FFCP PHASE1:Mm9::chr19:17469280..17469330,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=83|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:17469280..17469330,+|id=chr19:17469280..17469330,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000213,9.51e-16,1;CL:0002078,9.51e-16,1;CL:0000115,9.51e-16,1;CL:0002262,9.51e-16,1;CL:1000398,9.51e-16,1;CL:0002603,2.13e-08,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004872!9.68e-07!33|ontology_enrichment_uberon_v019_2=UBERON:0002369,7.62e-34,7;UBERON:0006858,7.62e-34,7;UBERON:0003064,2.74e-17,14;UBERON:0002394,9.51e-16,1;UBERON:0001281,9.51e-16,1;UBERON:0000353,9.51e-16,1;UBERON:0003497,9.51e-16,1;UBERON:0003909,9.51e-16,1;UBERON:0003928,9.51e-16,1;UBERON:0003835,9.51e-16,1;UBERON:0003513,9.51e-16,1;UBERON:0001280,9.51e-16,1;UBERON:0004647,9.51e-16,1;UBERON:0002294,9.51e-16,1;UBERON:0001173,9.51e-16,1;UBERON:0004912,9.51e-16,1;UBERON:0005171,9.51e-16,1;UBERON:0005256,1.47e-08,45;UBERON:0005172,6.88e-08,49;UBERON:0005173,6.88e-08,49;UBERON:0002417,6.88e-08,49;UBERON:0000916,6.88e-08,49|phase1_expression=0.160148847104794,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0.333109761815663,0.404950534779652,0,0,0,0,0.0850432901510698,0,0,0,0.22940928106717,0.57423196411502,0.430761996159075,0.215471232685889,0.380046838912748,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0,0.550640256485045,2.34717403304412,0,0,0.194429899074283,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,2.6087803983151,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0.35333957451034,0,0,0,0,0.649473123033642,0.506719730950197,0.505524445014783,0,0,0,0.520455980298408,5.48037860961854,6.91846491768175,12.5099791658677,2.58695155698551,0,0.741584903203122,0,0,0,0,0,0,0.292780797011547,0,0.255457055208591,0,0,0,0.149790639404823,0,0,0.347648640384553,0.255715457330331,0.20778804455956,0,0,0.124406970610093,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0.469052119962192,0.180062061461015,0.23674473558521,0,0.462801338662135,0.232533944750408,0.536546802799238,0.350296027101508,0,0.492502392237286,0.162137619091711,0.438599962275997,0.439100230582101,0,0,0,0.660837565967596,0,0,0,0,0,0,0.760902504450237,0,0.658795818896044,0.251335208800269,0.795825888164603,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482354319504834,0.25462585178142,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0.167506257441816,0,0,0.157635144106191,0,0,0.491589944147214,0.172684981865896,0.144649058581512,0,0,0,0,0.321101179975584,0.117211686592203,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0.642642632843614,0,0,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0.608929898229199,0,0.21183207086382,0,0,0,0.0603129249281559,0,0.164140899745061,0,0,0,0,0.185194527369712,0.188368457004691,0,0.457556346413045,0,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0,0.0826534557253359,0.26175594198403,0.259229946583586,0,0,0,0.165458490457098,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0.100966449948148,0,0.100826185136841,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0.188626341386076,0,0,0.17230640686684,0,0,0,0,0,0,0.177475806159338,0,0,0,0.0846146078916765,0.182927972872773,0.263069711437843,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p@chr19:17469280..17469330,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=83 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:17469280..17469330,+ | |||
|description=CAGE_peak_at_chr19:17469280..17469330,+ | |||
