FFCP PHASE1:Mm9::chr14:75684150..75684197,+: Difference between revisions
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{{FFCP|EntrezGene=67302|HGNC=|MCL_coexpression_id=1107|UniProt=E9Q784,E9PW62,Q8BHW0,B9EHN9|association_with_transcript=0bp_to_ENSMUST00000022577,ENSMUST00000165404,NM_026083,uc007uqs.1,uc007uqt.2_5end|description=CAGE_peak_1_at_Zc3h13_5end|id=chr14:75684150..75684197,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!1.14e-17!94;UBERON:0007811!6.25e-16!86;UBERON:0003056!1.40e-11!49;UBERON:0000033!1.50e-11!63;UBERON:0000955!1.71e-11!50;UBERON:0006238!1.71e-11!50;UBERON:0002616!5.78e-11!49;UBERON:0002791!1.88e-10!29;UBERON:0003528!1.88e-10!29;UBERON:0001893!1.88e-10!29;UBERON:0003080!3.73e-10!40;UBERON:0002020!9.07e-10!34;UBERON:0002780!1.02e-09!39;UBERON:0001890!1.02e-09!39;UBERON:0006240!1.02e-09!39;UBERON:0001049!1.03e-09!52;UBERON:0005068!1.03e-09!52;UBERON:0006241!1.03e-09!52;UBERON:0007135!1.03e-09!52;UBERON:0000956!7.66e-09!21;UBERON:0001869!7.66e-09!21;UBERON:0000203!7.66e-09!21;UBERON:0001017!8.11e-09!73;UBERON:0005743!8.11e-09!73;UBERON:0000073!5.91e-08!75;UBERON:0001016!5.91e-08!75;UBERON:0002021!6.22e-08!10;UBERON:0000411!6.22e-08!10;UBERON:0001950!6.22e-08!10;UBERON:0002346!9.59e-08!71;UBERON:0003075!9.59e-08!71;UBERON:0007284!9.59e-08!71;UBERON:0002619!5.79e-07!17;UBERON:0004121!6.82e-07!102;UBERON:0000924!6.82e-07!102;UBERON:0006601!6.82e-07!102|ontology_enrichment_uberon_v019_2=UBERON:0003056,1.40e-11,49;UBERON:0000073,1.16e-10,54;UBERON:0003528,1.88e-10,29;UBERON:0002791,1.88e-10,29;UBERON:0001893,1.88e-10,29;UBERON:0002346,2.19e-10,64;UBERON:0003075,2.19e-10,64;UBERON:0007284,2.19e-10,64;UBERON:0010371,3.49e-10,73;UBERON:0003080,3.73e-10,40;UBERON:0000955,4.00e-10,47;UBERON:0006238,4.00e-10,47;UBERON:0002020,9.07e-10,34;UBERON:0002780,1.02e-09,39;UBERON:0001890,1.02e-09,39;UBERON:0006240,1.02e-09,39;UBERON:0001049,1.03e-09,52;UBERON:0005068,1.03e-09,52;UBERON:0006241,1.03e-09,52;UBERON:0007135,1.03e-09,52;UBERON:0002616,1.29e-09,46;UBERON:0000956,7.66e-09,21;UBERON:0001869,7.66e-09,21;UBERON:0000203,7.66e-09,21;UBERON:0004121,8.10e-09,95;UBERON:0000924,8.10e-09,95;UBERON:0006601,8.10e-09,95;UBERON:0001017,8.11e-09,73;UBERON:0001016,5.91e-08,75;UBERON:0002021,6.22e-08,10;UBERON:0000411,6.22e-08,10;UBERON:0001950,6.22e-08,10;UBERON:0002619,5.79e-07,17|phase1_expression=28.8267924788629,21.9854506812797,33.2149444754361,29.0365642854557,26.5474736871564,20.4812711732506,20.7915250130018,48.6794929374743,52.9365595290267,55.9414217909564,28.5934006936593,39.3276743847008,48.6210073004624,46.2453928796496,26.9818907070687,31.383666445423,19.5877325875881,37.224535512272,41.5456733825389,32.2536135366503,20.66551950671,17.6737893137576,19.3287843962812,16.9591968161011,12.3881011776272,17.8011908875656,12.4920978886132,20.4697671051595,11.7814520062952,15.3738379153558,9.97787297948871,13.3356441426523,11.6862309641068,0,20.2196133825892,13.7974755647549,16.3335485009895,46.8755426425337,21.8773896466664,31.9349483824017,41.176204162171,39.6166381275899,43.2104214197727,32.3554822197234,27.777279154147,27.3484660720905,20.342174953049,8.93903141159831,7.24964403023757,16.9154012194627,9.37909024889929,11.5002051491977,35.4021298781824,65.282592781021,53.4389140636518,19.0371982666601,25.5014761545493,14.9544906760458,36.6192794155872,48.138179113755,32.9592329823213,9.82649143000483,9.78224275722253,6.29929802096979,10.8775299882367,12.0781619540837,7.78960287347852,12.2949857702897,47.1787736003573,39.1517221161903,43