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FFCP PHASE1:Mm9::chr17:46169315..46169332,-: Difference between revisions

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{{FFCP|EntrezGene=22339|HGNC=|MCL_coexpression_id=3102|UniProt=F8WH10,Q00731,E9QLP5,F8WH81,F6ZE01|association_with_transcript=0bp_to_ENSMUST00000071648,ENSMUST00000074629,ENSMUST00000113518,ENSMUST00000142351,ENSMUST00000164714,ENSMUST00000167860,NM_001025250,NM_001025257,NM_009505,uc008crn.2,uc008cro.2,uc008crp.2,uc008crr.2_5end|description=CAGE_peak_1_at_Vegfa_5end|id=chr17:46169315..46169332,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009569!1.01e-11!66;UBERON:0005177!1.44e-10!85;UBERON:0002100!2.80e-08!98;UBERON:0005178!3.08e-08!17;UBERON:0005181!3.08e-08!17;UBERON:0002224!3.08e-08!17;UBERON:0000915!3.08e-08!17;UBERON:0008947!3.08e-08!17;UBERON:0003258!3.08e-08!17;UBERON:0005157!2.24e-07!27;UBERON:0002048!4.82e-07!14;UBERON:0000117!4.82e-07!14;UBERON:0000171!4.82e-07!14;UBERON:0000170!4.82e-07!14;UBERON:0005597!4.82e-07!14;UBERON:0000118!4.82e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0005177,1.12e-13,79;UBERON:0009569,1.01e-11,66;UBERON:0002100,1.34e-11,90;UBERON:0005178,3.08e-08,17;UBERON:0005181,3.08e-08,17;UBERON:0002224,3.08e-08,17;UBERON:0000915,3.08e-08,17;UBERON:0008947,3.08e-08,17;UBERON:0003258,3.08e-08,17;UBERON:0002048,4.82e-07,14;UBERON:0000117,4.82e-07,14;UBERON:0000171,4.82e-07,14;UBERON:0000170,4.82e-07,14;UBERON:0005597,4.82e-07,14;UBERON:0000118,4.82e-07,14|phase1_expression=33.6312578920067,176.581556265517,147.874752801599,320.007135562626,322.576850085448,42.4734557937081,46.9561407597007,2.1950964985068,147.546580814947,154.95071642516,61.2960326247308,32.3874965521066,1.36960583944965,1.83582845079895,7.66152452176024,7.08663435864391,0.699561878128147,1.73504190947031,1.64537320326887,2.12194825899015,131.647013153856,51.7305855756612,44.1427643644801,25.5987876469451,25.693839479523,100.490593720129,73.6603013432018,66.5806108999397,45.0355504111606,38.0565495937495,16.1863272778372,46.3572391625531,32.5984337419822,15.8481681015439,40.7280783849297,27.2624818387927,53.6965406970031,39.3419732892693,28.9094077473806,36.6466620781659,71.7642415397837,71.7197759206368,61.1743044819254,45.9523385610857,42.8824419058547,103.520368219188,46.1610893165343,31.3956225187843,9.22681967484782,13.026803237977,39.3361844767269,50.3133975277401,11.5769998179838,14.5072428402269,11.0910953717013,84.8956138918625,65.6161577459753,50.5358650431893,13.7575193384526,13.7537654610729,18.3811107016792,25.752184437254,13.3394219416671,79.6411249794038,57.3542490288845,71.7584916095561,26.9640099466564,15.3687322128622,19.1825782770684,14.850653216486,14.302097371894,21.9951257990929,17.8903518170807,13.229006315215,12.7474476454254,25.7381260250806,23.1243350098716,31.7941471832117,29.7996674517112,20.1786020227197,17.5656275716627,20.3156214517136,39.6439858581961,32.0774687718058,35.7547899797736,13.8475435172624,13.810053037513,13.4207600994216,28.397322499944,22.2936102315017,158.555875319818,94.6466264679525,475.979933595425,166.228583024448,202.730242243673,169.80219020989,94.6595391688007,34.9382161285018,21.3024523774352,30.3872034078893,16.9012103732017,39.7812079984385,20.3844191765317,14.2213340630666,148.512854133693,142.13488453153,144.579991274228,97.17048164092,51.26970096214,315.142661234623,62.9751736161073,97.124487581573,115.768979622541,151.325531114833,86.6628771590144,206.595876145986,117.911999609296,278.06456335699,43.3459170455438,56.4566306316458,83.036410941108,65.458159173255,67.101034038524,47.7232699128822,46.497168912587,76.892573617786,150.008535881412,74.987841374176,94.286108488214,50.1798642006156,64.5075849974263,18.4711897605911,52.3211203778752,38.6130340568799,56.3105600756408,46.0765187112432,24.4414473240759,48.6431255085464,58.1262344397452,121.004067134723,36.5638444725197,40.0029661714243,41.9544762446464,92.3820533332933,48.3739508965941,73.6653891637886,77.397624486336,97.0137640271309,22.8502072508813,56.9209301305136,44.867536661807,55.4565203041764,63.9508673218875,64.4266508066008,79.2261225170582,107.876572615623,84.9677956649014,55.5871479367785,76.72414483681,55.5097070395145,54.1755198556332,57.0796734831417,80.4932100989715,90