FFCP PHASE1:Mm9::chr13:43711137..43711157,+: Difference between revisions
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{{FFCP|EntrezGene=328234|HGNC=|MCL_coexpression_id=1345|UniProt=Q8C432|association_with_transcript=-8bp_to_NM_183204,uc007qgh.2_5end|description=CAGE_peak_4_at_Rnf182_5end|id=chr13:43711137..43711157,+|ontology_enrichment_celltype=CL:0000117!2.48e-19!23;CL:0000337!2.48e-19!23;CL:0002319!5.02e-19!43;CL:0000221!2.58e-18!44;CL:0000133!2.58e-18!44;CL:0000540!1.51e-15!33;CL:0000047!1.51e-15!33;CL:0000031!1.51e-15!33;CL:0000404!1.51e-15!33;CL:0000055!1.12e-14!50;CL:0000393!9.90e-12!39;CL:0000211!9.90e-12!39;CL:0002321!2.14e-07!70;CL:0000220!2.14e-07!70;CL:0002609!8.23e-07!6|ontology_enrichment_celltype_v019_2=CL:0000117,6.27e-19,23;CL:0000337,6.27e-19,23;CL:0002319,3.70e-17,43;CL:0000221,9.85e-17,44;CL:0000133,9.85e-17,44;CL:0000540,7.15e-13,33;CL:0000047,7.15e-13,33;CL:0000031,7.15e-13,33;CL:0000404,7.15e-13,33;CL:0000393,1.01e-10,39;CL:0000211,1.01e-10,39;CL:0002321,6.36e-10,70;CL:0002609,2.24e-09,6;CL:0002612,2.18e-08,3;CL:0000120,3.32e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.17e-30!73;UBERON:0005743!3.17e-30!73;UBERON:0000073!6.90e-29!75;UBERON:0001016!6.90e-29!75;UBERON:0002020!5.24e-24!34;UBERON:0001049!7.32e-24!52;UBERON:0005068!7.32e-24!52;UBERON:0006241!7.32e-24!52;UBERON:0007135!7.32e-24!52;UBERON:0002616!3.38e-21!49;UBERON:0004121!1.44e-20!102;UBERON:0000924!1.44e-20!102;UBERON:0006601!1.44e-20!102;UBERON:0000955!1.70e-20!50;UBERON:0006238!1.70e-20!50;UBERON:0002791!6.84e-19!29;UBERON:0003528!6.84e-19!29;UBERON:0001893!6.84e-19!29;UBERON:0002346!1.74e-17!71;UBERON:0003075!1.74e-17!71;UBERON:0007284!1.74e-17!71;UBERON:0003080!7.72e-16!40;UBERON:0002780!4.18e-15!39;UBERON:0001890!4.18e-15!39;UBERON:0006240!4.18e-15!39;UBERON:0000033!4.63e-15!63;UBERON:0000956!1.77e-14!21;UBERON:0001869!1.77e-14!21;UBERON:0000203!1.77e-14!21;UBERON:0003056!1.41e-12!49;UBERON:0002619!4.84e-11!17;UBERON:0003076!6.68e-09!12;UBERON:0003057!6.68e-09!12;UBERON:0007811!3.23e-08!86;UBERON:0000153!1.44e-07!94;UBERON:0001954!2.15e-07!7;UBERON:0003022!2.15e-07!7;UBERON:0002421!2.15e-07!7;UBERON:0000349!2.15e-07!7;UBERON:0002600!2.15e-07!7|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.62e-18,34;UBERON:0001017,1.09e-17,73;UBERON:0001016,3.61e-17,75;UBERON:0000073,2.04e-13,54;UBERON:0004121,3.66e-13,95;UBERON:0000924,3.66e-13,95;UBERON:0006601,3.66e-13,95;UBERON:0000956,1.61e-12,21;UBERON:0001869,1.61e-12,21;UBERON:0000203,1.61e-12,21;UBERON:0001049,1.29e-11,52;UBERON:0005068,1.29e-11,52;UBERON:0006241,1.29e-11,52;UBERON:0007135,1.29e-11,52;UBERON:0003528,1.70e-11,29;UBERON:0002791,1.70e-11,29;UBERON:0001893,1.70e-11,29;UBERON:0001948,1.02e-10,5;UBERON:0002315,1.02e-10,5;UBERON:0002346,3.71e-09,64;UBERON:0003075,3.71e-09,64;UBERON:0007284,3.71e-09,64;UBERON:0002240,5.12e-09,6;UBERON:0005174,5.12e-09,6;UBERON:0001137,5.12e-09,6;UBERON:0002257,2.18e-08,3;UBERON:0002780,2.55e-08,39;UBERON:0001890,2.55e-08,39;UBERON