FFCP PHASE1:Mm9::chr1:174128636..174128647,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=176|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:174128636..174128647,-|id=chr1:174128636..174128647,-|ontology_enrichment_celltype=CL:0000055!1.67e-16!50;CL:0002319!1.44e-14!43;CL:0000221!5.70e-14!44;CL:0000133!5.70e-14!44;CL:0000117!1.99e-11!23;CL:0000337!1.99e-11!23;CL:0000393!4.15e-11!39;CL:0000211!4.15e-11!39;CL:0002321!4.75e-09!70;CL:0000220!4.75e-09!70;CL:0000540!8.63e-09!33;CL:0000047!8.63e-09!33;CL:0000031!8.63e-09!33;CL:0000404!8.63e-09!33;CL:0000333!1.39e-07!10;CL:0000095!1.39e-07!10;CL:0000243!1.39e-07!10;CL:0000123!1.39e-07!10;CL:0000125!1.39e-07!10;CL:0000030!1.39e-07!10;CL:0000339!1.39e-07!10;CL:0002453!4.63e-07!8|ontology_enrichment_celltype_v019_2=CL:0002453,3.85e-31,8;CL:0000333,6.87e-25,10;CL:0000095,6.87e-25,10;CL:0000243,6.87e-25,10;CL:0000123,6.87e-25,10;CL:0000125,6.87e-25,10;CL:0000030,6.87e-25,10;CL:0000339,6.87e-25,10;CL:0000128,8.69e-19,6;CL:0000126,8.69e-19,6;CL:0000127,8.69e-19,6;CL:0000878,3.45e-15,2;CL:0000129,3.45e-15,2;CL:0002605,7.66e-15,2;CL:0002604,7.66e-15,2;CL:0002194,4.82e-08,4;CL:0000766,4.82e-08,4;CL:0000234,4.82e-08,4;CL:0000576,4.82e-08,4;CL:0000235,4.82e-08,4;CL:0000864,4.82e-08,4;CL:0002009,4.82e-08,4;CL:0000040,4.82e-08,4;CL:0000559,4.82e-08,4;CL:0000219,1.78e-07,54;CL:0002319,1.86e-07,43;CL:0000221,2.83e-07,44;CL:0000133,2.83e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!3.11e-19!75;UBERON:0001016!3.11e-19!75;UBERON:0001017!1.95e-18!73;UBERON:0005743!1.95e-18!73;UBERON:0001049!3.49e-17!52;UBERON:0005068!3.49e-17!52;UBERON:0006241!3.49e-17!52;UBERON:0007135!3.49e-17!52;UBERON:0002020!2.47e-16!34;UBERON:0002616!3.14e-15!49;UBERON:0002346!3.64e-15!71;UBERON:0003075!3.64e-15!71;UBERON:0007284!3.64e-15!71;UBERON:0004121!7.51e-15!102;UBERON:0000924!7.51e-15!102;UBERON:0006601!7.51e-15!102;UBERON:0000955!1.15e-14!50;UBERON:0006238!1.15e-14!50;UBERON:0000033!8.13e-13!63;UBERON:0002791!2.04e-12!29;UBERON:0003528!2.04e-12!29;UBERON:0001893!2.04e-12!29;UBERON:0003080!2.74e-11!40;UBERON:0003056!3.03e-11!49;UBERON:0002780!5.55e-11!39;UBERON:0001890!5.55e-11!39;UBERON:0006240!5.55e-11!39;UBERON:0000025!6.38e-10!114;UBERON:0007811!4.78e-09!86;UBERON:0000956!1.21e-08!21;UBERON:0001869!1.21e-08!21;UBERON:0000203!1.21e-08!21;UBERON:0004111!3.56e-08!122;UBERON:0002619!7.10e-08!17;UBERON:0000153!1.09e-07!94;UBERON:0003076!4.59e-07!12;UBERON:0003057!4.59e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0002619,5.98e-14,17;UBERON:0000956,3.01e-11,21;UBERON:0001869,3.01e-11,21;UBERON:0000203,3.01e-11,21;UBERON:0002021,7.71e-11,10;UBERON:0000411,7.71e-11,10;UBERON:0001950,7.71e-11,10;UBERON:0001017,2.89e-10,73;UBERON:0001016,5.83e-10,75;UBERON:0003528,4.58e-08,29;UBERON:0002791,4.58e-08,29;UBERON:0001893,4.58e-08,29;UBERON:0004121,1.31e-07,95;UBERON:0000924,1.31e-07,95;UBERON:0006601,1.31e-07,95;UBERON:0000073,2.31e-07,54;UBERON:0002020,7.84e-07,34|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.405507724878058,0.183546752161682,0.782391344348039,6.5407546914134,3.29529274101708,3.4997381833371,1.95980990275508,0,0,0,0,0.514518872071894,0.286533439938757,0,0.202316460859598,0,0,1.0165335962074,0,0.899899717281399,0,2.8419204597844,5.99200221036809,6.14749288514487,0.207379224616955,0.405017814995072,0,0.856952953211411,0.662605622854841,0.244981598429908,