.9050750673006,98.1138837963726,138.590231071243,163.378501452368,97.849356903688,151.559621770315,208.000176988214,227.235873157034,303.218773920139,253.141282930581,231.774485199162,38.6933505357994,30.0481468147511,244.840318190994,141.481053164996,40.9513441027649,62.7039014023184,51.031514683549,73.2111194382733,87.6169492748789,108.048155631934,101.074690108981,89.2668334604139,124.159593147333,98.4834536603697,132.575579241002,86.2866632308053,84.5099775010054,89.0161491447021,49.8826579506605,66.7211313640816,107.072348889426,89.402932924093,127.814689043465,92.7195538950011,168.778317584643,170.48972091644,167.360643878906,139.438795231635,227.082712348756,29.0310483946004,21.0318124771127,22.0364870137157,27.5889765088364,40.7589399981584,56.5269390954752,96.9535983209232,85.44526451044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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=22339
|HGNC=
|MCL_coexpression_id=3102
|TSSclassifier=NA
|UniProt=F8WH10,Q00731,E9QLP5,F8WH81,F6ZE01
|association_with_transcript=0bp_to_ENSMUST00000071648,ENSMUST00000074629,ENSMUST00000113518,ENSMUST00000142351,ENSMUST00000164714,ENSMUST00000167860,NM_001025250,NM_001025257,NM_009505,uc008crn.2,uc008cro.2,uc008crp.2,uc008crr.2_5end
|cluster_id=chr17:46169315..46169332,-
|description=CAGE_peak_1_at_Vegfa_5end
|id=chr17:46169315..46169332,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0009569!1.01e-11!66;UBERON:0005177!1.44e-10!85;UBERON:0002100!2.80e-08!98;UBERON:0005178!3.08e-08!17;UBERON:0005181!3.08e-08!17;UBERON:0002224!3.08e-08!17;UBERON:0000915!3.08e-08!17;UBERON:0008947!3.08e-08!17;UBERON:0003258!3.08e-08!17;UBERON:0005157!2.24e-07!27;UBERON:0002048!4.82e-07!14;UBERON:0000117!4.82e-07!14;UBERON:0000171!4.82e-07!14;UBERON:0000170!4.82e-07!14;UBERON:0005597!4.82e-07!14;UBERON:0000118!4.82e-07!14
|ontology_enrichment_uberon_v019_2=UBERON:0005177,1.12e-13,79;UBERON:0009569,1.01e-11,66;UBERON:0002100,1.34e-11,90;UBERON:0005178,3.08e-08,17;UBERON:0005181,3.08e-08,17;UBERON:0002224,3.08e-08,17;UBERON:0000915,3.08e-08,17;UBERON:0008947,3.08e-08,17;UBERON:0003258,3.08e-08,17;UBERON:0002048,4.82e-07,14;UBERON:0000117,4.82e-07,14;UBERON:0000171,4.82e-07,14;UBERON:0000170,4.82e-07,14;UBERON:0005597,4.82e-07,14;UBERON:0000118,4.82e-07,14
|phase1_expression=33.6312578920067,176.581556265517,147.874752801599,320.007135562626,322.576850085448,42.4734557937081,46.9561407597007,2.1950964985068,147.546580814947,154.95071642516,61.2960326247308,32.3874965521066,1.36960583944965,1.83582845079895,7.66152452176024,7.08663435864391,0.699561878128147,1.73504190947031,1.64537320326887,2.12194825899015,131.647013153856,51.7305855756612,44.1427643644801,25.5987876469451,25.693839479523,100.490593720129,73.6603013432018,66.5806108999397,45.0355504111606,38.0565495937495,16.1863272778372,46.3572391625531,32.5984337419822,15.8481681015439,40.7280783849297,27.2624818387927,53.6965406970031,39.3419732892693,28.9094077473806,36.6466620781659,71.7642415397837,71.7197759206368,61.1743044819254,45.9523385610857,42.8824419058547,103.520368219188,46.1610893165343,31.3956225187843,9.22681967484782,13.026803237977,39.3361844767269,50.3133975277401,11.5769998179838,14.5072428402269,11.0910953717013,84.8956138918625,65.6161577459753,50.5358650431893,13.7575193384526,13.7537654610729,18.3811107016792,25.752184437254,13.3394219416671,79.6411249794038,57.3542490288845,71.7584916095561,26.9640099466564,15.3687322128622,19.1825782770684,14.850653216486,14.302097371894,21.9951257990929,17.8903518170807,13.229006315215,12.7474476454254,25.7381260250806,23.1243350098716,31.7941471832117,29.7996674517112,20.1786020227197,17.5656275716627,20.3156214517136,39.6439858581961,32.0774687718058,35.7547899797736,13.8475435172624,13.810053037513,13.4207600994216,28.397322499944,22.2936102315017,158.555875319818,94.6466264679525,475.979933595425,166.228583024448,202.730242243673,169.80219020989,94.6595391688007,34.9382161285018,21.3024523774352,30.3872034078893,16.9012103732017,39.7812079984385,20.3844191765317,14.2213340630666,148.512854133693,142.13488453153,144.579991274228,97.17048164092,51.26970096214,315.142661234623,62.9751736161073,97.124487581573,115.768979622541,151.325531114833,86.6628771590144,206.595876145986,117.911999609