079050969534,0,0,0,0,0,0,1.00885116665647,1.21393120847326,1.59363533945908,0,0,0,0.339848664884159,0.0657727735628491,0,0,0,0,0,0,0,0,0,9.4808167039636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87151570769685,0,0.118920090777569,0,0,0.603851374266694,0,0,0,0,2.59244201811789,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0.271965960763659,1.74540276136151,0,0,0,0,0,0,0.126698501011437,0.305966489225945,0,0.18378979906969,0,0.227336094654718,0.535928260312357,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0.244209805832924,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:192232532..192232549,- | |||
}} |
Latest revision as of 19:30, 29 July 2015
Short description: | p@chr3:192232532..192232549, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:192232532..192232549, - |
Coexpression cluster: | C150_merkel_carcinoid_nonsmall_gastrointestinal_argyrophil_pineal_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.90e-26 | 2 |
lung fibroblast | 4.53e-14 | 1 |
peptide hormone secreting cell | 6.65e-14 | 1 |
enteroendocrine cell | 6.65e-14 | 1 |
type D enteroendocrine cell | 6.65e-14 | 1 |
somatostatin secreting cell | 6.65e-14 | 1 |
pancreatic D cell | 6.65e-14 | 1 |
progenitor cell of endocrine pancreas | 6.65e-14 | 1 |
keratinocyte | 3.54e-11 | 5 |
stratified squamous epithelial cell | 1.83e-09 | 6 |
keratin accumulating cell | 1.83e-09 | 6 |
stratified epithelial cell | 1.83e-09 | 6 |
keratinizing barrier epithelial cell | 1.83e-09 | 6 |
epithelial fate stem cell | 1.83e-09 | 6 |
stratified epithelial stem cell | 1.83e-09 | 6 |
surface ectodermal cell | 1.83e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 6.65e-14 | 1 |
neuroendocrine tumor | 2.45e-09 | 6 |