FFCP PHASE1:Hg19::chr5:83016808..83016832,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1404 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2380 | |||
|TSSclassifier=strong | |||
|UniProt=P10915 | |||
|association_with_transcript=63bp_to_NM_001884,uc003kin.2_5end | |||
|cluster_id=chr5:83016808..83016832,- | |||
|coexpression_cluster_id=C4525 | |||
|description=CAGE_peak_2_at_HAPLN1_5end | |||
|id=chr5:83016808..83016832,- | |||
|ontology_enrichment_celltype=CL:0000055!1.16e-35!180;CL:0000057!4.19e-17!75;CL:0000359!9.84e-12!32;CL:0002620!5.06e-09!23;CL:0000192!1.19e-08!42;CL:0000514!1.19e-08!42;CL:0000393!7.09e-08!60;CL:0000211!7.09e-08!60;CL:0000187!1.35e-07!54;CL:0000680!2.44e-07!57;CL:0000056!2.44e-07!57;CL:0000355!2.44e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.63e-10;23!CL:0000359;5.06e-10;32!CL:0000062;5.08e-09;9!CL:0000057;2.00e-08;73!CL:0000138;4.48e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.58e-19,76;CL:0000359,5.53e-11,32;CL:0002620,1.53e-10,23;CL:0000062,3.22e-09,11;CL:0000375,3.22e-09,11;CL:0000335,3.22e-09,11;CL:0000034,2.00e-07,441;CL:0000058,4.75e-07,6;CL:0000138,4.75e-07,6;CL:0000192,6.56e-07,43;CL:0000514,6.56e-07,43;CL:0000048,8.46e-07,427 | |||
|ontology_enrichment_development_v019=CL:0000335;3.24e-09;11 | |||
|ontology_enrichment_disease=DOID:17!6.94e-07!5;DOID:450!6.94e-07!5;DOID:66!6.94e-07!5;DOID:423!6.94e-07!5;DOID:0080000!6.94e-07!5;DOID:11722!6.94e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:17;5.91e-09;5!DOID:450;5.91e-09;5!DOID:66;5.91e-09;5!DOID:423;5.91e-09;5!DOID:0080000;5.91e-09;5!DOID:11722;5.91e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,5.97e-09,5;DOID:450,5.97e-09,5;DOID:66,5.97e-09,5;DOID:423,5.97e-09,5;DOID:0080000,5.97e-09,5;DOID:11722,5.97e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0004872!2.90e-10!84;UBERON:0002049!4.86e-09!79;UBERON:0007798!4.86e-09!79;UBERON:0001009!1.35e-08!113;UBERON:0001981!2.58e-08!60;UBERON:0007500!2.58e-08!60;UBERON:0004537!2.58e-08!60;UBERON:0006965!2.58e-08!60;UBERON:0004535!2.94e-08!110;UBERON:0001637!3.30e-08!42;UBERON:0003509!3.30e-08!42;UBERON:0004572!3.30e-08!42;UBERON:0000914!3.79e-08!83;UBERON:0002329!3.79e-08!83;UBERON:0003077!3.79e-08!83;UBERON:0003059!3.79e-08!83;UBERON:0007282!3.79e-08!83;UBERON:0009618!3.79e-08!83;UBERON:0007285!3.79e-08!83;UBERON:0004573!4.86e-07!33;UBERON:0004571!4.86e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;2.47e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,4.77e-09,42;UBERON:0003509,4.77e-09,42;UBERON:0004572,4.77e-09,42;UBERON:0007500,4.98e-09,59;UBERON:0001981,4.98e-09,59;UBERON:0004537,4.98e-09,59;UBERON:0006965,4.98e-09,59;UBERON:0002049,5.50e-09,78;UBERON:0007798,5.50e-09,78;UBERON:0002097,7.24e-09,41;UBERON:0004872,1.01e-08,83;UBERON:0002199,2.45e-07,46;UBERON:0002416,2.45e-07,46;UBERON:0004535,4.01e-07,109;UBERON:0004573,4.89e-07,33;UBERON:0004571,4.89e-07,33;UBERON:0000055,5.77e-07,68;UBERON:0004797,6.74e-07,7 | |||