296,278.06456335699,43.3459170455438,56.4566306316458,83.036410941108,65.458159173255,67.101034038524,47.7232699128822,46.497168912587,76.892573617786,150.008535881412,74.987841374176,94.286108488214,50.1798642006156,64.5075849974263,18.4711897605911,52.3211203778752,38.6130340568799,56.3105600756408,46.0765187112432,24.4414473240759,48.6431255085464,58.1262344397452,121.004067134723,36.5638444725197,40.0029661714243,41.9544762446464,92.3820533332933,48.3739508965941,73.6653891637886,77.397624486336,97.0137640271309,22.8502072508813,56.9209301305136,44.867536661807,55.4565203041764,63.9508673218875,64.4266508066008,79.2261225170582,107.876572615623,84.9677956649014,55.5871479367785,76.72414483681,55.5097070395145,54.1755198556332,57.0796734831417,80.4932100989715,90.9050750673006,98.1138837963726,138.590231071243,163.378501452368,97.849356903688,151.559621770315,208.000176988214,227.235873157034,303.218773920139,253.141282930581,231.774485199162,38.6933505357994,30.0481468147511,244.840318190994,141.481053164996,40.9513441027649,62.7039014023184,51.031514683549,73.2111194382733,87.6169492748789,108.048155631934,101.074690108981,89.2668334604139,124.159593147333,98.4834536603697,132.575579241002,86.2866632308053,84.5099775010054,89.0161491447021,49.8826579506605,66.7211313640816,107.072348889426,89.402932924093,127.814689043465,92.7195538950011,168.778317584643,170.48972091644,167.360643878906,139.438795231635,227.082712348756,29.0310483946004,21.0318124771127,22.0364870137157,27.5889765088364,40.7589399981584,56.5269390954752,96.9535983209232,85.4452645104436,87.0359679806218,130.829067939893,117.596539463247,139.480839882209,164.42884954357,153.025993734191,174.644554733539,612.456825402294,49.646749883867,79.6898734801507,88.7766798604234,93.6414090671123,263.487342955976,411.577455091918,392.804033137749,392.984414256734,372.725072678888,482.669584726213,657.911208583688,593.000227727485,630.380597298227,21.1107797514981,16.3171705145613,116.056368432493,91.8869365194759,51.3761887960934,42.665053919562,15.7377547561608,169.912934008543,58.6845288114237,52.3187917357496,48.9011112853454,16.4888470587261,52.580487083445,48.4060867648903,11.7395103485719,40.0390525338497,60.8743178037646,39.2012006034605,60.750356469139,94.7309011509798,35.346470179726,66.9778699268494,142.03729802376,48.0705659586863,66.5111825322452,63.3713067979818,86.5234546140664,126.970716100842,143.427702708363,106.151849007432,99.4627685693372,92.5987700751941,145.477679833498,150.577893142353,29.2778060948258,42.6744792854205,42.9470830158745,38.7950033407182,36.5320881303084,30.8578054451582,46.4028238097981,13.3964577610424,110.295702789944,150.612602384176,35.2845436887939,58.5346197942254,22.282090884035,38.1780814795227,20.6514155125426,26.754966658445,126.211202260725,59.5215219453736,31.7819838284006,118.259675342926,123.339555228228,41.2526920840273,32.669920425325,45.7556346413045,318.029642518503,319.369214202588,302.381542684079,77.3283200592242,49.8229189890288,49.8132694460779,46.9823232574836,46.2085134191976,62.0149681039144,35.8739161383623,57.1135379062071,81.9296098410013,65.06671659248,532.487791315495,2.25477175473676,63.395015522647,50.6302980798719,41.2236519289381,27.8985218711899,46.2939783844732,14.9043693080108,19.9212708811244,14.0511521530453,10.6297013163443,21.6022504693399,10.7443781013581,33.0442100922968,32.6620843784151,29.7518684619151,27.0330310457897,34.5705557319401,11.7791540529569,12.5536098098391,16.0536655417555,10.05929847846,9.67931377313669,10.0381617161945,9.42876048075229,5.72696820689688,158.257807763418,44.8411625815611,113.398314754377,80.9203850874858,42.8880898751463,94.0289202010422,83.7002922901401,54.8783050442409,65.2043735245972,33.3203587144069,28.540164663445,33.8008352929244,26.8090964456153,42.4751162257798,46.8344216381614,30.3760125104313,31.9728054289197,43.5016712624836,45.0451471224083,23.2483658588556,49.4790843017279,39.2687293234509,45.7040628088393,30.6035217436854,47.2477816716536,102.233494788743,100.751142989819,107.82885442285,100.068095858464,106.461305953901,111.666794100557,97.4808092761476,96.0377286073039,97.6402972245426,107.166080538692,106.729464195212,97.419156334171,133.927917761075,126.591071315582,102.517906463239,103.645870797053,101.335380727611,115.405054806069,115.189881628365,112.02974084858,119.269038313048,116.802951878402,107.013641710539,118.401019319783,120.533178414161,101.45961684683,101.489298706083,113.103894065755,77.5484576144188,50.711547321403,110.649650794678,71.1223188899867,64.2728795751314,69.2657056035279,110.832825426561
