FFCP PHASE1:Hg19::chr5:168727902..168727913,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6586 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11087 | |||
|TSSclassifier=strong | |||
|UniProt=O75094 | |||
|association_with_transcript=-116bp_to_ENST00000332966_5end | |||
|cluster_id=chr5:168727902..168727913,- | |||
|coexpression_cluster_id=C859 | |||
|description=CAGE_peak_9_at_SLIT3_5end | |||
|id=chr5:168727902..168727913,- | |||
|ontology_enrichment_celltype=CL:0000057!2.12e-10!75;CL:0000136!1.30e-07!15;CL:0000055!5.39e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:1000306;1.27e-13;4!CL:0002547;1.27e-13;4!CL:0002580;1.31e-11;3!CL:0002579;6.88e-11;3!CL:0002334;5.42e-10;12!CL:0000136;2.54e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:1000306,1.16e-13,4;CL:0002547,1.16e-13,4;CL:0002580,1.15e-11,3;CL:0000057,5.45e-11,76;CL:0002579,7.66e-11,3;CL:0002334,5.38e-10,12;CL:0000136,4.93e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!6.99e-09!27;UBERON:0000948!1.80e-08!24;UBERON:0005498!1.80e-08!24;UBERON:0004140!1.80e-08!24;UBERON:0009881!1.80e-08!24;UBERON:0004141!1.80e-08!24;UBERON:0003084!1.80e-08!24;UBERON:0007005!1.80e-08!24;UBERON:0004139!1.80e-08!24;UBERON:0004291!1.80e-08!24;UBERON:0007023!1.03e-07!115;UBERON:0000475!1.51e-07!365;UBERON:0004457!7.06e-07!12;UBERON:0000042!7.06e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;3.44e-17;9!UBERON:0000042;3.44e-17;9!UBERON:0004797;1.27e-13;4!UBERON:0000415;1.27e-13;4!UBERON:0007240;1.27e-13;4!UBERON:0005742;1.27e-13;4!UBERON:0005734;1.27e-13;4!UBERON:0004664;1.27e-13;4!UBERON:0004663;1.27e-13;4!UBERON:0003688;1.41e-13;6!UBERON:0002358;1.41e-13;6!UBERON:0003684;1.41e-13;6!UBERON:0001178;1.41e-13;6!UBERON:0000310;2.45e-08;10!UBERON:0001443;1.52e-07;11!UBERON:0004089;3.60e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,1.16e-13,4;UBERON:0007240,1.16e-13,4;UBERON:0005742,1.16e-13,4;UBERON:0005734,1.16e-13,4;UBERON:0004664,1.16e-13,4;UBERON:0004663,1.16e-13,4;UBERON:0003688,2.62e-13,6;UBERON:0002358,2.62e-13,6;UBERON:0003684,2.62e-13,6;UBERON:0001178,2.62e-13,6;UBERON:0004457,1.59e-12,12;UBERON:0000042,1.59e-12,12;UBERON:0000310,1.91e-08,10;UBERON:0004797,8.23e-08,7;UBERON:0001443,1.22e-07,11;UBERON:0004089,4.11e-07,2 | |||
|phase1_expression=1.63510541343501,0.856402095563933,1.26858963686374,1.0007329835313,0.446961094427288,2.61701557230111,0,1.26343974685366,2.35067065379855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.547497700291537,0.376627918784408,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.895037932904712,0,0.50133791063589,0.144846518960824,0,0,0.0945348171640679,0.221729397462564,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.47880366186723,1.51956613997496,3.31022952033047,3.44203944898576,1.41867352879343,2.80338800071154,0,0.24666754841716,0.622422070799533,0.134710672069688,0,0,0,0.234321431833797,0,0,0,0,0,0.280901613404497,0,0,0,0,0,0,0,0.168336113954066,0.250237039743928,0,0,0,0.600952235626387,0,1.07633781413317,2.56268866582281,1.90738711043606,0.300091096084402,0.309157587715317,1.03056216018252,0.18611685633159,2.36286865137773,0.292311015483596,0.252433774244115,2.66944706062668,0.80823028409406,0.355009592516614,0,0.169560592310488,0,0,0,0,0,0,0,0,0,1.56449532329816,1.92972281457866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0.219500570817251,0,0,0.0925884451585296,0.651616610620649,0,0,0.695582429850461,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0.285955987316295,1.62786481617433,0,0,0,0,7.83742380354924,5.22920075160176,4.49878460319257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.356857977594324,0,0.234282829985426,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0.303127571446259,0,0.907170879989041,5.45837177201309,3.6830873589135,5.3325417942284,3.33161788064823,3.07024349440022,1.44768529029247,0,0,0.532685175939381,0.328508624055237,0,0.581051892299796,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0.656029291399411,0,0.206082023295445,0.457847324091717,0.330037999682