FFCP PHASE1:Mm9::chr13:44829403..44829438,+: Difference between revisions
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{{FFCP|EntrezGene=16468|HGNC=|MCL_coexpression_id=2844|UniProt=|association_with_transcript=0bp_to_ENSMUST00000172581_5end|description=CAGE_peak_11_at_Jarid2_5end|id=chr13:44829403..44829438,+|ontology_enrichment_celltype=CL:0000838!3.85e-08!12;CL:0000542!7.24e-08!13;CL:0000051!7.24e-08!13;CL:0000791!8.20e-08!9;CL:0000789!8.20e-08!9;CL:0002420!8.20e-08!9;CL:0002419!8.20e-08!9;CL:0000790!8.20e-08!9;CL:0000084!1.66e-07!11;CL:0000827!1.66e-07!11;CL:0000624!4.37e-07!8|ontology_enrichment_celltype_v019_2=CL:0000791,3.29e-24,9;CL:0000789,3.29e-24,9;CL:0002420,3.29e-24,9;CL:0002419,3.29e-24,9;CL:0000790,3.29e-24,9;CL:0000838,9.77e-22,12;CL:0000624,1.39e-21,8;CL:0000542,6.63e-20,13;CL:0000051,6.63e-20,13;CL:0000084,1.74e-19,11;CL:0000827,1.74e-19,11;CL:0000893,2.06e-16,6;CL:0002489,2.06e-16,6;CL:0000898,2.06e-16,6;CL:0000809,2.06e-16,6;CL:0000810,2.06e-16,6;CL:0000895,2.06e-16,6;CL:0000808,2.06e-16,6;CL:0000894,2.06e-16,6;CL:0000806,2.06e-16,6;CL:0000807,2.06e-16,6;CL:0000805,2.06e-16,6;CL:0002425,2.06e-16,6;CL:0002436,2.06e-16,6;CL:0002427,2.06e-16,6;CL:0002428,2.06e-16,6;CL:0002429,2.06e-16,6;CL:0002433,2.06e-16,6;CL:0002431,2.06e-16,6;CL:0002432,2.06e-16,6;CL:0000738,9.85e-15,17;CL:0002087,9.85e-15,17;CL:0002031,2.30e-09,25;CL:0000988,2.35e-08,32;CL:0002032,2.35e-08,32;CL:0000037,2.35e-08,32;CL:0000837,2.35e-08,32;CL:0002320,2.21e-07,46;CL:0000134,2.21e-07,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000077,9.41e-12,35;UBERON:0002370,1.27e-09,23;UBERON:0000974,1.27e-09,23;UBERON:0004807,1.27e-09,23;UBERON:0005058,1.27e-09,23;UBERON:0003351,1.27e-09,23;UBERON:0009113,1.27e-09,23;UBERON:0003295,1.27e-09,23;UBERON:0009722,1.27e-09,23;UBERON:0005562,1.27e-09,23;UBERON:0007690,1.27e-09,23;UBERON:0006562,3.84e-09,24;UBERON:0003408,3.84e-09,24;UBERON:0001557,3.84e-09,24;UBERON:0001042,3.84e-09,24;UBERON:0008814,3.84e-09,24;UBERON:0009145,3.84e-09,24;UBERON:0000490,1.06e-08,66;UBERON:0003929,1.19e-08,55;UBERON:0005631,1.34e-08,3;UBERON:0000478,1.34e-08,3;UBERON:0000158,1.34e-08,3;UBERON:0000072,6.47e-08,27;UBERON:0002384,2.21e-07,46;UBERON:0004177,3.06e-07,29;UBERON:0005057,3.06e-07,29|phase1_expression=0,1.39590163055744,0.454999239389536,1.51232105653415,2.50447864973174,0.839396359559449,0.934450562382103,8.65126267058561,22.2446180999633,18.0229685267935,1.02730780935303,3.11111420081812,7.01922992717943,6.55653018142481,0,0,0,0.157731082679119,0.137114433605739,0.42438965179803,4.25216450755349,0.297872853602656,0.261199789138935,0,0,0.57423196411502,0,0.430942465371778,0,0.504060259519861,0.221730510655305,0.635030673459631,0,0,0,0,0.408338712524738,0.418531630736908,1.5626706890476,0,0,0.683045484958446,0,0.251793635951155,0.405507724878058,0.734187008646726,0,0,0,0,0,0,2.18117387875057,6.5282