FFCP PHASE1:Mm9::chr1:126320102..126320107,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=236|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:126320102..126320107,-|id=chr1:126320102..126320107,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002021!3.14e-43!10;UBERON:0000411!3.14e-43!10;UBERON:0001950!3.14e-43!10;UBERON:0002619!2.07e-25!17;UBERON:0000956!1.51e-20!21;UBERON:0001869!1.51e-20!21;UBERON:0000203!1.51e-20!21;UBERON:0002791!7.92e-15!29;UBERON:0003528!7.92e-15!29;UBERON:0001893!7.92e-15!29;UBERON:0002020!1.30e-12!34;UBERON:0003056!3.26e-11!49;UBERON:0002780!5.85e-11!39;UBERON:0001890!5.85e-11!39;UBERON:0006240!5.85e-11!39;UBERON:0003080!1.12e-10!40;UBERON:0001851!6.88e-10!1;UBERON:0005889!6.88e-10!1;UBERON:0000470!6.88e-10!1;UBERON:0002616!1.17e-08!49;UBERON:0000033!1.28e-08!63;UBERON:0000955!1.78e-08!50;UBERON:0006238!1.78e-08!50;UBERON:0001049!3.88e-08!52;UBERON:0005068!3.88e-08!52;UBERON:0006241!3.88e-08!52;UBERON:0007135!3.88e-08!52;UBERON:0002346!1.36e-07!71;UBERON:0003075!1.36e-07!71;UBERON:0007284!1.36e-07!71|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.37e-35,10;UBERON:0000411,2.37e-35,10;UBERON:0001950,2.37e-35,10;UBERON:0002619,3.13e-21,17;UBERON:0000956,2.25e-17,21;UBERON:0001869,2.25e-17,21;UBERON:0000203,2.25e-17,21;UBERON:0003528,7.80e-13,29;UBERON:0002791,7.80e-13,29;UBERON:0001893,7.80e-13,29;UBERON:0002020,4.50e-11,34;UBERON:0002780,9.26e-10,39;UBERON:0001890,9.26e-10,39;UBERON:0006240,9.26e-10,39;UBERON:0003080,1.55e-09,40;UBERON:0002616,2.15e-08,46;UBERON:0000955,3.12e-08,47;UBERON:0006238,3.12e-08,47;UBERON:0003056,6.29e-08,49;UBERON:0001049,1.63e-07,52;UBERON:0005068,1.63e-07,52;UBERON:0006241,1.63e-07,52;UBERON:0007135,1.63e-07,52;UBERON:0000073,2.91e-07,54|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255715457330331,0,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0,0.572895513439397,4.29632955859219,0.685082519770642,0,1.35004500046361,0.900642406448441,0,1.03552062350364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr1:126320102..126320107,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=236 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:126320102..126320107,- | |||
|description=CAGE_peak_at_chr1:126320102..126320107,- | |||
|id=chr1:126320102..126320107,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!3.14e-43!10;UBERON:0000411!3.14e-43!10;UBERON:0001950!3.14e-43!10;UBERON:0002619!2.07e-25!17;UBERON:0000956!1.51e-20!21;UBERON:0001869!1.51e-20!21;UBERON:0000203!1.51e-20!21;UBERON:0002791!7.92e-15!29;UBERON:0003528!7.92e-15!29;UBERON:0001893!7.92e-15!29;UBERON:0002020!1.30e-12!34;UBERON:0003056!3.26e-11!49;UBERON:0002780!5.85e-11!39;UBERON:0001890!5.85e-11!39;UBERON:0006240!5.85e-11!39;UBERON:0003080!1.12e-10!40;UBERON:0001851!6.88e-10!1;UBERON:0005889!6.88e-10!1;UBERON:0000470!6.88e-10!1;UBERON:0002616!1.17e-08!49;UBERON:0000033!1.28e-08!63;UBERON:0000955!1.78e-08!50;UBERON:0006238!1.78e-08!50;UBERON:0001049!3.88e-08!52;UBERON:0005068!3.88e-08!52;UBERON:0006241!3.88e-08!52;UBERON:0007135!3.88e-08!52;UBERON:0002346!1.36e-07!71;UBERON:0003075!1.36e-07!71;UBERON:0007284!1.36e-07!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.37e-35,10;UBERON:0000411,2.37e-35,10;UBERON:0001950,2.37e-35,10;UBERON:0002619,3.13e-21,17;UBERON:0000956,2.25e-17,21;UBERON:0001869,2.25e-17,21;UBERON:0000203,2.25e-17,21;UBERON:0003528,7.80e-13,29;UBERON:0002791,7.80e-13,29;UBERON:0001893,7.80e-13,29;UBERON:0002020,4.50e-11,34;UBERON:0002780,9.26e-10,39;UBERON:0001890,9.26e-10,39;UBERON:0006240,9.26e-10,39;UBERON:0003080,1.55e-09,40;UBERON:0002616,2.15e-08,46;UBERON:0000955,3.12e-08,47;UBERON:0006238,3.12e-08,47;UBERON:0003056,6.29e-08,49;UBERON:0001049,1.63e-07,52;UBERON:0005068,1.63e-07,52;UBERON:0006241,1.63e-07,52;UBERON:0007135,1.63e-07,52;UBERON:0000073,2.91e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255715457330331,0,0,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0,0.572895513439397,4.29632955859219,0.685082519770642,0,1.35004500046361,0.900642406448441,0,1.03552062350364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:126320102..126320107,- | |||
}} |
Latest revision as of 16:26, 4 August 2015
Short description: | p@chr1:126320102..126320107, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:126320102..126320107, - |
Coexpression cluster: | MCL_coexpression_mm9:236 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 2.37e-35 | 10 |
visual cortex | 2.37e-35 | 10 |
neocortex | 2.37e-35 | 10 |
regional part of cerebral cortex | 3.13e-21 | 17 |
cerebral cortex | 2.25e-17 | 21 |
cerebral hemisphere | 2.25e-17 | 21 |
pallium | 2.25e-17 | 21 |
brain grey matter | 7.80e-13 | 29 |
regional part of telencephalon | 7.80e-13 | 29 |
telencephalon | 7.80e-13 | 29 |
gray matter | 4.50e-11 | 34 |
regional part of forebrain | 9.26e-10 | 39 |
forebrain | 9.26e-10 | 39 |
future forebrain | 9.26e-10 | 39 |
anterior neural tube | 1.55e-09 | 40 |
regional part of brain | 2.15e-08 | 46 |
brain | 3.12e-08 | 47 |
future brain | 3.12e-08 | 47 |
pre-chordal neural plate | 6.29e-08 | 49 |
neural tube | 1.63e-07 | 52 |
neural rod | 1.63e-07 | 52 |
future spinal cord | 1.63e-07 | 52 |
neural keel | 1.63e-07 | 52 |
regional part of nervous system | 2.91e-07 | 54 |