0.287536413054709,0.919218786610021,3.30347642998166,0.383062014255563,0.614426133024974,0.527545150920775,0.365950574409639,0,0.837548997004143,0.56276261003168,0.61119299110724,0.589257170947335,0.427115042397309,0.745597783301202,0.227178579999552,0.0755715601067855,0.869593466105033,0,0,0,0,0,0,0,0.259786004602869,0.35333957451034,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0.150722640552623,0.23517741427141,0,0,0,0,0,0,0,0,0,0.628340120440365,0,0,0,0,0.149790639404823,0.457500602818626,0.125654352112864,0.173824320192276,0,0.41557608911912,0,0,0.124406970610093,0,0,0.130120442962704,0.229902104433473,0.180062129805349,0,0.204109497453984,0.12811372028485,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0.154267112887378,0.232533944750408,0,0.116765342367169,0,0,0,0,0.219550115291051,0.402619256281115,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.189709611372772,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0.163863314715738,0,0,0,0.54390568381871,0,0,0.321101179975584,0,0,0,0,0.390438744296638,0,0,0.222798674082394,0,0.404810701674894,0,0,0,0,0,0.162886959353576,0,0,0,0,0.188605079755898,0.295301892880773,0,0,0,0,0,0,0,0,0,0.388076051348264,0,0,0.178368817602071,0,0.304464949114599,0,0,0,0.16488625294148,0,0,0,0,0,0.18542530201051,0,0,0.185194527369712,0,0,0,0.169978429993855,0,0,0,0,0.406638934253697,0.108005340821801,0,0,0.134864346384821,0,0,0.259229946583586,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0.288030006257865,0.316011120628178,0,0.102710957164827,0,0,0.198681354781265,0,0,0,0.0762068066549998,0,0,0,0,0,0.221985953374065,0.179427713218951,0.167884616364078,0,0.187682475451182,0,0,0,1.12950368523413,1.38097570952153,0.572895513439397,0,0,2.2661816921691,0.675022500231806,0,0.906284817968409,1.55328093525546,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.188218760830661,0.0846146078916765,0.182927972872773,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0|short_description=p@chr1:174128636..174128647,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=176 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:174128636..174128647,- | |||
|description=CAGE_peak_at_chr1:174128636..174128647,- | |||
|id=chr1:174128636..174128647,- | |||
|ontology_enrichment_celltype=CL:0000055!1.67e-16!50;CL:0002319!1.44e-14!43;CL:0000221!5.70e-14!44;CL:0000133!5.70e-14!44;CL:0000117!1.99e-11!23;CL:0000337!1.99e-11!23;CL:0000393!4.15e-11!39;CL:0000211!4.15e-11!39;CL:0002321!4.75e-09!70;CL:0000220!4.75e-09!70;CL:0000540!8.63e-09!33;CL:0000047!8.63e-09!33;CL:0000031!8.63e-09!33;CL:0000404!8.63e-09!33;CL:0000333!1.39e-07!10;CL:0000095!1.39e-07!10;CL:0000243!1.39e-07!10;CL:0000123!1.39e-07!10;CL:0000125!1.39e-07!10;CL:0000030!1.39e-07!10;CL:0000339!1.39e-07!10;CL:0002453!4.63e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,3.85e-31,8;CL:0000333,6.87e-25,10;CL:0000095,6.87e-25,10;CL:0000243,6.87e-25,10;CL:0000123,6.87e-25,10;CL:0000125,6.87e-25,10;CL:0000030,6.87e-25,10;CL:0000339,6.87e-25,10;CL:0000128,8.69e-19,6;CL:0000126,8.69e-19,6;CL:0000127,8.69e-19,6;CL:0000878,3.45e-15,2;CL:0000129,3.45e-15,2;CL:0002605,7.66e-15,2;CL:0002604,7.66e-15,2;CL:0002194,4.82e-08,4;CL:0000766,4.82e-08,4;CL:0000234,4.82e-08,4;CL:0000576,4.82e-08,4;CL:0000235,4.82e-08,4;CL:0000864,4.82e-08,4;CL:0002009,4.82e-08,4;CL:0000040,4.82e-08,4;CL:0000559,4.82e-08,4;CL:0000219,1.78