592781021,8.06625117941913,0.257259436035947,0,1.03134418455488,0.809265843438391,0,0,0,0.889294796111139,0,0,0,0,0.384218305321555,0.103689612308478,0,0.210324961351382,0,0.662605622854841,0.367472397644862,0,0,0,0,0,0.131886287730194,0.274462930807229,0,0,0,0.15279824777681,0,0.142371680799103,0.186399445825301,0.454357159999104,0.0755715601067855,2.31891590961342,1.72084775396277,0,0,0,0,0.983110940922263,0,0,0,0.281686839553361,2.56652954828636,0,0,0,0,0,0.79928715803342,1.29468941823586,0.148442139064825,0.173485326766136,0,0,0,0,0.251333182659351,5.43828929015623,0.578397427679647,0,0.161766849947409,0.220841518460394,0,0,0,0.209446706813455,0,0.239630249011841,1.79970819298022,0.127070227073065,0.299581278809645,0,0,0,0,0.20778804455956,0.324482526135515,0.101839363850316,0.124406970610093,0,0.210441855886474,0,0,0,0,0.272145996605311,0.12811372028485,0.0937017245597288,1.29351685369508,0,0.378212160335639,0,0,0,0,0,0.398068533636986,0.702213187313235,0,0.284163499395593,0,0.234526059981096,0,0,0.196764231747404,0.154267112887378,0.232533944750408,0.804820204198858,0.116765342367169,0.16455984991348,0.820837320395476,0.405344047729279,0.146199987425332,0.219550115291051,0.134206418760372,0,0.102904612379284,0.330418782983798,0,0.213288250535234,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0.432276099749388,0.199141273254367,0,0.114248512609729,0,0.203651327845314,0,0.420814919341911,0.0632365371242573,0.442830443938806,0,0.370191491765402,0,0,0,0,0,0,0,0.287696137450811,0.648540907100142,0.274561413188081,0,0.372140947668503,0,0.252578877947112,0,0,0.184753190166605,0.189491411770485,0.162964976442026,0,0,0.167506257441816,0,0.195133647857799,0,0,0.159454768657487,0.163863314715738,0.690739927463582,0.433947175744535,0,0,0,0.275936746304732,0,0,0.163934945376675,0,0.315508219416257,0,0.215423397732799,0.238968797952552,0.445597348164788,0.566153061577665,0.404810701674894,0.292255857911312,0.395287777946524,0.321321316421807,0.283880170416537,0.35613120733451,0.325773918707152,0.164970122972535,0,0.242780636154981,0.604647113929502,0,0,0,0.775284879504663,0,0.356497378384721,0,0,0,0,0,0.129358683782755,0,0,0,0.164549020602121,0,1.64270195644597,2.33015277950202,2.20528398054962,1.31909002353184,0.484393280087717,0.241251699712623,0.596861720015682,0.328281799490123,0.291480836629851,0.556275906031529,0.170870880797853,0.206386867963223,0,0.188368457004691,0.136694227721025,0,1.69978429993855,0.69975726161829,0.829199842826543,0,0,0.406638934253697,0.540026704109006,0.418176592028937,0,0.269728692769641,0.495920734352016,0.523511883968059,0,0,9.58277995763124,0.149516546043979,0,0.388902376688095,0,0.168956125490778,0.117357238645754,0.2604087696879,0.419437377702843,1.69108884578204,22.1783104818556,0.948033361884535,0,0,0.129920822977795,0.537080087002444,1.19208812868759,0.120195449519969,0.443068581523732