|short_description=p1@Vegfa
}}

Latest revision as of 13:20, 26 September 2015

Short description:p1@Vegfa
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Vegfa_5end
Coexpression cluster:MCL_coexpression_mm9:3102
Association with transcript: 0bp_to_ENSMUST00000071648, ENSMUST00000074629, ENSMUST00000113518, ENSMUST00000142351, ENSMUST00000164714, ENSMUST00000167860, NM_001025250, NM_001025257, NM_009505, uc008crn.2, uc008cro.2, uc008crp.2, uc008crr.2_5end
EntrezGene:Vegfa
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Vegfa

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G733.63
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5176.58
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6147.87
CD326+ enterocyte, pool1.CNhs13542.11848-124I3320.01
CD326+ enterocyte, pool2.CNhs13197.11849-124I4322.58
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I742.47
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I846.96
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.20
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7147.55
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2154.95
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E661.30
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F132.39
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.37
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.84
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A17.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A37.09
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.74
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.65
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.12
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A3131.65
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H251.73
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I944.14
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D125.60
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D225.69
GP2+ M cell, pool1.CNhs13228.11845-124H9100.49
GP2+ M cell, pool2.CNhs13231.11846-124I173.66
GP2+ M cell, pool3.CNhs13240.11847-124I266.58
Ileum epithelium, pool1.CNhs13199.10252-104B945.04
Ileum epithelium, pool2.CNhs13232.10253-104C138.06
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C816.19
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I346.36
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G632.60
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F540.73
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F627.26
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F753.70
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G839.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H128.91
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H336.65
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G971.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H271.72
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H461.17
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D845.95
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D942.88
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B3103.52
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B746.16
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C231.40
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B89.23
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C313.03
Mouse Astrocytes, donor2.CNhs12078.11552-120C439.34
Mouse Astrocytes, donor3.CNhs12107.11633-122C450.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A211.58
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I914.51
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A111.09
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C184.90
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E165.62
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C550.54
Mouse Granule cells, donor1.CNhs12131.11713-123C313.76
Mouse Granule cells, donor2.CNhs12357.11731-123E313.75