|phase1_expression=0.726713517082227,2.35510576280081,0,11.0080628188443,0,0,0,0,0,0,0,0,0.263766978228454,1.23766352960047,0.662794751455832,1.34465029290355,0.602694528023977,0,0,2.95490539384291,3.4680117511523,0.626909442956176,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,1.10799081706375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.60305222636709,26.7464972764579,7.01873074890245,12.31195411167,23.0632924644819,61.8026285284348,2.17430079477356,1.10864698731282,0.614843499851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.8425414881566,8.61087479319142,1.19168262731897,5.44989579422746,0.354668382198357,13.4562624034154,25.6197589751292,24.666754841716,0.622422070799533,1.48181739276657,0.326923806226917,1.05950199351452,1.15235184896,0,0,0,0.149448680551801,0,0,0,0,0.859840221182376,0,5.94001428641027,2.47266929278557,0,0,1.17835279767846,0.375355559615893,0,7.02364193409341,28.5033650093088,2.10333282469236,2.38207584636044,87.3627525804758,30.7522639898737,7.41761654058466,50.715395238264,23.1868190786488,12.3667459221902,9.1197259602479,7.76371128309825,11.4001296038602,23.9812085531909,21.8158259782249,0.484938170456436,16.3304412557643,6.85114267947954,1.3564847384839,0,0,0,0.487894824518382,1.32529768321485,15.5699883445155,4.5610864206763,5.04641701751257,0,3.12899064659632,7.71889125831462,0,13.9310378409594,20.934504968418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,4.28919525746314,0,0,0,0,0,0,0,0,9.86233031580902,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.22001485746285,2.97324946242889,0,0,0,0,0,2.83698264046557,0,0,4.88359444852299,6.58592269424615,0,0,11.087326221068,0,0.871533458600294,0,0,0,0,0,0,4.27910715122155,0.289562613335158,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,1.47229790062968,1.50051156317903,2.44138521329762,0,0,0.157702415033935,0,14.1444666872028,31.8370505678379,0,35.2039567223781,14.5651643147945,0.0868836144680828,0,0,0,0,0,0,0,0.604780586659361,2.72918588600655,53.2513047309577,11.2264037773229,0,24.5619479552018,5.79074116116987,1.48418066444991,0,0,0.0821271560138091,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,69.592793261941,64.4399194379792,0,0,24.1025894766239,0,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,4.40737285562896,1.3940745403212,0.308033580176089,0,2.60979897622522,6.67167188774112,12.8812398067792,1.116475108079,0.316379424718726,0.38126038784765,0,0,0,2.35484592059769,0,0,0.235624804691373,0,28.5318578111415,0,0,3.41198885483798,4.22600587027022,0,0,0,0.551365343546124,24.5472420839251,18.414937180658,0,0.655894752046633,2.84074527747786,17.9697628897855,1.40847801266121,6.88374490579447,21.2217928588342,2.49669736036875,0,2.53329162357197,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.57894367102995,0.552567831062295,0,0,0,0,0.179736702294654,0,0,0.295930216910801,0,0,0,0,1.99613798001194,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,23.9278317278703,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98578579323551,0.707660516026713,1.22206028986725,0,0,0,0,0,0,0,0,0,0,0,0.91821828489147,0.821425535170343,0,0,0,0,0,0,0,1.10939738410511,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.90392296312213,0,0,0,0,0,0,0,0,0,0,0,0,0,6.52340189153347,5.33474516192899,0.101998217636322,0,0,0,0,0,0,5.58564802544508,5.04152932825704,10.0502223440754,0.399358000997982,0,0.223171457441