.9579169224388,19.4242669394586,19.436431603742,38.0946385558507,35.9420516318386,38.6071890376209,46.2486700197433,44.6905683298157,46.3891730433855,39.3021137435978,34.9482798561205,42.1939830150976,20.9387249251036,36.5795696520592,38.8107549353098,45.0781735774712,37.8708670925614,34.2974980318553,17.3412982732991,20.3287496687253,54.7843883646171,13.7667820317022,11.5595126730318,7.55584468292944,12.9955283489534,11.6486990645307,19.3813299781818,23.3489541931939,14.8078022623635,12.3668851078619,21.4081998060554,26.9485602570067,50.9610479413291,63.9960032837998,18.185247444942,19.5087096415826,16.6823066854878,19.6396273116783,96.3248927167479,21.8209944425292,17.0015620230813,23.748307308347,15.2206228188999,21.8547828801303,30.9258299766904,18.0959891514733,23.4835219347655,39.9094225098956,30.9613693182456,26.6915302413225,23.4092009568017,31.5168914537894,9.31958806090611,39.2326267995473,34.7681533310335,19.6701932510615,33.3086046126458,24.5960119707297,29.480292680951,44.4878199032323,45.7500602818627,41.5915905493581,57.188201343259,69.0431734791892,40.1030925999951,51.2682391294114,28.3113431503879,26.4986847399498,24.2613848096328,32.1976039506305,36.8240853584452,25.5191335921155,32.2311212351575,31.7987165633359,40.5497534941914,43.4305511765641,33.8263225660621,48.1188269574569,34.0597428833891,39.1449585947386,33.6066647153142,23.0155519048954,37.8144258946813,32.7357036530837,35.1887453257583,31.4474141573219,23.87524836865,18.786397219374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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=67302 | |||
|HGNC= | |||
|MCL_coexpression_id=1107 | |||
|TSSclassifier=NA | |||
|UniProt=E9Q784,E9PW62,Q8BHW0,B9EHN9 | |||
|association_with_transcript=0bp_to_ENSMUST00000022577,ENSMUST00000165404,NM_026083,uc007uqs.1,uc007uqt.2_5end | |||
|cluster_id=chr14:75684150..75684197,+ | |||
|description=CAGE_peak_1_at_Zc3h13_5end | |||
|id=chr14:75684150..75684197,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!1.14e-17!94;UBERON:0007811!6.25e-16!86;UBERON:0003056!1.40e-11!49;UBERON:0000033!1.50e-11!63;UBERON:0000955!1.71e-11!50;UBERON:0006238!1.71e-11!50;UBERON:0002616!5.78e-11!49;UBERON:0002791!1.88e-10!29;UBERON:0003528!1.88e-10!29;UBERON:0001893!1.88e-10!29;UBERON:0003080!3.73e-10!40;UBERON:0002020!9.07e-10!34;UBERON:0002780!1.02e-09!39;UBERON:0001890!1.02e-09!39;UBERON:0006240!1.02e-09!39;UBERON:0001049!1.03e-09!52;UBERON:0005068!1.03e-09!52;UBERON:0006241!1.03e-09!52;UBERON:0007135!1.03e-09!52;UBERON:0000956!7.66e-09!21;UBERON:0001869!7.66e-09!21;UBERON:0000203!7.66e-09!21;UBERON:0001017!8.11e-09!73;UBERON:0005743!8.11e-09!73;UBERON:0000073!5.91e-08!75;UBERON:0001016!5.91e-08!75;UBERON:0002021!6.22e-08!10;UBERON:0000411!6.22e-08!10;UBERON:0001950!6.22e-08!10;UBERON:0002346!9.59e-08!71;UBERON:0003075!9.59e-08!71;UBERON:0007284!9.59e-08!71;UBERON:0002619!5.79e-07!17;UBERON:0004121!6.82e-07!102;UBERON:0000924!6.82e-07!102;UBERON:0006601!6.82e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,1.40e-11,49;UBERON:0000073,1.16e-10,54;UBERON:0003528,1.88e-10,29;UBERON:0002791,1.88e-10,29;UBERON:0001893,1.88e-10,29;UBERON:0002346,2.19e-10,64;UBERON:0003075,2.19e-10,64;UBERON:0007284,2.19e-10,64;UBERON:0010371,3.49e-10,73;UBERON:0003080,3.73e-10,40;UBERON:0000955,4.00e-10,47;UBERON:0006238,4.00e-10,47;UBERON:0002020,9.07e-10,34;UBERON:0002780,1.02e-09,39;UBERON:0001890,1.02e-09,39;UBERON:0006240,1.02e-09,39;UBERON:0001049,1.03e-09,52;UBERON:0005068,1.03e-09,52;UBERON:0006241,1.03e-09,52;UBERON:0007135,1.03e-09,52;UBERON:0002616,1.29e-09,46;UBERON:0000956,7.66e-09,21;UBERON:0001869,7.66e-09,21;UBERON:0000203,7.66e-09,21;UBERON:0004121,8.10e-09,95;UBERON:0000924,8.10e-09,95;UBERON:0006601,8.10e-09,95;UBERON:0001017,8.11e-09,73;UBERON:0001016,5.91e-08,75;UBERON:0002021,6.22e-08,10;UBERON:0000411,6.22e-08,10;UBERON:0001950,6.22e-08,10;UBERON:0002619,5.79e-07,17 | |||