Mouse Granule cells, donor3.CNhs12108.11636-122C718.38
Mouse Meningeal cells, donor1.CNhs12132.11716-123C625.75
Mouse Meningeal cells, donor3.CNhs12109.11639-122D113.34
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C779.64
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E757.35
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D271.76
Mouse Microglia, donor1.CNhs12629.11718-123C826.96
Mouse Microglia, donor2.CNhs12634.11736-123E815.37
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D519.18
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F514.85
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D914.30
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F122.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D517.89
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D213.23
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F212.75
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D625.74
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D323.12
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F331.79
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D729.80
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D420.18
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F417.57
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D820.32
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E439.64
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E532.08
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I635.75
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D613.85
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F613.81
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E113.42
Mouse Schwann, donor1.CNhs12507.11728-123D928.40
Mouse Schwann, donor2.CNhs12573.11746-123F922.29
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3158.56
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F794.65
Mouse hepatocyte, donor1.CNhs13078.11714-123C4475.98
Mouse hepatocyte, donor3.CNhs12615.11637-122C8166.23
Mouse hepatocyte, donor6.CNhs13090.11822-124F4202.73
Mouse hepatocyte, donor8.CNhs13091.11824-124F6169.80
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A794.66
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I734.94
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E321.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I830.39
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G616.90
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H139.78
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I820.38
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G1148.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G2142.13
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G3144.58
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B697.17
accessory axillary lymph node, adult.CNhs10475.1063-29H951.27
adrenal gland, adult.CNhs10508.49-24D7315.14
adrenal gland, embryo E14.CNhs11038.406-44C562.98
adrenal gland, embryo E16.CNhs11004.1254-43D697.12
adrenal gland, embryo E17.CNhs11043.1263-45I1115.77
adrenal gland, embryo E18.CNhs11026.1262-18F5151.33
adrenal gland, neonate N00.CNhs11191.1311-23C186.66
adrenal gland, neonate N25.CNhs11223.1377-27I3206.60
amnion, adult pregnant day17.5.CNhs10488.583-22A8117.91
aorta, adult.CNhs10498.46-23H1278.06
bone (os femoris), adult.CNhs10483.56-12G243.35
bone (os femoris), neonate N02.CNhs11227.1985-43F556.46
bone (os femoris), neonate N16.CNhs11225.1525-43A683.04
bone (os femoris), neonate N20.CNhs11195.1350-25C365.46
cecum, adult.CNhs10467.37-13H467.10
cerebellum, adult.CNhs10494.15-8B247.72
cerebellum, neonate N30.CNhs11135.1395-42I246.50
colon, adult.CNhs10468.36-18H776.89
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C7150.01
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D174.99
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D494.29
corpora quadrigemina, adult.CNhs10501.16-22A450.18
corpus striatum, adult.CNhs10487.19-21D864.51
corpus striatum, neonate N00.CNhs11226.630-43F118.47
cortex, adult.CNhs10473.12-14D552.32
cortex, neonate N30.CNhs11107.1392-42F238.61
diencephalon, adult.CNhs10482.20-12F256.31
diencephalon, neonate N30.CNhs11201.1388-42B246.08
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B124.44
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A248.64
