FFCP PHASE1:Mm9::chr19:6363896..6363941,+: Difference between revisions
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{{FFCP|EntrezGene=22668|HGNC=|UniProt=F8WHF9,E9Q4Q2|association_with_transcript=0bp_to_ENSMUST00000113485,ENSMUST00000113487,ENSMUST00000131083_5end|description=CAGE_peak_1_at_Sf1_5end|id=chr19:6363896..6363941,+|ontology_enrichment_celltype=CL:0000791!5.03e-07!9;CL:0000789!5.03e-07!9;CL:0002420!5.03e-07!9;CL:0002419!5.03e-07!9;CL:0000790!5.03e-07!9|ontology_enrichment_celltype_v019_2=CL:0000791,5.03e-07,9;CL:0000789,5.03e-07,9;CL:0002420,5.03e-07,9;CL:0002419,5.03e-07,9;CL:0000790,5.03e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!2.88e-13!29;UBERON:0002370!3.29e-12!23;UBERON:0000974!3.29e-12!23;UBERON:0004807!3.29e-12!23;UBERON:0005058!3.29e-12!23;UBERON:0003351!3.29e-12!23;UBERON:0009113!3.29e-12!23;UBERON:0003295!3.29e-12!23;UBERON:0009722!3.29e-12!23;UBERON:0005562!3.29e-12!23;UBERON:0007690!3.29e-12!23;UBERON:0003408!2.08e-11!24;UBERON:0006562!2.46e-11!24;UBERON:0001557!2.46e-11!24;UBERON:0001042!2.46e-11!24;UBERON:0008814!2.46e-11!24;UBERON:0009145!2.46e-11!24;UBERON:0002390!1.28e-09!45;UBERON:0003061!1.28e-09!45;UBERON:0000065!4.70e-09!41;UBERON:0001004!1.22e-08!42;UBERON:0002193!1.40e-08!48;UBERON:0000072!3.64e-08!27;UBERON:0005057!8.60e-08!51;UBERON:0001048!6.45e-07!147|ontology_enrichment_uberon_v019_2=UBERON:0004177,2.88e-13,29;UBERON:0005057,2.88e-13,29;UBERON:0002370,3.29e-12,23;UBERON:0000974,3.29e-12,23;UBERON:0004807,3.29e-12,23;UBERON:0005058,3.29e-12,23;UBERON:0003351,3.29e-12,23;UBERON:0009113,3.29e-12,23;UBERON:0003295,3.29e-12,23;UBERON:0009722,3.29e-12,23;UBERON:0005562,3.29e-12,23;UBERON:0007690,3.29e-12,23;UBERON:0003408,2.08e-11,24;UBERON:0006562,2.46e-11,24;UBERON:0001557,2.46e-11,24;UBERON:0001042,2.46e-11,24;UBERON:0008814,2.46e-11,24;UBERON:0009145,2.46e-11,24;UBERON:0000077,4.71e-11,35;UBERON:0000153,4.74e-11,43;UBERON:0007811,1.05e-09,36;UBERON:0002390,1.28e-09,45;UBERON:0003061,1.28e-09,45;UBERON:0000065,4.70e-09,41;UBERON:0001004,1.22e-08,42;UBERON:0002193,1.40e-08,48;UBERON:0002405,1.40e-08,48;UBERON:0000072,3.64e-08,27|phase1_expression=81.1954654821305,57.2319668528552,50.5049155722385,47.7893453864791,59.6065918636153,78.3996199828525,65.4115393667472,125.507870385212,177.3937899111,173.909943057241,108.723409823196,116.547124292186,122.408521900812,133.578374896228,94.9362821174639,85.0396123037269,116.127271769272,95.7427671862251,95.9801035240171,91.2437751365765,58.509783623936,69.205792987017,47.0159620450084,38.7181663160044,39.6878056246204,57.997428375617,37.4762936658395,37.7074657200306,34.3942389216037,56.4547490662245,34.1464986409169,128.276196038846,113.786985703145,126.785344812351,64.125059584783,48.0418125086043,58.1882665347752,67.802124179379,57.0374801502374,62.299325532882,88.8229546926832,68.987593980803,74.2830840137665,69.4950435225187,70.2542133351236,55.0640256485045,117.358701652206,69.1139745726015,60.6333864347142,43.941157190