352,0.574265537996172,0,0,0,0,0,0,0,0,0,0.445160178233687,0.165284915360978,0.384380134730212,0.127612712494584,1.2138933702666,0,0.94443704049192,0.6970372701606,0.616067160352178,0,0,1.11194531462352,0.286249773483982,0,0,0,0,0,1.59101623962968,0,0,0,0,0.808729926293264,3.17020642346017,0.421258456238981,0,0,0,0,0,1.13008116620243,0.551365343546124,1.32687795048244,0.438450885253763,0,0,0,0.30982349809975,0.281695602532241,0,0,0.35667105148125,0,5.2776908824416,1.64647446479951,0.379473173765715,1.04980416073495,0,0.670302275535787,0,0.282431402330337,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0,0,0,0,0,1.90012867315194,0.398495976502139,0,0,0,0,0.622079175323615,0,0,0,1.1837208676432,0,0,0,0,0,0,0.174919999992391,1.44999915086959,0,0,0,0,0,0,0,0.241192877250816,0,0.995213339381022,0.591095237907095,0.219385397153973,0,0.697118721393016,0.769502585037971,0.113942055847001,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.695052375913368,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0.484945082442097,0,0.677942222341597,0,0,0.0633107959558787,0,0,1.92107695265417,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0.136905378891993,0,0.429765441419957,0,0.837847203816763,0.229160424011684,0.717873024576814,0,0.429226048136571,0.446342914883745,0.201550417460179,0,1.16495949527454,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.121499113316049,0,0.157611414598396,0.786818822024972,0,0,0.191915197319445,0,0.662091970365432,0,1.08599920350743,0.864221491201268,0,0,0,0.340776043570843,0,0,0,0.129282956361551,0.13223260174269,0,0,0.106787412567695,0.314408610199332,0.828478110694391,0,0,0,0,0,0.7520696820681,0.306345576763462,0,0.942324577501406,0,0,0,0,0.110929051536852,0,0.276697269872462,0.624902039810533,0,0,0.235265819698172,0,0,0.447764408660622,0.233713309847224,0,0.189403005275089,1.0062716070103,0,0.228840068396924,0.151230923763239,0.15543720058278,0,0,0,0.155262956876259,0,0,0,1.20206087197775,3.80805212168795,0,0,0.429642228169954,0,0,0,0.686791410365586,0.673498977531838,0,0.385239660814607,1.50109113962448,0.782982875895635,0.680117776536817,0.463044948647668,0,0,3.70561736593167,0,0.176689145945881,0.771656153083659,0.675769762612291,0,0,0,0,0,0,0,0,0.737318726261158,0,0,0,0,0,0,0.139879507719444,0,0,0.323474434190045,0,0.982886743728125,0,0,0,0,2.86203915588077,0,0,1.05802783107205,0,0.128458450192919,0,0,0.205116364240755,0,0,0.161475645631851,0,0,0,0,0,0,0,2.3869946653953,0.82731361184183,0.40341013740704,0,0,0.327543835020193,0,0.135075169236789,0,0,0.0634158101939068,0,1.64477330057155,1.98484471355718,0,0.255524855279191,0,0,0,0.227662191351298,0.266107110487916,0,0,0.0679697329768317,0.131545547125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| |||
|short_description=p9@SLIT3 | |||
}} |
Latest revision as of 20:29, 16 September 2015
Short description: | p9@SLIT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SLIT3_5end |
Coexpression cluster: | C859_Fibroblast_Synoviocyte_Preadipocyte_mesothelioma_tenocyte_Mesothelial_Smooth |
Association with transcript: | -116bp_to_ENST00000332966_5end |
EntrezGene: | SLIT3 |
HGNC: | 11087 |
UniProt: | O75094 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 1.16e-13 | 4 |
fibroblast of the aortic adventitia | 1.16e-13 | 4 |
preadipocyte of the breast | 1.15e-11 | 3 |
fibroblast | 5.45e-11 | 76 |
omentum preadipocyte | 7.66e-11 | 3 |
preadipocyte | 5.38e-10 | 12 |
fat cell | 4.93e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
artery wall | 1.16e-13 | 4 |
tunica adventitia of artery | 1.16e-13 | 4 |
adventitia | 1.16e-13 | 4 |
tunica adventitia of blood vessel | 1.16e-13 | 4 |
aorta tunica adventitia | 1.16e-13 | 4 |
aorta wall | 1.16e-13 | 4 |
omentum | 2.62e-13 | 6 |
peritoneum | 2.62e-13 | 6 |
abdominal cavity | 2.62e-13 | 6 |
visceral peritoneum | 2.62e-13 | 6 |
cavity lining | 1.59e-12 | 12 |
serous membrane | 1.59e-12 | 12 |
breast | 1.91e-08 | 10 |
blood vessel layer | 8.23e-08 | 7 |
chest | 1.22e-07 | 11 |
midface | 4.11e-07 | 2 |