epididymis, adult.CNhs10490.58-23B258.13
eyeball, adult.CNhs10484.31-12G4121.00
eyeball, embryo E12.CNhs11016.345-16C636.56
eyeball, embryo E14.CNhs10521.399-16E240.00
eyeball, embryo E15.CNhs10593.426-16C941.95
eyeball, embryo E17.CNhs11023.1261-18D492.38
eyeball, neonate N00.CNhs11207.633-15C648.37
eyeball, neonate N01.CNhs11140.1532-43E773.67
eyeball, neonate N02.CNhs11205.1551-44G877.40
eyeball, neonate N16.CNhs11188.777-19A297.01
forelimb, embryo E11.CNhs10596.335-25E222.85
forelimb, embryo E12.CNhs10600.359-14H256.92
forelimb, embryo E13.CNhs10589.384-1E244.87
forelimb, embryo E14.CNhs10577.413-26A855.46
forelimb, embryo E15.CNhs11007.437-20E763.95
forelimb, embryo E17.CNhs10598.1517-43C464.43
forelimb, embryo E18.CNhs11008.1520-43B579.23
gonad, embryo E13.CNhs11044.1564-45I6107.88
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C884.97
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D255.59
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D576.72
heart, embryo E11.CNhs10586.331-24E955.51
heart, embryo E12.CNhs11015.353-12F554.18
heart, embryo E13.CNhs11013.376-3I957.08
heart, embryo E14.CNhs10597.403-26D480.49
heart, embryo E15.CNhs11017.431-16C890.91
heart, embryo E16.CNhs11021.457-17C698.11
heart, embryo E17.CNhs11025.479-18E5138.59
heart, embryo E18.CNhs11030.1283-20G3163.38
heart, neonate N00.CNhs11213.639-21E397.85
heart, neonate N03.CNhs11221.1349-25I2151.56
heart, neonate N10.CNhs11118.749-24G1208.00
heart, neonate N16.CNhs11209.782-15G1227.24
heart, neonate N20.CNhs11127.821-26I6303.22
heart, neonate N25.CNhs11196.1351-25D3253.14
heart, neonate N30.CNhs11202.1390-42D2231.77
hippocampus, adult.CNhs10478.13-16E838.69
hippocampus, neonate N00.CNhs11228.627-43G130.05
intestinal mucosa, adult.CNhs10506.860-29I3244.84
intestine, adult.CNhs10496.178-9A3141.48
intestine, embryo E12.CNhs11019.1251-16I540.95
intestine, embryo E13.CNhs11010.381-16D562.70
intestine, embryo E15.CNhs10602.976-16D851.03
intestine, embryo E16.CNhs10585.463-22H473.21
intestine, embryo E17.CNhs10582.482-18D387.62
intestine, embryo E18.CNhs10526.1289-20F7108.05
intestine, neonate N00.CNhs11126.644-26D1101.07
intestine, neonate N01.CNhs11192.1322-23E989.27
intestine, neonate N06.CNhs11102.688-20B8124.16
intestine, neonate N07.CNhs11095.720-20F298.48
intestine, neonate N10.CNhs11098.755-23A5132.58
intestine, neonate N20.CNhs11187.827-18D186.29
intestine, neonate N25.CNhs11121.1352-25E384.51
intestine, neonate N30.CNhs11131.1384-42G189.02
kidney, embryo E14.CNhs10606.411-4I949.88
kidney, embryo E15.CNhs10997.434-16F866.72
kidney, embryo E16.CNhs10584.464-22A5107.07
kidney, embryo E17.CNhs11028.483-18I289.40
kidney, embryo E18.CNhs11001.1288-20C7127.81
kidney, neonate N00.CNhs11214.646-21G792.72
kidney, neonate N10.CNhs11206.758-6D5168.78
kidney, neonate N20.CNhs11113.832-19I1170.49
kidney, neonate N25.CNhs11122.1353-25F3167.36
kidney, neonate N30.CNhs11203.1385-42H1139.44
liver, adult pregnant day01.CNhs10466.508-5B2227.08
liver, embryo E12.CNhs10601.355-15F829.03
liver, embryo E13.CNhs10524.378-3H621.03
liver, embryo E14.CNhs10594.409-16E122.04
liver, embryo E15.CNhs10520.433-16D727.59
liver, embryo E16.CNhs10523.462-17F540.76
liver, embryo E17.CNhs10510.481-18A356.53
liver, embryo E18.CNhs10579.499-43G496.95
liver, neonate N00.CNhs11117.641-24F485.45
liver, neonate N03.CNhs11123.1345-25G287.04
liver, neonate N06.CNhs11101.684-20A8130.83
liver, neonate N07.CNhs11103.716-20H2117.60
liver, neonate N10.CNhs11115.751-24B9139.48
liver, neonate N20.CNhs11220.823-25A3164.43
liver, neonate N25.CNhs11198.1368-26H1153.03
liver, neonate N30.CNhs11106.1382-42D1174.64
lung, adult.CNhs10474.28-22B1612.46
lung, embryo E12.CNhs10522.354-16G249.65
lung, embryo E14.CNhs10604.404-26F879.69
lung, embryo E15.CNhs11020.432-17C588.78
lung, embryo E16.CNhs10998.458-17B693.64
lung, embryo E17.CNhs10605.480-44A6263.49
lung, embryo E18.CNhs10583.1287-20I6411.58
lung, neonate N00.CNhs11224.640-42C6392.80
lung, neonate N06.CNhs11212.683-20E5392.98
lung, neonate N07.CNhs11111.715-19A3372.73
lung, neonate N10.CNhs11219.750-23E6482.67
lung, neonate N20.CNhs11109.822-18A4657.91
lung, neonate N25.CNhs11119.1359-25C7593.00
lung, neonate N30.CNhs11133.1394-42H2630.38
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A121.11
