FFCP PHASE1:Mm9::chr18:33098419..33098426,+: Difference between revisions
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{{FFCP|EntrezGene=12326|HGNC=|MCL_coexpression_id=30|UniProt=Q8BGR3|association_with_transcript=-268bp_to_ENSMUST00000042868,NM_009793,uc008ejq.2_5end|description=CAGE_peak_15_at_Camk4_5end|id=chr18:33098419..33098426,+|ontology_enrichment_celltype=CL:0002614!8.16e-08!3|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007811!6.99e-19!86;UBERON:0000153!1.08e-16!94;UBERON:0002791!5.32e-16!29;UBERON:0003528!5.32e-16!29;UBERON:0001893!5.32e-16!29;UBERON:0002616!1.38e-15!49;UBERON:0000955!3.55e-15!50;UBERON:0006238!3.55e-15!50;UBERON:0002020!4.41e-15!34;UBERON:0001049!2.18e-14!52;UBERON:0005068!2.18e-14!52;UBERON:0006241!2.18e-14!52;UBERON:0007135!2.18e-14!52;UBERON:0000064!2.51e-14!99;UBERON:0002021!2.82e-12!10;UBERON:0000411!2.82e-12!10;UBERON:0001950!2.82e-12!10;UBERON:0000033!2.85e-12!63;UBERON:0002780!5.54e-11!39;UBERON:0001890!5.54e-11!39;UBERON:0006240!5.54e-11!39;UBERON:0003080!1.28e-10!40;UBERON:0002346!2.57e-10!71;UBERON:0003075!2.57e-10!71;UBERON:0007284!2.57e-10!71;UBERON:0000956!2.99e-10!21;UBERON:0001869!2.99e-10!21;UBERON:0000203!2.99e-10!21;UBERON:0001017!5.03e-10!73;UBERON:0005743!5.03e-10!73;UBERON:0000073!1.26e-09!75;UBERON:0001016!1.26e-09!75;UBERON:0002298!2.38e-09!6;UBERON:0003056!3.54e-09!49;UBERON:0002619!1.28e-08!17;UBERON:0000063!1.29e-08!35;UBERON:0002038!8.16e-08!3;UBERON:0002308!8.16e-08!3;UBERON:0009663!8.16e-08!3;UBERON:0009661!8.16e-08!3;UBERON:0006331!8.16e-08!3;UBERON:0000125!8.16e-08!3;UBERON:0002420!3.17e-07!8;UBERON:0007245!3.17e-07!8;UBERON:0010009!3.17e-07!8;UBERON:0010011!3.17e-07!8;UBERON:0000454!3.17e-07!8;UBERON:0000477!7.73e-07!154|ontology_enrichment_uberon_v019_2=UBERON:0002037,6.55e-23,4;UBERON:0002680,6.55e-23,4;UBERON:0001895,6.55e-23,4;UBERON:0010092,6.55e-23,4;UBERON:0006215,6.55e-23,4;UBERON:0004733,1.13e-15,6;UBERON:0004732,1.13e-15,6;UBERON:0002028,1.13e-15,6;UBERON:0007277,1.13e-15,6;UBERON:0002021,1.14e-09,10;UBERON:0000411,1.14e-09,10;UBERON:0001950,1.14e-09,10;UBERON:0002616,2.15e-08,46;UBERON:0003076,2.25e-08,12;UBERON:0003057,2.25e-08,12;UBERON:0000955,3.12e-08,47;UBERON:0006238,3.12e-08,47;UBERON:0001049,1.63e-07,52;UBERON:0005068,1.63e-07,52;UBERON:0006241,1.63e-07,52;UBERON:0007135,1.63e-07,52;UBERON:0000073,2.91e-07,54|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0,0,0,0.171200729931206,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0.220868540951614,0,0,0,0,0.255374676170375,0,0,0,0.52091337055676,0.279182999001381,0.56276261003168,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.85561594023094,3.97948742945565,0,0,0,0,0,0,0.125654352112864,0.347648640384553,0.255715457330331,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0.198681354781265,0,0,0.201932899896295,0,0.302478555410522,0.38983152295901,0.288635524920988,0.233753804363138,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0.572895513439397,1.03111909406213,0.685082519770642,2.2661816921691,0,0,0,0.51776031175182,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0.191288332068843,0,0|short_description=p15@Camk4}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12326 | |||
|HGNC= | |||
|MCL_coexpression_id=30 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BGR3 | |||
|association_with_transcript=-268bp_to_ENSMUST00000042868,NM_009793,uc008ejq.2_5end | |||
|cluster_id=chr18:33098419..33098426,+ | |||
|description=CAGE_peak_15_at_Camk4_5end | |||
|id=chr18:33098419..33098426,+ | |||