|phase1_expression=28.8267924788629,21.9854506812797,33.2149444754361,29.0365642854557,26.5474736871564,20.4812711732506,20.7915250130018,48.6794929374743,52.9365595290267,55.9414217909564,28.5934006936593,39.3276743847008,48.6210073004624,46.2453928796496,26.9818907070687,31.383666445423,19.5877325875881,37.224535512272,41.5456733825389,32.2536135366503,20.66551950671,17.6737893137576,19.3287843962812,16.9591968161011,12.3881011776272,17.8011908875656,12.4920978886132,20.4697671051595,11.7814520062952,15.3738379153558,9.97787297948871,13.3356441426523,11.6862309641068,0,20.2196133825892,13.7974755647549,16.3335485009895,46.8755426425337,21.8773896466664,31.9349483824017,41.176204162171,39.6166381275899,43.2104214197727,32.3554822197234,27.777279154147,27.3484660720905,20.342174953049,8.93903141159831,7.24964403023757,16.9154012194627,9.37909024889929,11.5002051491977,35.4021298781824,65.282592781021,53.4389140636518,19.0371982666601,25.5014761545493,14.9544906760458,36.6192794155872,48.138179113755,32.9592329823213,9.82649143000483,9.78224275722253,6.29929802096979,10.8775299882367,12.0781619540837,7.78960287347852,12.2949857702897,47.1787736003573,39.1517221161903,43.9579169224388,19.4242669394586,19.436431603742,38.0946385558507,35.9420516318386,38.6071890376209,46.2486700197433,44.6905683298157,46.3891730433855,39.3021137435978,34.9482798561205,42.1939830150976,20.9387249251036,36.5795696520592,38.8107549353098,45.0781735774712,37.8708670925614,34.2974980318553,17.3412982732991,20.3287496687253,54.7843883646171,13.7667820317022,11.5595126730318,7.55584468292944,12.9955283489534,11.6486990645307,19.3813299781818,23.3489541931939,14.8078022623635,12.3668851078619,21.4081998060554,26.9485602570067,50.9610479413291,63.9960032837998,18.185247444942,19.5087096415826,16.6823066854878,19.6396273116783,96.3248927167479,21.8209944425292,17.0015620230813,23.748307308347,15.2206228188999,21.8547828801303,30.9258299766904,18.0959891514733,23.4835219347655,39.9094225098956,30.9613693182456,26.6915302413225,23.4092009568017,31.5168914537894,9.31958806090611,39.2326267995473,34.7681533310335,19.6701932510615,33.3086046126458,24.5960119707297,29.480292680951,44.4878199032323,45.7500602818627,41.5915905493581,57.188201343259,69.0431734791892,40.1030925999951,51.2682391294114,28.3113431503879,26.4986847399498,24.2613848096328,32.1976039506305,36.8240853584452,25.5191335921155,32.2311212351575,31.7987165633359,40.5497534941914,43.4305511765641,33.8263225660621,48.1188269574569,34.0597428833891,39.1449585947386,33.6066647153142,23.0155519048954,37.8144258946813,32.7357036530837,35.1887453257583,31.4474141573219,23.87524836865,18.7863972193742,19.6072814582959,23.4052122965117,25.3288144779584,24.8485644816201,21.7805156738393,26.3664070541521,21.7516629171203,28.6016752043002,23.0715125203672,26.6224980597146,23.2029388378007,27.7443014293671,34.9406569142638,32.4563972084238,32.7129671783665,28.3175543584384,48.3666881697493,46.307075570678,34.363553430315,21.4204958997471,29.8603550749328,30.4230040137174,25.6446248030966,26.6222252502812,27.7972554806088,21.1150444984941,23.2519240156811,20.5873693405