FFCP PHASE1:Hg19::chrX:13778731..13778742,+: Difference between revisions
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|id=chrX:13778731..13778742,+
|short_description=p7@OFD1
|description=CAGE_peak_7_at_OFD1_5end
|association_with_transcript=-16bp_to_ENST00000464463_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8481 | |EntrezGene=8481 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2567 | |HGNC=2567 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-16bp_to_ENST00000464463_5end | |||
|cluster_id=chrX:13778731..13778742,+ | |||
|coexpression_cluster_id=C44 | |||
|description=CAGE_peak_7_at_OFD1_5end | |||
|id=chrX:13778731..13778742,+ | |||
|ontology_enrichment_celltype=CL:0000784!9.75e-11!3 | |||
|ontology_enrichment_celltype_v019=CL:0000784;2.33e-118;3!CL:0000451;3.85e-33;10!CL:0000840;5.54e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,2.33e-118,3;CL:0000451,3.85e-33,10;CL:0000840,5.54e-08,5;CL:0001029,5.54e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.70e-40;1!UBERON:0003056;1.96e-14;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p7@OFD1 | |||
}} | }} |
Latest revision as of 16:09, 19 September 2015
Short description: | p7@OFD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_OFD1_5end |
Coexpression cluster: | C44_Dendritic_CD19_CD133_granulocyte_acute_thymus_immature |
Association with transcript: | -16bp_to_ENST00000464463_5end |
EntrezGene: | OFD1 |
HGNC: | 2567 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 2.33e-118 | 3 |
dendritic cell | 3.85e-33 | 10 |
immature conventional dendritic cell | 5.54e-08 | 5 |
common dendritic progenitor | 5.54e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 3.30e-40 | 1 |
cranial nerve | 3.30e-40 | 1 |
nerve trunk | 3.30e-40 | 1 |
nerve connecting eye with brain | 3.30e-40 | 1 |
nerve | 3.30e-40 | 1 |
retinal neural layer | 3.30e-40 | 1 |
presumptive neural retina | 3.30e-40 | 1 |
Ammon's horn | 5.70e-21 | 2 |
lobe parts of cerebral cortex | 5.70e-21 | 2 |
hippocampal formation | 5.70e-21 | 2 |
limbic lobe | 5.70e-21 | 2 |
neural tissue | 6.96e-21 | 2 |
multi cell component structure | 6.96e-21 | 2 |
neuron projection bundle | 6.96e-21 | 2 |
layer of retina | 3.79e-11 | 4 |
limbic system | 3.22e-09 | 5 |
retina | 7.25e-08 | 6 |
photoreceptor array | 7.25e-08 | 6 |
posterior segment of eyeball | 7.25e-08 | 6 |