FFCP PHASE1:Hg19::chr4:126236103..126236150,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:126236103..126236150,+ | |||
|coexpression_cluster_id=C4367 | |||
|description=CAGE_peak_at_chr4:126236103..126236150,+ | |||
|id=chr4:126236103..126236150,+ | |||
|ontology_enrichment_celltype=CL:0002139!5.22e-11!24;CL:0000057!1.41e-09!75;CL:0000055!5.62e-09!180;CL:0000115!1.09e-08!35;CL:0000071!6.29e-08!18;CL:0002546!6.29e-08!18;CL:0002078!8.24e-08!44;CL:0000213!3.50e-07!57;CL:0000215!3.50e-07!57;CL:0000222!3.84e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0002139;7.70e-12;24!CL:0000071;1.75e-08;18!CL:0000115;4.79e-08;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,7.16e-12,24;CL:0000115,2.61e-09,36;CL:0000057,8.25e-09,76;CL:0000071,1.64e-08,18;CL:0002546,1.64e-08,18;CL:0002078,3.12e-08,45 | |||
|ontology_enrichment_development_v019=CL:0002546;1.75e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000477!2.92e-20!286;UBERON:0000468!3.40e-18!659;UBERON:0000475!2.08e-17!365;UBERON:0004111!4.04e-15!241;UBERON:0007023!4.50e-14!115;UBERON:0000924!1.79e-13!173;UBERON:0006601!1.79e-13!173;UBERON:0000119!2.74e-13!312;UBERON:0000483!9.02e-13!309;UBERON:0000481!1.39e-12!347;UBERON:0004121!2.79e-12!169;UBERON:0000033!3.84e-11!123;UBERON:0000025!4.56e-11!194;UBERON:0000467!4.63e-11!625;UBERON:0002346!5.73e-11!90;UBERON:0000153!6.74e-11!129;UBERON:0007811!6.74e-11!129;UBERON:0000480!8.00e-11!626;UBERON:0001017!3.37e-10!82;UBERON:0002049!4.02e-10!79;UBERON:0007798!4.02e-10!79;UBERON:0002616!1.05e-09!59;UBERON:0003075!1.08e-09!86;UBERON:0007284!1.08e-09!86;UBERON:0000073!1.84e-09!94;UBERON:0001016!1.84e-09!94;UBERON:0005743!3.89e-09!86;UBERON:0000955!4.74e-09!69;UBERON:0006238!4.74e-09!69;UBERON:0001049!9.48e-09!57;UBERON:0005068!9.48e-09!57;UBERON:0006241!9.48e-09!57;UBERON:0007135!9.48e-09!57;UBERON:0000922!1.19e-08!612;UBERON:0001009!4.07e-08!113;UBERON:0001986!6.29e-08!18;UBERON:0004638!6.29e-08!18;UBERON:0004852!6.29e-08!18;UBERON:0002050!7.95e-08!605;UBERON:0005423!7.95e-08!605;UBERON:0000923!1.53e-07!604;UBERON:0005291!1.53e-07!604;UBERON:0006598!1.53e-07!604;UBERON:0002532!1.53e-07!604;UBERON:0004535!1.80e-07!110;UBERON:0000064!2.70e-07!219;UBERON:0004872!4.17e-07!84;UBERON:0003080!6.34e-07!42;UBERON:0000055!6.83e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.75e-08;18!UBERON:0001986;1.75e-08;18!UBERON:0004852;1.75e-08;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.72e-15,114;UBERON:0010314,2.39e-12,132;UBERON:0004111,4.56e-12,240;UBERON:0004121,1.45e-11,171;UBERON:0000924,1.45e-11,171;UBERON:0006601,1.45e-11,171;UBERON:0002346,2.01e-10,86;UBERON:0000119,5.23e-10,309;UBERON:0011216,6.70e-10,223;UBERON:0000483,1.54e-09,306;UBERON:0002049,2.77e-09,78;UBERON:0007798,2.77e-09,78;UBERON:0003075,4.33e-09,82;UBERON:0007284,4.33e-09,82;UBERON:0001017,1.23e-08,81;UBERON:0000025,1.35e-08,192;UBERON:0004638,1.64e-08,18;UBERON:0001986,1.64e-08,18;UBERON:0004852,1.64e-08,18;UBERON:0001016,1.68e-08,89;UBERON:0001049,5.37e-08,56;UBERON:0005068,5.37e-08,56;UBERON:0006241,5.37e-08,56;UBERON:0007135,5.37e-08,56;UBERON:0000955,5.89e-08,68;UBERON:0006238,5.89e-08,68;UBERON:0001009,2.40e-07,112;UBERON:0000073,4.89e-07,53;UBERON:0002616,4.89e-07,53;UBERON:0010371,7.76e-07,104;UBERON:0000923,8.60e-07,560;UBERON:0010316,8.60e-07,560;UBERON:0005291,8.60e-07,560;UBERON:0006598,8.60e-07,560;UBERON:0010317,8.60e-07,560;UBERON:0002532,8.60e-07,560 | |||