788,56.5545143366465,61.8136026769378,105.535259210316,150.87532553836,156.619710400388,61.7422646486273,51.2894857490375,46.9261603972473,95.6956859865898,81.4646108078931,81.7642510522971,88.7772674021126,72.0328784850023,66.1426292201828,75.1538435550901,61.1012898853646,68.0092250876779,77.612097674954,109.392540985444,92.7490796338715,91.9120081105539,63.4145185376444,55.8797408607582,87.4584306394772,96.7080802574005,59.7492211296514,38.540558349786,47.2443150915195,54.5303193059664,89.155130505611,87.553674927506,95.3271468118871,47.4611098302348,43.895483582471,49.9650270230169,63.6397744623122,56.9486723196412,87.9805384295419,78.5280624865119,68.014404096107,107.249860819621,81.7402683132317,105.395556724701,49.1129904390414,43.5350199689938,51.5230920161936,49.2959914662449,61.0140554829447,55.0746329758082,56.1809923471441,74.506169061864,88.5452694158793,183.459772588785,191.988009851399,41.1332977921307,45.6047757855177,54.0911156165818,52.9813201896438,151.478661933595,67.8380575526249,82.7525008674468,67.2868707069832,75.8724985972433,57.4253260505492,81.0186192165006,69.4936250053105,60.809962062656,79.2404475921116,70.7688441559899,89.9423685707595,94.5201699010484,77.0951652485003,33.550517019262,82.5641847572563,79.7991952959264,55.6896380354729,101.723040705526,80.98686868411,83.9934200952958,57.5196055314519,57.1875753523283,82.8062180423777,48.8446339740297,46.5402132341202,51.7392230953305,58.0823721782572,104.181669218874,70.2899383947026,68.2351447770922,72.81288213672,95.6385255775872,65.0622955546728,83.008641840266,80.0242582707647,111.511822109026,82.6333495837281,79.1779572529709,69.0737999873172,128.694091780907,118.569512265223,92.726242434401,76.0609191523685,88.9751197521913,74.1777114692215,85.3995866092965,84.1914948642226,65.3058264201308,64.0796288715641,72.1775288464805,87.6142017825173,85.367485833119,72.74507283025,82.150423248068,68.0804241846017,71.7342074926309,66.9697760881175,71.8972715750979,80.9183822604485,76.6848900596819,53.6827607538641,60.3151943021167,48.5383958252103,56.4243796298,55.2930445292732,4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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=22668 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=F8WHF9,E9Q4Q2 | |||
|association_with_transcript=0bp_to_ENSMUST00000113485,ENSMUST00000113487,ENSMUST00000131083_5end | |||
|cluster_id=chr19:6363896..6363941,+ | |||
|description=CAGE_peak_1_at_Sf1_5end | |||
|id=chr19:6363896..6363941,+ | |||
|ontology_enrichment_celltype=CL:0000791!5.03e-07!9;CL:0000789!5.03e-07!9;CL:0002420!5.03e-07!9;CL:0002419!5.03e-07!9;CL:0000790!5.03e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.03e-07,9;CL:0000789,5.03e-07,9;CL:0002420,5.03e-07,9;CL:0002419,5.03e-07,9;CL:0000790,5.03e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!2.88e-13!29;UBERON:0002370!3.29e-12!23;UBERON:0000974!3.29e-12!23;UBERON:0004807!3.29e-12!23;UBERON:0005058!3.29e-12!23;UBERON:0003351!3.29e-12