014,35.1869292320377,39.9902508802713,33.1438948102504,25.1669434423182,33.5013977305776,31.0660386276813,15.9321036800589,34.5030508081381,32.6852433451933,32.1769097995597,27.3473006906352,28.9660936147016,26.7490552035608,27.0126570802672,21.351826986427,22.4582838337677,12.7474629647474,27.8631326545877,25.15955137449,26.7585913737976,26.7775360232824,21.7059443777175,17.8238096246994,20.7141218964584,24.1581487894803,14.0026320725922,25.8782771749238,16.3742016974142,15.601883655728,14.1444171650383,11.4814344654024,11.5786445127208,29.93001680699,26.1498148243269,29.8225906888907,31.9120761257354,36.8463689812948,32.1612014288286,29.0413241880937,23.8063050386515,41.7733131881406,37.2060678609942,31.412589425525,35.7222026080309,32.4647765907884,33.8478797080737,36.1899081454253,14.6854534631052,14.2611639175521,24.5583704211212,34.8394780273509,35.8667760972142,9.50822683184717,27.5193310652767,22.4010835785542,17.5697434933487,34.252320239515,24.8527549870654,38.0985732680894,36.2337959409706,28.7415598189175,32.1481443702443,30.4371589018823,53.6606598424418,31.9365191718604,24.2169220987467,30.9485222771795,34.9736660701775,13.2745138339963,24.5208442516531,21.4649725444973,20.5579536933929,18.0134154657271,19.3684143204674,27.1349707826632,26.9014959813354,23.8853243517763,19.2782422340848,17.9211634577498,20.6271086496374,35.405718998394,36.3723409943247,27.424040961944,26.5777923439174,26.9557155136256,31.3929118979644,27.15058839935,21.6170113871366,19.477751769288,21.6068712281097,19.4064990288366,65.7896149236505,36.1680315798828,37.152761755744,29.9624583447873,36.4392797434036,26.8162369699463,40.2372905362806,27.6810826892521,29.3069352507776,32.0386532349601,31.6459007767881,44.9724009202173,26.9958244383697,37.565233028642,47.0236879807491,42.9801918531758,10.5013767981662,27.3630634447682,28.26140593063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| |||
|short_description=p1@Zc3h13 | |||
}} |
Latest revision as of 09:57, 26 September 2015
Short description: | p1@Zc3h13 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Zc3h13_5end |
Coexpression cluster: | MCL_coexpression_mm9:1107 |
Association with transcript: | 0bp_to_ENSMUST00000022577, ENSMUST00000165404, NM_026083, uc007uqs.1, uc007uqt.2_5end |
EntrezGene: | Zc3h13 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pre-chordal neural plate | 1.40e-11 | 49 |
regional part of nervous system | 1.16e-10 | 54 |
brain grey matter | 1.88e-10 | 29 |
regional part of telencephalon | 1.88e-10 | 29 |
telencephalon | 1.88e-10 | 29 |
neurectoderm | 2.19e-10 | 64 |
neural plate | 2.19e-10 | 64 |
presumptive neural plate | 2.19e-10 | 64 |
ecto-epithelium | 3.49e-10 | 73 |
anterior neural tube | 3.73e-10 | 40 |
brain | 4.00e-10 | 47 |
future brain | 4.00e-10 | 47 |
gray matter | 9.07e-10 | 34 |
regional part of forebrain | 1.02e-09 | 39 |
forebrain | 1.02e-09 | 39 |
future forebrain | 1.02e-09 | 39 |
neural tube | 1.03e-09 | 52 |
neural rod | 1.03e-09 | 52 |
future spinal cord | 1.03e-09 | 52 |
neural keel | 1.03e-09 | 52 |
regional part of brain | 1.29e-09 | 46 |
cerebral cortex | 7.66e-09 | 21 |
cerebral hemisphere | 7.66e-09 | 21 |
pallium | 7.66e-09 | 21 |
ectoderm-derived structure | 8.10e-09 | 95 |
ectoderm | 8.10e-09 | 95 |
presumptive ectoderm | 8.10e-09 | 95 |
central nervous system | 8.11e-09 | 73 |
nervous system | 5.91e-08 | 75 |
occipital lobe | 6.22e-08 | 10 |
visual cortex | 6.22e-08 | 10 |
neocortex | 6.22e-08 | 10 |
regional part of cerebral cortex | 5.79e-07 | 17 |