|ontology_enrichment_celltype=CL:0002614!8.16e-08!3 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007811!6.99e-19!86;UBERON:0000153!1.08e-16!94;UBERON:0002791!5.32e-16!29;UBERON:0003528!5.32e-16!29;UBERON:0001893!5.32e-16!29;UBERON:0002616!1.38e-15!49;UBERON:0000955!3.55e-15!50;UBERON:0006238!3.55e-15!50;UBERON:0002020!4.41e-15!34;UBERON:0001049!2.18e-14!52;UBERON:0005068!2.18e-14!52;UBERON:0006241!2.18e-14!52;UBERON:0007135!2.18e-14!52;UBERON:0000064!2.51e-14!99;UBERON:0002021!2.82e-12!10;UBERON:0000411!2.82e-12!10;UBERON:0001950!2.82e-12!10;UBERON:0000033!2.85e-12!63;UBERON:0002780!5.54e-11!39;UBERON:0001890!5.54e-11!39;UBERON:0006240!5.54e-11!39;UBERON:0003080!1.28e-10!40;UBERON:0002346!2.57e-10!71;UBERON:0003075!2.57e-10!71;UBERON:0007284!2.57e-10!71;UBERON:0000956!2.99e-10!21;UBERON:0001869!2.99e-10!21;UBERON:0000203!2.99e-10!21;UBERON:0001017!5.03e-10!73;UBERON:0005743!5.03e-10!73;UBERON:0000073!1.26e-09!75;UBERON:0001016!1.26e-09!75;UBERON:0002298!2.38e-09!6;UBERON:0003056!3.54e-09!49;UBERON:0002619!1.28e-08!17;UBERON:0000063!1.29e-08!35;UBERON:0002038!8.16e-08!3;UBERON:0002308!8.16e-08!3;UBERON:0009663!8.16e-08!3;UBERON:0009661!8.16e-08!3;UBERON:0006331!8.16e-08!3;UBERON:0000125!8.16e-08!3;UBERON:0002420!3.17e-07!8;UBERON:0007245!3.17e-07!8;UBERON:0010009!3.17e-07!8;UBERON:0010011!3.17e-07!8;UBERON:0000454!3.17e-07!8;UBERON:0000477!7.73e-07!154 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,6.55e-23,4;UBERON:0002680,6.55e-23,4;UBERON:0001895,6.55e-23,4;UBERON:0010092,6.55e-23,4;UBERON:0006215,6.55e-23,4;UBERON:0004733,1.13e-15,6;UBERON:0004732,1.13e-15,6;UBERON:0002028,1.13e-15,6;UBERON:0007277,1.13e-15,6;UBERON:0002021,1.14e-09,10;UBERON:0000411,1.14e-09,10;UBERON:0001950,1.14e-09,10;UBERON:0002616,2.15e-08,46;UBERON:0003076,2.25e-08,12;UBERON:0003057,2.25e-08,12;UBERON:0000955,3.12e-08,47;UBERON:0006238,3.12e-08,47;UBERON:0001049,1.63e-07,52;UBERON:0005068,1.63e-07,52;UBERON:0006241,1.63e-07,52;UBERON:0007135,1.63e-07,52;UBERON:0000073,2.91e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0,0,0,0.171200729931206,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0.220868540951614,0,0,0,0,0.255374676170375,0,0,0,0.52091337055676,0.279182999001381,0.56276261003168,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.85561594023094,3.97948742945565,0,0,0,0,0,0,0.125654352112864,0.347648640384553,0.255715457330331,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0.198681354781265,0,0,0.201932899896295,0,0.302478555410522,0.38983152295901,0.288635524920988,0.233753804363138,0,0,0,0,0,0,0,0,0,0.564751842617067,0.460325236507177,0.572895513439397,1.03111909406213,0.685082519770642,2.2661816921691,0,0,0,0.51776031175182,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0.191288332068843,0,0 | |||
|short_description=p15@Camk4 | |||
}} |
Latest revision as of 03:44, 27 September 2015
Short description: | p15@Camk4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_15_at_Camk4_5end |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | -268bp_to_ENSMUST00000042868, NM_009793, uc008ejq.2_5end |
EntrezGene: | Camk4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 6.55e-23 | 4 |
regional part of metencephalon | 6.55e-23 | 4 |
metencephalon | 6.55e-23 | 4 |
future metencephalon | 6.55e-23 | 4 |
rhombic lip | 6.55e-23 | 4 |
segmental subdivision of hindbrain | 1.13e-15 | 6 |
segmental subdivision of nervous system | 1.13e-15 | 6 |
hindbrain | 1.13e-15 | 6 |
presumptive hindbrain | 1.13e-15 | 6 |
occipital lobe | 1.14e-09 | 10 |
visual cortex | 1.14e-09 | 10 |
neocortex | 1.14e-09 | 10 |
regional part of brain | 2.15e-08 | 46 |
posterior neural tube | 2.25e-08 | 12 |
chordal neural plate | 2.25e-08 | 12 |
brain | 3.12e-08 | 47 |
future brain | 3.12e-08 | 47 |
neural tube | 1.63e-07 | 52 |
neural rod | 1.63e-07 | 52 |
future spinal cord | 1.63e-07 | 52 |
neural keel | 1.63e-07 | 52 |
regional part of nervous system | 2.91e-07 | 54 |