!23;UBERON:0009113!3.29e-12!23;UBERON:0003295!3.29e-12!23;UBERON:0009722!3.29e-12!23;UBERON:0005562!3.29e-12!23;UBERON:0007690!3.29e-12!23;UBERON:0003408!2.08e-11!24;UBERON:0006562!2.46e-11!24;UBERON:0001557!2.46e-11!24;UBERON:0001042!2.46e-11!24;UBERON:0008814!2.46e-11!24;UBERON:0009145!2.46e-11!24;UBERON:0002390!1.28e-09!45;UBERON:0003061!1.28e-09!45;UBERON:0000065!4.70e-09!41;UBERON:0001004!1.22e-08!42;UBERON:0002193!1.40e-08!48;UBERON:0000072!3.64e-08!27;UBERON:0005057!8.60e-08!51;UBERON:0001048!6.45e-07!147 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,2.88e-13,29;UBERON:0005057,2.88e-13,29;UBERON:0002370,3.29e-12,23;UBERON:0000974,3.29e-12,23;UBERON:0004807,3.29e-12,23;UBERON:0005058,3.29e-12,23;UBERON:0003351,3.29e-12,23;UBERON:0009113,3.29e-12,23;UBERON:0003295,3.29e-12,23;UBERON:0009722,3.29e-12,23;UBERON:0005562,3.29e-12,23;UBERON:0007690,3.29e-12,23;UBERON:0003408,2.08e-11,24;UBERON:0006562,2.46e-11,24;UBERON:0001557,2.46e-11,24;UBERON:0001042,2.46e-11,24;UBERON:0008814,2.46e-11,24;UBERON:0009145,2.46e-11,24;UBERON:0000077,4.71e-11,35;UBERON:0000153,4.74e-11,43;UBERON:0007811,1.05e-09,36;UBERON:0002390,1.28e-09,45;UBERON:0003061,1.28e-09,45;UBERON:0000065,4.70e-09,41;UBERON:0001004,1.22e-08,42;UBERON:0002193,1.40e-08,48;UBERON:0002405,1.40e-08,48;UBERON:0000072,3.64e-08,27 | |||
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| |||
|short_description=p1@Sf1 | |||
}} |
Latest revision as of 03:03, 26 September 2015
Short description: | p1@Sf1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Sf1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000113485, ENSMUST00000113487, ENSMUST00000131083_5end |
EntrezGene: | Sf1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 5.03e-07 | 9 |
alpha-beta T cell | 5.03e-07 | 9 |
immature T cell | 5.03e-07 | 9 |
mature T cell | 5.03e-07 | 9 |
immature alpha-beta T cell | 5.03e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 2.88e-13 | 29 |
immune organ | 2.88e-13 | 29 |
thymus | 3.29e-12 | 23 |
neck | 3.29e-12 | 23 |
respiratory system epithelium | 3.29e-12 | 23 |
hemolymphoid system gland | 3.29e-12 | 23 |
pharyngeal epithelium | 3.29e-12 | 23 |
thymic region | 3.29e-12 | 23 |
pharyngeal gland | 3.29e-12 | 23 |
entire pharyngeal arch endoderm | 3.29e-12 | 23 |
thymus primordium | 3.29e-12 | 23 |
early pharyngeal endoderm | 3.29e-12 | 23 |
gland of gut | 2.08e-11 | 24 |
pharynx | 2.46e-11 | 24 |
upper respiratory tract | 2.46e-11 | 24 |
chordate pharynx | 2.46e-11 | 24 |
pharyngeal arch system | 2.46e-11 | 24 |
pharyngeal region of foregut | 2.46e-11 | 24 |
mixed endoderm/mesoderm-derived structure | 4.71e-11 | 35 |
anterior region of body | 4.74e-11 | 43 |
craniocervical region | 1.05e-09 | 36 |
hematopoietic system | 1.28e-09 | 45 |
blood island | 1.28e-09 | 45 |
respiratory tract | 4.70e-09 | 41 |
respiratory system | 1.22e-08 | 42 |
hemolymphoid system | 1.40e-08 | 48 |
immune system | 1.40e-08 | 48 |
segment of respiratory tract | 3.64e-08 | 27 |