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A116.32
mammary gland, adult lactating day02.CNhs10480.595-22B6116.06
mammary gland, adult pregnant day19.CNhs10476.588-5H291.89
medulla oblongata, adult.CNhs10477.17-12C251.38
medulla oblongata, neonate N30.CNhs11200.1396-42A342.67
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C715.74
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2169.91
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E158.68
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E252.32
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E348.90
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D716.49
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D852.58
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D948.41
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D411.74
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D540.04
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D660.87
olfactory brain, adult.CNhs10489.18-22I939.20
ovary, adult.CNhs10507.91-2I760.75
ovary, embryo E18.CNhs11040.505-44H794.73
ovary, neonate N00.CNhs11217.1299-22I435.35
oviduct, adult pregnant day01.CNhs10500.988-6G666.98
pancreas, adult.CNhs10486.34-16E4142.04
pancreas, embryo E14.CNhs11012.405-44F448.07
pancreas, embryo E15.CNhs11042.1556-45F266.51
pancreas, embryo E16.CNhs11003.460-26E563.37
pancreas, embryo E17.CNhs10599.1558-45G386.52
pancreas, embryo E18.CNhs10580.1535-43I7126.97
pancreas, neonate N00.CNhs11105.645-26G9143.43
pancreas, neonate N01.CNhs11138.1531-43D7106.15
pancreas, neonate N02.CNhs11139.1539-43D899.46
pancreas, neonate N16.CNhs11136.787-43B692.60
pancreas, neonate N25.CNhs11094.1555-45E2145.48
pancreas, neonate N30.CNhs11182.1548-44H5150.58
pituitary gland, adult.CNhs10493.21-1G829.28
pituitary gland, embryo E12.CNhs11018.346-16E642.67
pituitary gland, embryo E13.CNhs11009.370-44C742.95
pituitary gland, embryo E14.CNhs11037.398-44A538.80
pituitary gland, embryo E15.CNhs10592.427-16B936.53
pituitary gland, embryo E16.CNhs11036.449-43F630.86
pituitary gland, embryo E17.CNhs11039.1265-44F546.40
pituitary gland, neonate N00.CNhs11190.1308-22E913.40
placenta, adult pregnant day10.CNhs10472.539-13I7110.30
placenta, adult pregnant day17.CNhs10464.577-18G3150.61
prostate, adult.CNhs10470.859-1F835.28
skin, adult.CNhs10492.30-1C358.53
skin, neonate N00.CNhs11124.650-25G422.28
skin, neonate N03.CNhs11215.662-22H338.18
skin, neonate N06.CNhs11097.693-20I520.65
skin, neonate N10.CNhs11108.762-6C426.75
small intestine, neonate N16.CNhs11114.790-21I1126.21
spinal cord, adult.CNhs10505.24-13C959.52
spleen, adult.CNhs10465.25-2G231.78
spleen, embryo E16.CNhs11035.461-43C1118.26
spleen, embryo E18.CNhs11011.1271-21F2123.34
spleen, neonate N10.CNhs11116.752-24D141.25
spleen, neonate N20.CNhs11112.824-19H132.67
spleen, neonate N25.CNhs11099.1354-25G345.76
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C6318.03
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C9319.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D3302.38
stomach, adult.CNhs10503.33-1H677.33
stomach, embryo E12.CNhs10588.356-43E349.82
stomach, embryo E15.CNhs10603.1252-16G849.81
stomach, embryo E16.CNhs11022.459-17D446.98
stomach, embryo E17.CNhs11006.1035-18D546.21
stomach, embryo E18.CNhs10999.1286-20C662.01
stomach, neonate N03.CNhs11193.1340-24B835.87
stomach, neonate N07.CNhs11210.718-18A957.11
stomach, neonate N25.CNhs11104.1355-25E481.93
stomach, neonate N30.CNhs11134.1386-42I165.07
submandibular gland, adult.CNhs10469.59-29C1532.49
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F563.40
testis, embryo E15.CNhs11034.443-27C550.63
testis, embryo E16.CNhs11033.470-26G541.22
testis, embryo E17.CNhs11029.486-18I527.90
testis, embryo E18.CNhs11027.503-18G546.29
testis, neonate N00.CNhs11189.1300-22B714.90
testis, neonate N07.CNhs11222.726-26I419.92
testis, neonate N10.CNhs11204.763-44D914.05
testis, neonate N20.CNhs11110.839-18H310.63
testis, neonate N30.CNhs11130.1391-42E221.60
thymus, adult.CNhs10471.38-12B510.74
thymus, embryo E14.CNhs11041.402-44I433.04
thymus, embryo E15.CNhs11005.430-45I232.66
thymus, embryo E16.CNhs11002.456-26C529.75
thymus, embryo E17.CNhs10581.478-18C127.03
thymus, embryo E18.CNhs10595.1273-19G434.57