,0.605798699688886,0.381034033274999,0.604957110821043,1.16949456887703,0.0962118416403295,1.16876902181569,0,0.887943813496259,0.538283139656854,2.18250001273302,0.386379188064381,0.187682475451182,0,0,0.501572104035363,0,0,0,0,0,0.755393897389701,0,0,0.906284817968409,0,0,0.399024873401031,0,0,0,0,0,0.206035057238894,0.64183841918363,0,0.25347929989024,0.377252682772152,0.561849044819294,0.256100609619477,0.287177344778066,0,0.231768651889711,0.578727661391115,0,0.735994600671987,0,0.354951612318675,0.715308569841963,0.436039249896986,0.282328141245992,0.25384382367503,0.365855945745545,0.789209134313529,0.271608227691724,0,0,0.197008964751127,0.409231043169689,0.464810523557898,0,0,0,0,0,0.220591419119515,0.463735671240843|short_description=p11@Jarid2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16468 | |||
|HGNC= | |||
|MCL_coexpression_id=2844 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000172581_5end | |||
|cluster_id=chr13:44829403..44829438,+ | |||
|description=CAGE_peak_11_at_Jarid2_5end | |||
|id=chr13:44829403..44829438,+ | |||
|ontology_enrichment_celltype=CL:0000838!3.85e-08!12;CL:0000542!7.24e-08!13;CL:0000051!7.24e-08!13;CL:0000791!8.20e-08!9;CL:0000789!8.20e-08!9;CL:0002420!8.20e-08!9;CL:0002419!8.20e-08!9;CL:0000790!8.20e-08!9;CL:0000084!1.66e-07!11;CL:0000827!1.66e-07!11;CL:0000624!4.37e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.29e-24,9;CL:0000789,3.29e-24,9;CL:0002420,3.29e-24,9;CL:0002419,3.29e-24,9;CL:0000790,3.29e-24,9;CL:0000838,9.77e-22,12;CL:0000624,1.39e-21,8;CL:0000542,6.63e-20,13;CL:0000051,6.63e-20,13;CL:0000084,1.74e-19,11;CL:0000827,1.74e-19,11;CL:0000893,2.06e-16,6;CL:0002489,2.06e-16,6;CL:0000898,2.06e-16,6;CL:0000809,2.06e-16,6;CL:0000810,2.06e-16,6;CL:0000895,2.06e-16,6;CL:0000808,2.06e-16,6;CL:0000894,2.06e-16,6;CL:0000806,2.06e-16,6;CL:0000807,2.06e-16,6;CL:0000805,2.06e-16,6;CL:0002425,2.06e-16,6;CL:0002436,2.06e-16,6;CL:0002427,2.06e-16,6;CL:0002428,2.06e-16,6;CL:0002429,2.06e-16,6;CL:0002433,2.06e-16,6;CL:0002431,2.06e-16,6;CL:0002432,2.06e-16,6;CL:0000738,9.85e-15,17;CL:0002087,9.85e-15,17;CL:0002031,2.30e-09,25;CL:0000988,2.35e-08,32;CL:0002032,2.35e-08,32;CL:0000037,2.35e-08,32;CL:0000837,2.35e-08,32;CL:0002320,2.21e-07,46;CL:0000134,2.21e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000077,9.41e-12,35;UBERON:0002370,1.27e-09,23;UBERON:0000974,1.27e-09,23;UBERON:0004807,1.27e-09,23;UBERON:0005058,1.27e-09,23;UBERON:0003351,1.27e-09,23;UBERON:0009113,1.27e-09,23;UBERON:0003295,1.27e-09,23;UBERON:0009722,1.27e-09,23;UBERON:0005562,1.27e-09,23;UBERON:0007690,1.27e-09,23;UBERON:0006562,3.84e-09,24;UBERON:0003408,3.84e-09,24;UBERON:0001557,3.84e-09,24;UBERON:0001042,3.84e-09,24;UBERON:0008814,3.84e-09,24;UBERON:0009145,3.84e-09,24;UBERON:0000490,1.06e-08,66;UBERON:0003929,1.19e-08,55;UBERON:0005631,1.34e-08,3;UBERON:0000478,1.34e-08,3;UBERON:0000158,1.34e-08,3;UBERON:0000072,6.47e-08,27;UBERON:0002384,2.21e-07,46;UBERON:0004177,3.06e-07,29;UBERON:0005057,3.06e-07,29 | |||