:0006240,2.55e-08,39;UBERON:0003080,4.34e-08,40;UBERON:0010371,7.69e-08,73;UBERON:0001954,1.36e-07,7;UBERON:0003022,1.36e-07,7;UBERON:0002421,1.36e-07,7;UBERON:0000349,1.36e-07,7;UBERON:0002600,1.36e-07,7;UBERON:0002616,6.50e-07,46;UBERON:0000955,9.54e-07,47;UBERON:0006238,9.54e-07,47|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0.659058548203415,1.1665793944457,0.279972843250725,1.43752564364972,0,0,0,0,0,0,1.21389876515759,1.5869729378161,0.633831403506179,0,0,0,0,0,0.599200221036809,1.15265491596466,2.28117147078651,2.97013064329719,2.94454945891935,1.71390590642282,0.883474163806454,0.367472397644862,0.479227355091182,0.919218786610021,2.20231761998777,0.893811366596314,0.46081959976873,0.791317726381163,0.731901148819277,0.52091337055676,0.279182999001381,0,0.30559649555362,1.47314292736834,1.70846016958924,0.931997229126503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0.125666591329675,0,0.86759614151947,0,0,0,0,0,0.585561594023094,0.209446706813455,0,0,0,0,0.599162557619291,0.915001205637253,1.25654352112864,0.173824320192276,0.255715457330331,0.62336413367868,0.486723789203273,0.101839363850316,0,0,0,0,0,0,0.150704817835715,0.136072998302656,0,0,0,0,0,0,0.219195732427575,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,5.24813523134351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0.481651769963376,0.820481806145422,0,0,0,0,0.215423397732799,0.238968797952552,0,0.283076530788832,0,0.292255857911312,0,0,0,0.178065603667255,0.488660878060728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0.161464426695906,0.120625849856312,0,0,0,0.18542530201051,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0.406638934253697,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0.13020438484395,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0.572895513439397,0.343706364687375,1.37016503954128,0.755393897389701,0.675022500231806,0.45032120322422,0,0,0,0.399024873401031,0,0,0.209613162627982,0.367687016900028,0.222246727801615,0.206035057238894,0.64183841918363,0,0.25347929989024,0.565879024158229,0.468207537349412,0.192075457214608,0.229741875822453,0,0.347652977834566,0.192909220463705,0.412085900803307,0.147198920134397,0,0.532427418478012,0,0.145346416632329,0.376437521661322,0.25384382367503,0.548783918618318,0.263069711437843,0.543216455383447,0.561142271657738,0.118635018124174,0.29551344712669,0,0.309873682371932,0.964533054905707,0.749431733813838,0.701794825336225,0.429742108096597,0.191288332068843,0,0|short_description=p4@Rnf182}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=328234 | |||
|HGNC= | |||
|MCL_coexpression_id=1345 | |||
|TSSclassifier=NA | |||
|UniProt=Q8C432 | |||
|association_with_transcript=-8bp_to_NM_183204,uc007qgh.2_5end | |||
|cluster_id=chr13:43711137..43711157,+ | |||
|description=CAGE_peak_4_at_Rnf182_5end | |||