|phase1_expression=25.2532947186074,12.631930909568,15.3640300464609,8.00586386825043,5.81049422755474,2.61701557230111,7.59899634504932,0.631719873426831,5.22371256399677,0.245733936501509,0.697801167972428,0,0.263766978228454,3.21792517696121,2.31978163009541,2.01697543935533,0.602694528023977,0,0.975865597581014,1.84681587115182,3.87601313364081,0.940364164434263,1.14494394852423,0.958120975510189,0.376627918784408,0,0,0,0,0,0.154816123316076,0,0.30120591877825,0,0,0,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,1.34140171940727,3.45228916977532,0.722878304769133,5.0133791063589,1.88300474649071,1.5905718941022,3.89307896242109,13.991152940282,7.09534071880205,8.60780899792635,4.71524671791765,0,0,0,0,0,0,0,0,11.5282196272689,4.30117297553062,8.33137203858226,6.78369530308812,6.29249154314859,4.40188867104108,5.8518590630307,8.78616981175718,7.82685777910763,17.0707512509982,5.63961043952806,3.80136052859256,9.03029612928227,3.30896772311282,3.24056779152704,11.6089646769304,11.2264686313085,16.5538876310484,10.7321646226118,4.74632829784064,4.946447086121,0,0,0.436094052142534,1.98788780678127,3.29239330327907,7.81214166797991,10.6129549677061,1.77334191099179,4.48542080113846,1.06748995729705,4.19334832309172,9.64754209739275,6.33140158727534,9.80771418680752,7.26515652695671,15.55674996096,0.70296429550139,1.5608003841516,0,1.04614076386261,1.76151747965647,2.75184005425824,2.52811452064047,4.49139176760765,2.21101771161182,4.64966015290945,19.0080457165129,17.308685049499,0,2.15585442544872,2.69337782326506,2.37725187756732,5.54128230968366,5.26773145057006,4.90380473278431,17.5778528920718,4.53728732640084,5.02290979928813,9.8236398856541,4.87443372666992,5.40163972951924,3.91599611106068,5.66809188100384,5.02515512095292,8.94514560878711,3.41029518064195,10.0973509697646,12.4267363167104,4.20279747728911,8.52023022039874,2.72030665214629,2.37384829234683,0.773043412653187,0.272746120590835,1.14721838155602,1.95157929807353,1.59035721985782,1.97529702878181,3.00617059544574,0.504641701751257,0.72995471815166,18.7739438795779,7.07565032012174,2.76269842704961,4.64367928031979,2.16563844500876,1.77460200059766,1.51726221070292,1.44606617930089,1.21323370005633,1.74303555273925,1.42362371466658,1.07865046528132,1.17732879075208,0.38474715694639,5.16708818237254,4.20725321410337,2.4694440679884,4.41026134156626,1.26755034821831,0,2.95394953340702,0,0,3.60292401626904,0.219500570817251,0,0,0.462942225792648,0.651616610620649,2.07986957055916,2.88662684050547,0.927443239800615,4.22671299248958,10.1056513432752,7.40776820122577,14.6495697220641,3.95102198979638,2.57545848628462,0,0,0,0.93733833986777,0.335964256397719,0.141775097242386,0.53735113621709,0,0,0,0.088048434013226,0.621984346622316,0.864719720501769,0.12624243342638,0.063497894292169,0,0,1.71072446022705,0.308482478109971,0,0,4.37311228946907,2.1798003441664,5.35369486492935,4.52451005152222,3.57656445851882,3.381211010224,7.1803291477915,2.08014873822732,1.80045161983499,2.83698264046557,5.06202140130589,3.57444984145369,2.17048642156577,1.64648067356154,0.325736184293735,5.68627117988073,0,3.31583314765545,4.35766729300147,3.69900067373611,0,0,0,1.67737398844108,4.59447743336456,1.42636905040718,3.18518874668674,3.28762116080613,7.34149949283572,0,0.394061520403854,0.215627574859517,0.898401253958239,0.508189248444927,1.30139853857622,0.773288812777695,1.17261385734044,0.637938751653163,0,0,0,3.31267027641678,3.50119364741774,1.62759014219841,6.86303843051664,11.2410262942212,11.0391690523754,13.9398283841329,9.93122129101472,4.5481500811197,2.0694614258501,1.99267679560631,3.31864503375066,2.95404289191482,3.32861967686659,1.02943027143257,0,0.431428401637234,0.106727557803444,0.606255142892519,0,0.30239029332968,5.70647957983187,11.5096479966047,9.26178311629143,2.81906128362542,6.14048698880044,4.98647155545183,1.48418066444991,0.616838775210622,0.177561725313127,0.574890092096664,0,0.348631135379878,0,0.802025881213139,0.0920809889358963,0.918515585316854,2.73136752010076,1.96686622439136,0.451199612907412,0.308061348417659,0,1.46139224653261,0.105551628