|phase1_expression=0,1.39590163055744,0.454999239389536,1.51232105653415,2.50447864973174,0.839396359559449,0.934450562382103,8.65126267058561,22.2446180999633,18.0229685267935,1.02730780935303,3.11111420081812,7.01922992717943,6.55653018142481,0,0,0,0.157731082679119,0.137114433605739,0.42438965179803,4.25216450755349,0.297872853602656,0.261199789138935,0,0,0.57423196411502,0,0.430942465371778,0,0.504060259519861,0.221730510655305,0.635030673459631,0,0,0,0,0.408338712524738,0.418531630736908,1.5626706890476,0,0,0.683045484958446,0,0.251793635951155,0.405507724878058,0.734187008646726,0,0,0,0,0,0,2.18117387875057,6.5282592781021,8.06625117941913,0.257259436035947,0,1.03134418455488,0.809265843438391,0,0,0,0.889294796111139,0,0,0,0,0.384218305321555,0.103689612308478,0,0.210324961351382,0,0.662605622854841,0.367472397644862,0,0,0,0,0,0.131886287730194,0.274462930807229,0,0,0,0.15279824777681,0,0.142371680799103,0.186399445825301,0.454357159999104,0.0755715601067855,2.31891590961342,1.72084775396277,0,0,0,0,0.983110940922263,0,0,0,0.281686839553361,2.56652954828636,0,0,0,0,0,0.79928715803342,1.29468941823586,0.148442139064825,0.173485326766136,0,0,0,0,0.251333182659351,5.43828929015623,0.578397427679647,0,0.161766849947409,0.220841518460394,0,0,0,0.209446706813455,0,0.239630249011841,1.79970819298022,0.127070227073065,0.299581278809645,0,0,0,0,0.20778804455956,0.324482526135515,0.101839363850316,0.124406970610093,0,0.210441855886474,0,0,0,0,0.272145996605311,0.12811372028485,0.0937017245597288,1.29351685369508,0,0.378212160335639,0,0,0,0,0,0.398068533636986,0.702213187313235,0,0.284163499395593,0,0.234526059981096,0,0,0.196764231747404,0.154267112887378,0.232533944750408,0.804820204198858,0.116765342367169,0.16455984991348,0.820837320395476,0.405344047729279,0.146199987425332,0.219550115291051,0.134206418760372,0,0.102904612379284,0.330418782983798,0,0.213288250535234,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0.432276099749388,0.199141273254367,0,0.114248512609729,0,0.203651327845314,0,0.420814919341911,0.0632365371242573,0.442830443938806,0,0.370191491765402,0,0,0,0,0,0,0,0.287696137450811,0.648540907100142,0.274561413188081,0,0.372140947668503,0,0.252578877947112,0,0,0.184753190166605,0.189491411770485,0.162964976442026,0,0,0.167506257441816,0,0.195133647857799,0,0,0.159454768657487,0.163863314715738,0.690739927463582,0.433947175744535,0,0,0,0.275936746304732,0,0,0.163934945376675,0,0.315508219416257,0,0.215423397732799,0.238968797952552,0.445597348164788,0.566153061577665,0.404810701674894,0.292255857911312,0.395287777946524,0.321321316421807,0.283880170416537,0.35613120733451,0.325773918707152,0.164970122972535,0,0.242780636154981,0.604647113929502,0,0,0,0.775284879504663,0,0.356497