|id=chr13:43711137..43711157,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.48e-19!23;CL:0000337!2.48e-19!23;CL:0002319!5.02e-19!43;CL:0000221!2.58e-18!44;CL:0000133!2.58e-18!44;CL:0000540!1.51e-15!33;CL:0000047!1.51e-15!33;CL:0000031!1.51e-15!33;CL:0000404!1.51e-15!33;CL:0000055!1.12e-14!50;CL:0000393!9.90e-12!39;CL:0000211!9.90e-12!39;CL:0002321!2.14e-07!70;CL:0000220!2.14e-07!70;CL:0002609!8.23e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.27e-19,23;CL:0000337,6.27e-19,23;CL:0002319,3.70e-17,43;CL:0000221,9.85e-17,44;CL:0000133,9.85e-17,44;CL:0000540,7.15e-13,33;CL:0000047,7.15e-13,33;CL:0000031,7.15e-13,33;CL:0000404,7.15e-13,33;CL:0000393,1.01e-10,39;CL:0000211,1.01e-10,39;CL:0002321,6.36e-10,70;CL:0002609,2.24e-09,6;CL:0002612,2.18e-08,3;CL:0000120,3.32e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.17e-30!73;UBERON:0005743!3.17e-30!73;UBERON:0000073!6.90e-29!75;UBERON:0001016!6.90e-29!75;UBERON:0002020!5.24e-24!34;UBERON:0001049!7.32e-24!52;UBERON:0005068!7.32e-24!52;UBERON:0006241!7.32e-24!52;UBERON:0007135!7.32e-24!52;UBERON:0002616!3.38e-21!49;UBERON:0004121!1.44e-20!102;UBERON:0000924!1.44e-20!102;UBERON:0006601!1.44e-20!102;UBERON:0000955!1.70e-20!50;UBERON:0006238!1.70e-20!50;UBERON:0002791!6.84e-19!29;UBERON:0003528!6.84e-19!29;UBERON:0001893!6.84e-19!29;UBERON:0002346!1.74e-17!71;UBERON:0003075!1.74e-17!71;UBERON:0007284!1.74e-17!71;UBERON:0003080!7.72e-16!40;UBERON:0002780!4.18e-15!39;UBERON:0001890!4.18e-15!39;UBERON:0006240!4.18e-15!39;UBERON:0000033!4.63e-15!63;UBERON:0000956!1.77e-14!21;UBERON:0001869!1.77e-14!21;UBERON:0000203!1.77e-14!21;UBERON:0003056!1.41e-12!49;UBERON:0002619!4.84e-11!17;UBERON:0003076!6.68e-09!12;UBERON:0003057!6.68e-09!12;UBERON:0007811!3.23e-08!86;UBERON:0000153!1.44e-07!94;UBERON:0001954!2.15e-07!7;UBERON:0003022!2.15e-07!7;UBERON:0002421!2.15e-07!7;UBERON:0000349!2.15e-07!7;UBERON:0002600!2.15e-07!7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.62e-18,34;UBERON:0001017,1.09e-17,73;UBERON:0001016,3.61e-17,75;UBERON:0000073,2.04e-13,54;UBERON:0004121,3.66e-13,95;UBERON:0000924,3.66e-13,95;UBERON:0006601,3.66e-13,95;UBERON:0000956,1.61e-12,21;UBERON:0001869,1.61e-12,21;UBERON:0000203,1.61e-12,21;UBERON:0001049,1.29e-11,52;UBERON:0005068,1.29e-11,52;UBERON:0006241,1.29e-11,52;UBERON:0007135,1.29e-11,52;UBERON:0003528,1.70e-11,29;UBERON:0002791,1.70e-11,29;UBERON:0001893,1.70e-11,29;UBERON:0001948,1.02e-10,5;UBERON:0002315,1.02e-10,5;UBERON:0002346,3.71e-09,64;UBERON:0003075,3.71e-09,64;UBERON:0007284,3.71e-09,64;UBERON:0002240,5.12e-09,6;UBERON:0005174,5.12e-09,6;UBERON:0001137,5.12e-09,6;UBERON:0002257,2.18e-08,3;UBERON:0002780,2.55e-08,39;UBERON:0001890,2.55e-08,39;UBERON:0006240,2.55e-08,39;UBERON:0003080,4.34e-08,40;UBERON:0010371,7.69e-08,73;UBERON:0001954,1.36e-07,7;UBERON:0003022,1.36e-07,7;UBERON:0002421,1.36e-07,7;UBERON:0000349,1.36e-07,7;UBERON:0002600,1.36e-07,7;UBERON:0002616,6.50e-07,46;UBERON:0000955,9.54e-07,47;UBERON:0006238,9.54e-07,47 