FFCP PHASE1:Hg19::chr4:40192677..40192712,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=399 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=686 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=4bp_to_ENST00000505618_5end | |||
|cluster_id=chr4:40192677..40192712,+ | |||
|coexpression_cluster_id=C496 | |||
|description=CAGE_peak_4_at_RHOH_5end | |||
|id=chr4:40192677..40192712,+ | |||
|ontology_enrichment_celltype=CL:0000084!6.81e-23!25;CL:0000827!6.81e-23!25;CL:0000791!3.05e-22!18;CL:0000789!3.05e-22!18;CL:0002420!3.05e-22!18;CL:0002419!3.05e-22!18;CL:0000790!3.05e-22!18;CL:0000542!5.19e-21!53;CL:0000051!5.19e-21!53;CL:0000838!9.27e-20!52;CL:0000625!8.49e-16!11;CL:0000738!2.22e-11!140;CL:0002087!2.52e-11!119;CL:0000624!1.30e-09!6;CL:0002031!1.59e-09!124;CL:0000037!8.80e-09!172;CL:0000566!8.80e-09!172;CL:0000898!6.77e-08!3;CL:0000988!8.68e-08!182;CL:0002032!6.96e-07!165;CL:0000837!6.96e-07!165;CL:0000842!7.03e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000084;8.37e-37;25!CL:0000791;3.54e-34;18!CL:0000789;3.54e-34;18!CL:0002419;3.54e-34;18!CL:0000625;5.14e-22;11!CL:0000624;4.31e-16;6!CL:0000898;1.05e-12;3!CL:0000542;2.76e-10;53!CL:0000815;2.84e-09;2!CL:0000792;2.84e-09;2!CL:0002677;2.84e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,7.41e-37,25;CL:0000827,7.41e-37,25;CL:0000791,3.40e-34,18;CL:0000789,3.40e-34,18;CL:0002420,3.40e-34,18;CL:0002419,3.40e-34,18;CL:0000790,3.40e-34,18;CL:0000625,5.15e-22,11;CL:0000838,8.59e-18,52;CL:0000542,2.22e-17,53;CL:0000051,2.22e-17,53;CL:0000624,4.11e-16,6;CL:0000898,9.16e-13,3;CL:0000815,2.95e-09,2;CL:0000792,2.95e-09,2;CL:0002677,2.95e-09,2;CL:0002087,1.24e-07,115 | |||
|ontology_enrichment_development_v019=CL:0000790;3.54e-34;18!CL:0000051;2.76e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.09e-12!15;UBERON:0000179!1.09e-12!15;UBERON:0000463!1.09e-12!15;UBERON:0004177!4.97e-11!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.95e-15;15!UBERON:0000179;7.95e-15;15!UBERON:0000463;7.95e-15;15!UBERON:0002370;9.32e-10;2!UBERON:0005058;9.32e-10;2!UBERON:0009113;9.32e-10;2!UBERON:0002390;2.87e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,8.86e-15,15;UBERON:0000179,8.86e-15,15;UBERON:0000463,8.86e-15,15;UBERON:0002370,4.81e-10,4;UBERON:0005058,4.81e-10,4;UBERON:0009113,4.81e-10,4;UBERON:0003295,4.81e-10,4;UBERON:0005562,4.81e-10,4;UBERON:0003351,8.13e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0,0.236132343941038,0,0,0,0,0,0,0,1.13735385989937,0,0,0,0.434021741431704,0.223915474239924,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,1.37696839079683,0,2.2616164889946,10.8671222003941,6.51844533267181,8.04861269749047,13.6378709885538,4.12218690475142,5.00830042707223,4.87374568083967,4.87446954777028,5.37983542847836,3.25148368899696,4.43982342429925,2.21080014228679,6.37566788617116,9.49034004237187,6.68852070224283,6.27213142829861,2.37949619664889,2.68254345521345,6.52892146416997,1.51811815211702,4.45991580053735,2.60433381542567,5.70271226669025,5.11955404864427,4.22355816809581,6.24653632761729,3.55165878066025,3.28451198768419,0,0,0.724122019413995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.27072508770766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0.215627574859517,0.898401253958239,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,2.37285620900479,0.213455115606889,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52234282769651,2.29391162142713,0,3.57347663186684,4.52498500394814,1.29694662238543,2.16012574895246,0.79312517629427,0.213648142254946,0,0,0.557409525377156,0.144269212976445,9.24843963529383,1.59426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38141957765574,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0.260427761085233,2.27395999990109,0.724999575434793,0,0,0,0,1.16641845353302,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,18.3947936752326,0.156980256395025,0,0,0,0,0.37950746544837,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0.789168805698781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353024506766001,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,1.65695622138878,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0.509197589862076,0,0.247871528518004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0.23248285073625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281951753939561,0.322289439867886,0.399764623699716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714193294391221,34.8134224016073,20.4846557176331,0,0,0,0,0,1.0776328482334,0,0,0,0,0,0,0,0.122241444182866,0,0,2.41528552309231,0 | |||
|short_description=p4@RHOH | |||
}} |
Latest revision as of 17:58, 17 September 2015
Short description: | p4@RHOH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RHOH_5end |
Coexpression cluster: | C496_thymus_CD4_CD8_hairy_vein_chronic_Peripheral |
Association with transcript: | 4bp_to_ENST00000505618_5end |
EntrezGene: | RHOH |
HGNC: | 686 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 7.41e-37 | 25 |
pro-T cell | 7.41e-37 | 25 |
mature alpha-beta T cell | 3.40e-34 | 18 |
alpha-beta T cell | 3.40e-34 | 18 |
immature T cell | 3.40e-34 | 18 |
mature T cell | 3.40e-34 | 18 |
immature alpha-beta T cell | 3.40e-34 | 18 |
CD8-positive, alpha-beta T cell | 5.15e-22 | 11 |
lymphoid lineage restricted progenitor cell | 8.59e-18 | 52 |
lymphocyte | 2.22e-17 | 53 |
common lymphoid progenitor | 2.22e-17 | 53 |
CD4-positive, alpha-beta T cell | 4.11e-16 | 6 |
naive T cell | 9.16e-13 | 3 |
regulatory T cell | 2.95e-09 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.95e-09 | 2 |
naive regulatory T cell | 2.95e-09 | 2 |
nongranular leukocyte | 1.24e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
blood | 8.86e-15 | 15 |
haemolymphatic fluid | 8.86e-15 | 15 |
organism substance | 8.86e-15 | 15 |
thymus | 4.81e-10 | 4 |
hemolymphoid system gland | 4.81e-10 | 4 |
thymic region | 4.81e-10 | 4 |
pharyngeal gland | 4.81e-10 | 4 |
thymus primordium | 4.81e-10 | 4 |
pharyngeal epithelium | 8.13e-07 | 6 |