378384721,0,0,0,0,0,0.129358683782755,0,0,0,0.164549020602121,0,1.64270195644597,2.33015277950202,2.20528398054962,1.31909002353184,0.484393280087717,0.241251699712623,0.596861720015682,0.328281799490123,0.291480836629851,0.556275906031529,0.170870880797853,0.206386867963223,0,0.188368457004691,0.136694227721025,0,1.69978429993855,0.69975726161829,0.829199842826543,0,0,0.406638934253697,0.540026704109006,0.418176592028937,0,0.269728692769641,0.495920734352016,0.523511883968059,0,0,9.58277995763124,0.149516546043979,0,0.388902376688095,0,0.168956125490778,0.117357238645754,0.2604087696879,0.419437377702843,1.69108884578204,22.1783104818556,0.948033361884535,0,0,0.129920822977795,0.537080087002444,1.19208812868759,0.120195449519969,0.443068581523732,0.605798699688886,0.381034033274999,0.604957110821043,1.16949456887703,0.0962118416403295,1.16876902181569,0,0.887943813496259,0.538283139656854,2.18250001273302,0.386379188064381,0.187682475451182,0,0,0.501572104035363,0,0,0,0,0,0.755393897389701,0,0,0.906284817968409,0,0,0.399024873401031,0,0,0,0,0,0.206035057238894,0.64183841918363,0,0.25347929989024,0.377252682772152,0.561849044819294,0.256100609619477,0.287177344778066,0,0.231768651889711,0.578727661391115,0,0.735994600671987,0,0.354951612318675,0.715308569841963,0.436039249896986,0.282328141245992,0.25384382367503,0.365855945745545,0.789209134313529,0.271608227691724,0,0,0.197008964751127,0.409231043169689,0.464810523557898,0,0,0,0,0,0.220591419119515,0.463735671240843 | |||
|short_description=p11@Jarid2 | |||
}} |
Latest revision as of 15:39, 1 October 2015
Short description: | p11@Jarid2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_Jarid2_5end |
Coexpression cluster: | MCL_coexpression_mm9:2844 |
Association with transcript: | 0bp_to_ENSMUST00000172581_5end |
EntrezGene: | Jarid2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mixed endoderm/mesoderm-derived structure | 9.41e-12 | 35 |
thymus | 1.27e-09 | 23 |
neck | 1.27e-09 | 23 |
respiratory system epithelium | 1.27e-09 | 23 |
hemolymphoid system gland | 1.27e-09 | 23 |
pharyngeal epithelium | 1.27e-09 | 23 |
thymic region | 1.27e-09 | 23 |
pharyngeal gland | 1.27e-09 | 23 |
entire pharyngeal arch endoderm | 1.27e-09 | 23 |
thymus primordium | 1.27e-09 | 23 |
early pharyngeal endoderm | 1.27e-09 | 23 |
pharynx | 3.84e-09 | 24 |
gland of gut | 3.84e-09 | 24 |
upper respiratory tract | 3.84e-09 | 24 |
chordate pharynx | 3.84e-09 | 24 |
pharyngeal arch system | 3.84e-09 | 24 |
pharyngeal region of foregut | 3.84e-09 | 24 |
unilaminar epithelium | 1.06e-08 | 66 |
gut epithelium | 1.19e-08 | 55 |
extraembryonic membrane | 1.34e-08 | 3 |
extraembryonic structure | 1.34e-08 | 3 |
membranous layer | 1.34e-08 | 3 |
segment of respiratory tract | 6.47e-08 | 27 |
connective tissue | 2.21e-07 | 46 |
hemopoietic organ | 3.06e-07 | 29 |
immune organ | 3.06e-07 | 29 |