892876,4.54933536283586,2.55140557914773,8.42072072798343,3.08454505380579,2.98041081298238,1.50506932156456,0,0,0.223874754722178,0,0,0,0,0,5.35813260568156,20.786268513764,29.8684389712528,0,0.650060246036521,1.6068392984416,0.580024309752732,3.85121542786611,3.68408819342711,2.34322173223702,5.58585273315023,4.93056759308377,3.40906509664404,1.69160867728801,1.15699440752685,0.768760269460425,3.82838137483752,0.809262246844399,0,3.77774816196768,0,1.54016790088044,1.06461206063404,0.869932992075073,0.55597265731176,0.858749320451947,10.4204343420707,6.64396791909324,7.81583795087682,0.767693373934002,3.85145089230528,0.318203247925937,0,5.93579110024939,4.66712950551293,4.00562167975334,1.2130948894399,1.58510321173008,0.842516912477962,2.92580243453754,0.974853958525138,1.05650146756755,1.9109987597118,1.69686518344455,2.26016233240486,1.65409603063837,1.32687795048244,3.06915619677634,1.73632660280006,1.9676842561399,0.811641507850816,0.6196469961995,0,2.29458163526482,3.7334635584986,0,1.06428319221179,2.9555068941673,2.30506425071931,0.379473173765715,2.0996083214699,0.673554789078584,1.34060455107157,0,6.7783536559281,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355709216742071,0,0,0,0,0,0,0,0,0,10.1575066680962,0,0,0,0,0,0,0,0,0,0,3.51592382018778,1.33228787199128,4.22961015263549,0,6.73937624650712,0.36408156524854,0,0.284136146806413,0,1.78178808499583,0.307160702099232,1.9882952955326,5.76744607283102,4.67496561096205,0,0.211125408127993,13.9473591775749,4.42054264849836,0,3.57940388757542,0,4.0435146396035,2.15684042753584,0,0,7.00368180022229,0,2.22273980289274,1.93866549219044,2.87581104301739,7.98455192004777,0,0.262379999988587,5.79999660347835,0,0.508507300585533,0,1.37897349296586,15.1634398959292,2.43074992906609,2.65722415744152,2.29133233388275,0,2.65390223834939,2.65992857058193,5.26524953169534,0,0.139423744278603,8.31062791841008,1.93701494939902,0,0,0,0.638002319463839,1.37396390102793,0,1.02193298195737,0.156980256395025,0,0,0,0,0,1.11255605286265,1.26598838716816,1.30586246527318,0,0.649165919226273,6.96683351754953,7.07660516026713,6.72133159426988,2.6686901581256,0.988511511572023,0.730953646538188,5.52689290441552,24.0773294189637,3.27970224015475,0,0.19566461893209,0.242780379534093,3.15667522279512,10.8891644443797,5.50930970934882,16.2389509645214,0.450970258243478,0.72581733978073,0,0.992975867626496,0.313932918407225,0,0,1.38674673013139,0.173559738335131,0.489961987071888,1.48000651186684,7.33852006616527,12.554980370428,0.19351266257817,0.438535902517113,0.246346371159628,5.91633000579358,0,5.87549926029384,0.822251547880505,0.397429223405979,2.59574263419103,0,2.16428814679141,7.89776080535604,0.799238438328521,0,8.47570811627776,1.20116498503375,0.14405479798815,0.621262677827163,0,0.815425236441684,1.46443984837266,1.63197148218115,0.866851769704557,6.00420288709789,7.66670121795161,0,12.0334323597588,1.8402114799552,32.3967585475815,20.3952777370398,7.89660327034495,4.99197501247478,4.29226048136571,6.4719722658143,10.8837225428497,1.08089965062721,0,0.157566364614447,0.247247575143499,0.0674035438541849,0,0,5.56660782866512,7.21878052391351,3.21506296930038,1.78801267576404,2.9080823662043,0,0,2.36923270966296,0,3.78267395036151,15.8412856167694,2.64000841298516,0,2.1110671705139,7.86164859010704,2.64836788146173,0,2.17199840701485,2.5926644736038,2.28611152076586,4.7892076624995,0.246277562248017,3.23737241392301,0.79318464064088,1.17241786942466,1.32506888912221,3.36135686540031,6.21493228190643,0.342173675768659,0.704815022316672,9.61086713109252,22.6374199343519,4.55662960881915,1.9846640872478,0,0,0,5.98419583706421,2.0055191521816,2.14441903734423,2.95085367638824,0,0.886068179966986,1.58634144372552,3.755727921195,3.44045517414043