|id=chr19:17469280..17469330,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,9.51e-16,1;CL:0002078,9.51e-16,1;CL:0000115,9.51e-16,1;CL:0002262,9.51e-16,1;CL:1000398,9.51e-16,1;CL:0002603,2.13e-08,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!9.68e-07!33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,7.62e-34,7;UBERON:0006858,7.62e-34,7;UBERON:0003064,2.74e-17,14;UBERON:0002394,9.51e-16,1;UBERON:0001281,9.51e-16,1;UBERON:0000353,9.51e-16,1;UBERON:0003497,9.51e-16,1;UBERON:0003909,9.51e-16,1;UBERON:0003928,9.51e-16,1;UBERON:0003835,9.51e-16,1;UBERON:0003513,9.51e-16,1;UBERON:0001280,9.51e-16,1;UBERON:0004647,9.51e-16,1;UBERON:0002294,9.51e-16,1;UBERON:0001173,9.51e-16,1;UBERON:0004912,9.51e-16,1;UBERON:0005171,9.51e-16,1;UBERON:0005256,1.47e-08,45;UBERON:0005172,6.88e-08,49;UBERON:0005173,6.88e-08,49;UBERON:0002417,6.88e-08,49;UBERON:0000916,6.88e-08,49 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0.333109761815663,0.404950534779652,0,0,0,0,0.0850432901510698,0,0,0,0.22940928106717,0.57423196411502,0.430761996159075,0.215471232685889,0.380046838912748,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0,0.550640256485045,2.34717403304412,0,0,0.194429899074283,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,2.6087803983151,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0.35333957451034,0,0,0,0,0.649473123033642,0.506719730950197,0.505524445014783,0,0,0,0.520455980298408,5.48037860961854,6.91846491768175,12.5099791658677,2.58695155698551,0,0.741584903203122,0,0,0,0,0,0,0.292780797011547,0,0.255457055208591,0,0,0,0.149790639404823,0,0,0.347648640384553,0.255715457330331,0.20778804455956,0,0,0.124406970610093,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0.469052119962192,0.180062061461015,0.23674473558521,0,0.462801338662135,0.232533944750408,0.536546802799238,0.350296027101508,0,0.492502392237286,0.162137619091711,0.438599962275997,0.439100230582101,0,0,0,0.660837565967596,0,0,0,0,0,0,0.760902504450237,0,0.658795818896044,0.251335208800269,0.795825888164603,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482354319504834,0.25462585178142,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0.167506257441816,0,0,0.157635144106191,0,0,0.491589944147214,0.172684981865896,0.144649058581512,0,0,0,0,0.321101179975584,0.117211686592203,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0.642642632843614,0,0,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0.608929898229199,0,0.21183207086382,0,0,0,0.0603129249281559,0,0.164140899745061,0,0,0,0,0.185194527369712,0.188368457004691,0,0.457556346413045,0,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0,0.0826534557253359,0.26175594198403,0.259229946583586,0,0,0,0.165458490457098,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0.100966449948148,0,0.100826185136841,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0.188626341386076,0,0,0.17230640686684,0,0,0,0,0,0,0.177475806159338,0,0,0,0.0846146078916765,0.182927972872773,0.263069711437843,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr19:17469280..17469330,+ | |||
}} |
Latest revision as of 08:59, 6 August 2015
Short description: | p@chr19:17469280..17469330, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:17469280..17469330, + |
Coexpression cluster: | MCL_coexpression_mm9:83 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 9.51e-16 | 1 |
meso-epithelial cell | 9.51e-16 | 1 |
endothelial cell | 9.51e-16 | 1 |
endothelial cell of sinusoid | 9.51e-16 | 1 |
endothelial cell of hepatic sinusoid | 9.51e-16 | 1 |
astrocyte of the cerebellum | 2.13e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
adrenal gland | 7.62e-34 | 7 |
adrenal/interrenal gland | 7.62e-34 | 7 |
intermediate mesoderm | 2.74e-17 | 14 |
bile duct | 9.51e-16 | 1 |
hepatic sinusoid | 9.51e-16 | 1 |
parenchyma | 9.51e-16 | 1 |
abdomen blood vessel | 9.51e-16 | 1 |
sinusoid | 9.51e-16 | 1 |
digestive system duct | 9.51e-16 | 1 |
abdominal segment blood vessel | 9.51e-16 | 1 |
trunk blood vessel | 9.51e-16 | 1 |
liver parenchyma | 9.51e-16 | 1 |
liver lobule | 9.51e-16 | 1 |
biliary system | 9.51e-16 | 1 |
biliary tree | 9.51e-16 | 1 |
biliary bud | 9.51e-16 | 1 |
hepatic duct | 9.51e-16 | 1 |
trunk mesenchyme | 1.47e-08 | 45 |
abdomen element | 6.88e-08 | 49 |
abdominal segment element | 6.88e-08 | 49 |
abdominal segment of trunk | 6.88e-08 | 49 |
abdomen | 6.88e-08 | 49 |