873,0.335917362433631,2.52209918479682,0,0,0,0,0,0,0,0,1.28602518772015,0.687697182986169,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0.662091970365432,0,0,0,0,0,0,1.87426823963964,0,0,0,0,0,0,0,0.106787412567695,1.10043013569766,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.08343305802598,2.0125432140206,0,0,0,0,0.73927574994817,0.159296767163702,0,0,0.414706207840855,0,0,0,3.04644169735036,0,0,0,0,1.99047944349308,4.00027764663154,3.09056134664514,5.72474130902062,0,0,0.428883182749851,0,0.680117776536817,18.2902754715829,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.45985072082972,0,0,0,0,0,17.1722349352846,0,0,6.34816698643231,0,0,0,0,0,0,0,0,0,0,0,0,0,19.4504868688255,0,33.2190090934179,0,0.20170506870352,0,0,0.49131575253029,0,0,0,0,0,0,0,0.496211178389294,5.80375106386748,0,0,0,0,0,0,0,37.0414100384824,0,0,0,0.889851215136553,1.02041020705668,0,0,1.82631744101899,0,0,0.214429632529969,0,13.1352810665982,0,0,0,0,0,0,33.0146282038277,32.3810938084799,0,0,0,0,0,0,0,0,0,0,2.91426595835484,0,0,1.07028081699812,0,0,0,1.31196068783506,1.5299169235277,0,0,0,0,0,0.4226557275834,25.998848547236,0,0,0,0,0,0,0,0,0,0,0,0.872701380680755,0.5290268405154,6.69591032700152,1.84870251452567,1.73050624849516,0,0.109265571963696,9.12229207282346,0.101988829741982,6.9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| |||
|short_description=p2@HAPLN1 | |||
}} |
Latest revision as of 01:11, 19 September 2015
Short description: | p2@HAPLN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HAPLN1_5end |
Coexpression cluster: | C4525_Fibroblast_Saos2_Chondrocyte_Preadipocyte_Osteoblast_trachea_pleomorphic |
Association with transcript: | 63bp_to_NM_001884, uc003kin.2_5end |
EntrezGene: | HAPLN1 |
HGNC: | 2380 |
UniProt: | P10915 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.58e-19 | 76 |
vascular associated smooth muscle cell | 5.53e-11 | 32 |
skin fibroblast | 1.53e-10 | 23 |
osteoblast | 3.22e-09 | 11 |
osteoprogenitor cell | 3.22e-09 | 11 |
mesenchyme condensation cell | 3.22e-09 | 11 |
stem cell | 2.00e-07 | 441 |
chondroblast | 4.75e-07 | 6 |
chondrocyte | 4.75e-07 | 6 |
smooth muscle cell | 6.56e-07 | 43 |
smooth muscle myoblast | 6.56e-07 | 43 |
multi fate stem cell | 8.46e-07 | 427 |
Ontology term | p-value | n |
---|---|---|
artery | 4.77e-09 | 42 |
arterial blood vessel | 4.77e-09 | 42 |
arterial system | 4.77e-09 | 42 |
epithelial tube open at both ends | 4.98e-09 | 59 |
blood vessel | 4.98e-09 | 59 |
blood vasculature | 4.98e-09 | 59 |
vascular cord | 4.98e-09 | 59 |
vasculature | 5.50e-09 | 78 |
vascular system | 5.50e-09 | 78 |
skin of body | 7.24e-09 | 41 |
splanchnic layer of lateral plate mesoderm | 1.01e-08 | 83 |
integument | 2.45e-07 | 46 |
integumental system | 2.45e-07 | 46 |
cardiovascular system | 4.01e-07 | 109 |
systemic artery | 4.89e-07 | 33 |
systemic arterial system | 4.89e-07 | 33 |
vessel | 5.77e-07 | 68 |
blood vessel layer | 6.74e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 5.97e-09 | 5 |
myotonic disease | 5.97e-09 | 5 |
muscle tissue disease | 5.97e-09 | 5 |
myopathy | 5.97e-09 | 5 |
muscular disease | 5.97e-09 | 5 |
myotonic dystrophy | 5.97e-09 | 5 |