,9.42896938063245,3.91207338530716,1.66018361923477,0.124980407962107,0.303298235083296,0,0.235265819698172,1.40500471742064,7.82573554498456,0.447764408660622,0.233713309847224,0.554805861502613,1.13641803165053,1.50940741051545,0,0.457680136793847,1.51230923763239,0.310874401165561,0.443565449968902,1.43367090447332,0.899606224327209,0.465788870628778,0.829412415681711,1.32920857278997,4.17396049449387,4.50772826991655,9.13932509205109,1.22061219961398,1.09109195521536,2.36303225493475,4.17630383890644,2.78667122089031,2.80019435264208,3.09056134664514,3.36749488765919,6.30924491143255,0.770479321629213,8.3632220636221,0.260994291965212,4.76082443575772,0.926089897295336,0.734210113519403,1.61179956973339,0,0.877136198314828,0.883445729729405,0.38582807654183,1.35153952522458,0,1.72715170865599,2.73473960559644,5.80685431837269,0,0,0,1.96565909307848,2.94927490504463,0.211312123358627,0,0,0,4.54012762853469,1.47284760201473,0.139879507719444,0,0.127894371303652,2.15649622793364,4.08891448825331,0.655257829152084,11.3720795069197,45.9161827419635,25.5307674373544,35.7532747502876,1.90802610392051,0,0.80057074828547,12.6963339728646,9.79985527530241,2.24802287837608,2.8339315265117,4.46974805360024,2.66651273512982,13.6118715959728,2.28218933131919,1.93770774758221,4.28308260777463,0.490738592505128,0,0.366857197043358,1.96393632455575,3.81382095467167,0,10.3436435500463,4.36219904425692,0,0.781514011233092,0,0.982631505060581,1.03499260351932,2.566428215499,5.46754669029693,4.54710952302605,2.7902956485319,7.65764732625507,1.64477330057155,13.8939129949002,1.58284119923659,0.255524855279191,1.07140367175657,2.01770233331294,2.42786241694653,0.455324382702595,3.45939243634291,0.691403925334676,21.0930251608025,2.03909198930495,1.97318320688547,2.48207065856333,0.333694205676207,9.02670567780911,1.88538707899202,0,25.5684441742659,1.72742072974897,0.47775168788705,6.14698279919245,0,0,0.869291361512897,0.801711364730253,2.27937780579341,7.8530499463217,12.4426739126537,1.29068207646083,0.946656005844523,1.36341447614652,2.9637093513365,2.2910686854405,0,0,0,0,0.609589624911347,1.29485767437579,3.79852385368114,19.7168453327494,30.5997925627258,0.233939463462106,3.58111395290463,1.78380136166353,0.45178432815584,0,0,3.08696632431779,10.9279780251979,0,11.0316744789257,0,4.90771167787363,5.04978880556046,11.8343603723352,1.35941691750254,5.92098683273078,13.1494091466097,0,0,1.41157948686277,2.16651690060754,9.49437304720472,4.12856355064087,9.60375207114724,2.20880187070458,2.7876510978275,6.98161104544604,12.6966441723696,1.48798007266701,2.77305377178851,2.59575937274273,1.13549782351571,0.546327859818478,6.96841755562903,0.305966489225945,0.534434810531121,0.551369397209069,0,5.22873017705852,1.33982065078089,2.48750831837634,9.51583561929436,8.74259325794022,28.8057962071126,0.645889098360061,1.11734485732544,0.897054900644907,3.24600507218641,7.68045318041233,6.96693593270276,10.2669990325584,2.22261774948139,5.52260981523608,23.6188853147669,0.651226148887796,6.61709544441836,1.9307228228694,0,7.03922827210363,5.01189921149752,13.0206777061036,7.32332451604064,5.63566622054873,0 | |||
|short_description=p@chr4:126236103..126236150,+ | |||
}} |
Latest revision as of 01:28, 30 July 2015
Short description: | p@chr4:126236103..126236150, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:126236103..126236150, + |
Coexpression cluster: | C4367_rectum_neuroectodermal_skeletal_neuroepithelioma_diaphragm_skin_throat |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 7.16e-12 | 24 |
endothelial cell | 2.61e-09 | 36 |
fibroblast | 8.25e-09 | 76 |
blood vessel endothelial cell | 1.64e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.64e-08 | 18 |
meso-epithelial cell | 3.12e-08 | 45 |