thymus, neonate N02.CNhs11181.1541-43F811.78
thymus, neonate N03.CNhs11137.2104-43C712.55
thymus, neonate N06.CNhs11197.681-26C416.05
thymus, neonate N07.CNhs11211.713-19D310.06
thymus, neonate N10.CNhs11194.748-24E49.68
thymus, neonate N20.CNhs11186.820-7A210.04
thymus, neonate N25.CNhs11125.1362-25G79.43
thymus, neonate N30.CNhs11132.1393-42G25.73
tongue, adult.CNhs10499.32-1B4158.26
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H344.84
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F7113.40
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G580.92
urinary bladder, adult.CNhs10481.879-12E442.89
uterus, adult pregnant day19.CNhs10497.590-15F594.03
uterus, adult.CNhs10509.92-27E583.70
vagina, adult.CNhs10502.89-27D554.88
vesicular gland, adult.CNhs10491.51-27F865.20
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A133.32
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A228.54
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A333.80
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D726.81
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A442.48
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A546.83
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A630.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A731.97
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A843.50
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A945.05
whole body, embryo E11.CNhs11014.324-5I823.25
whole body, embryo E12.CNhs10587.857-27C949.48
whole body, embryo E13.CNhs10512.372-23H239.27
whole body, embryo E14.5.CNhs10578.420-27D245.70
whole body, embryo E14.CNhs10519.395-14B130.60
whole body, embryo E16.CNhs10514.453-14F247.25
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G5102.23
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G5100.75
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G5107.83
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G5100.07
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G5106.46
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G5111.67
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G597.48
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G596.04
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G597.64
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G5107.17
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G5106.73
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G597.42
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G5133.93
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G5126.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G5102.52
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G5103.65
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G5101.34
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5115.41
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G5115.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G5112.03
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G5119.27
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G5116.80
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G5107.01
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G5118.40
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G5120.53
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G5101.46
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G5101.49
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G5113.10
whole body, embryo E17.5.CNhs10513.490-9F977.55
whole body, embryo E17.CNhs10517.475-3I550.71
whole body, embryo E18.CNhs10516.493-3B3110.65
whole body, neonate N00.CNhs10525.657-19C271.12
whole body, neonate N01.CNhs10576.659-23C664.27
whole body, neonate N06.CNhs10515.692-21D169.27
whole body, neonate N10.CNhs10518.761-6B4110.83





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
trunk region element1.12e-1379
subdivision of trunk1.01e-1166
trunk1.34e-1190
thoracic cavity element3.08e-0817
thoracic segment organ3.08e-0817
thoracic cavity3.08e-0817
thoracic segment of trunk3.08e-0817
respiratory primordium3.08e-0817
endoderm of foregut3.08e-0817
lung4.82e-0714
respiratory tube4.82e-0714
respiration organ4.82e-0714
pair of lungs4.82e-0714
lung primordium4.82e-0714
lung bud4.82e-0714
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