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0.659058548203415,1.1665793944457,0.279972843250725,1.43752564364972,0,0,0,0,0,0,1.21389876515759,1.5869729378161,0.633831403506179,0,0,0,0,0,0.599200221036809,1.15265491596466,2.28117147078651,2.97013064329719,2.94454945891935,1.71390590642282,0.883474163806454,0.367472397644862,0.479227355091182,0.919218786610021,2.20231761998777,0.893811366596314,0.46081959976873,0.791317726381163,0.731901148819277,0.52091337055676,0.279182999001381,0,0.30559649555362,1.47314292736834,1.70846016958924,0.931997229126503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0.125666591329675,0,0.86759614151947,0,0,0,0,0,0.585561594023094,0.209446706813455,0,0,0,0,0.599162557619291,0.915001205637253,1.25654352112864,0.173824320192276,0.255715457330331,0.62336413367868,0.486723789203273,0.101839363850316,0,0,0,0,0,0,0.150704817835715,0.136072998302656,0,0,0,0,0,0,0.219195732427575,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,5.24813523134351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0.481651769963376,0.820481806145422,0,0,0,0,0.215423397732799,0.238968797952552,0,0.283076530788832,0,0.292255857911312,0,0,0,0.178065603667255,0.488660878060728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0.161464426695906,0.120625849856312,0,0,0,0.18542530201051,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0.406638934253697,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0.13020438484395,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0.572895513439397,0.343706364687375,1.37016503954128,0.755393897389701,0.675022500231806,0.45032120322422,0,0,0,0.399024873401031,0,0,0.209613162627982,0.367687016900028,0.222246727801615,0.206035057238894,0.64183841918363,0,0.25347929989024,0.565879024158229,0.468207537349412,0.192075457214608,0.229741875822453,0,0.347652977834566,0.192909220463705,0.412085900803307,0.147198920134397,0,0.532427418478012,0,0.145346416632329,0.376437521661322,0.25384382367503,0.548783918618318,0.263069711437843,0.543216455383447,0.561142271657738,0.118635018124174,0.29551344712669,0,0.309873682371932,0.964533054905707,0.749431733813838,0.701794825336225,0.429742108096597,0.191288332068843,0,0 | |||
|short_description=p4@Rnf182 | |||
}} |
Latest revision as of 15:26, 1 October 2015
Short description: | p4@Rnf182 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Rnf182_5end |
Coexpression cluster: | MCL_coexpression_mm9:1345 |
Association with transcript: | -8bp_to_NM_183204, uc007qgh.2_5end |
EntrezGene: | Rnf182 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.27e-19 | 23 |
neuroblast (sensu Vertebrata) | 6.27e-19 | 23 |
neural cell | 3.70e-17 | 43 |
ectodermal cell | 9.85e-17 | 44 |
neurectodermal cell | 9.85e-17 | 44 |
neuron | 7.15e-13 | 33 |
neuronal stem cell | 7.15e-13 | 33 |
neuroblast | 7.15e-13 | 33 |
electrically signaling cell | 7.15e-13 | 33 |
electrically responsive cell | 1.01e-10 | 39 |
electrically active cell | 1.01e-10 | 39 |
embryonic cell | 6.36e-10 | 70 |
neuron of cerebral cortex | 2.24e-09 | 6 |
neuron of the ventral spinal cord | 2.18e-08 | 3 |
granule cell | 3.32e-08 | 3 |