e-07,54;CL:0002319,1.86e-07,43;CL:0000221,2.83e-07,44;CL:0000133,2.83e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.11e-19!75;UBERON:0001016!3.11e-19!75;UBERON:0001017!1.95e-18!73;UBERON:0005743!1.95e-18!73;UBERON:0001049!3.49e-17!52;UBERON:0005068!3.49e-17!52;UBERON:0006241!3.49e-17!52;UBERON:0007135!3.49e-17!52;UBERON:0002020!2.47e-16!34;UBERON:0002616!3.14e-15!49;UBERON:0002346!3.64e-15!71;UBERON:0003075!3.64e-15!71;UBERON:0007284!3.64e-15!71;UBERON:0004121!7.51e-15!102;UBERON:0000924!7.51e-15!102;UBERON:0006601!7.51e-15!102;UBERON:0000955!1.15e-14!50;UBERON:0006238!1.15e-14!50;UBERON:0000033!8.13e-13!63;UBERON:0002791!2.04e-12!29;UBERON:0003528!2.04e-12!29;UBERON:0001893!2.04e-12!29;UBERON:0003080!2.74e-11!40;UBERON:0003056!3.03e-11!49;UBERON:0002780!5.55e-11!39;UBERON:0001890!5.55e-11!39;UBERON:0006240!5.55e-11!39;UBERON:0000025!6.38e-10!114;UBERON:0007811!4.78e-09!86;UBERON:0000956!1.21e-08!21;UBERON:0001869!1.21e-08!21;UBERON:0000203!1.21e-08!21;UBERON:0004111!3.56e-08!122;UBERON:0002619!7.10e-08!17;UBERON:0000153!1.09e-07!94;UBERON:0003076!4.59e-07!12;UBERON:0003057!4.59e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,5.98e-14,17;UBERON:0000956,3.01e-11,21;UBERON:0001869,3.01e-11,21;UBERON:0000203,3.01e-11,21;UBERON:0002021,7.71e-11,10;UBERON:0000411,7.71e-11,10;UBERON:0001950,7.71e-11,10;UBERON:0001017,2.89e-10,73;UBERON:0001016,5.83e-10,75;UBERON:0003528,4.58e-08,29;UBERON:0002791,4.58e-08,29;UBERON:0001893,4.58e-08,29;UBERON:0004121,1.31e-07,95;UBERON:0000924,1.31e-07,95;UBERON:0006601,1.31e-07,95;UBERON:0000073,2.31e-07,54;UBERON:0002020,7.84e-07,34 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0.140788722151667,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.405507724878058,0.183546752161682,0.782391344348039,6.5407546914134,3.29529274101708,3.4997381833371,1.95980990275508,0,0,0,0,0.514518872071894,0.286533439938757,0,0.202316460859598,0,0,1.0165335962074,0,0.899899717281399,0,2.8419204597844,5.99200221036809,6.14749288514487,0.207379224616955,0.405017814995072,0,0.856952953211411,0.662605622854841,0.244981598429908,0.287536413054709,0.919218786610021,3.30347642998166,0.383062014255563,0.614426133024974,0.527545150920775,0.365950574409639,0,0.837548997004143,0.56276261003168,0.61119299110724,0.589257170947335,0.427115042397309,0.745597783301202,0.227178579999552,0.0755715601067855,0.869593466105033,0,0,0,0,0,0,0,0.259786004602869,0.35333957451034,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0.150722640552623,0.23517741427141,0,0,0,0,0,0,0,0,0,0.628340120440365,0,0,0,0,0.149790639404823,0.457500602818626,0.125654352112864,0.173824320192276,0,0.41557608911912,0,0,0.124406970610093,0,0,0.130120442962704,0.229902104433473,0.180062129805349,0,0.204109497453984,0.12811372028485,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0.154267112887378,0.232533944750408,0,0.116765342367169,0,0,0,0,0.219550115291051,0.402619256281115,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.189709611372772,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0.163863314715738,0,0,0,0.54390568381871,0,0,0.321101179975584,0,0,0,0,0.390438744296638,0,0,0.222798674082394,0,0.404810701674894,0,0,0,0,0,0.162886959353576,0,0,0,0,0.188605079755898,0.295301892880773,0,0,0,0,0,0,0,0,0,0.388076051348264,0,0,0.178368817602071,0,0.304464949114599,0,0,0,0.16488625294148,0,0,0,0,0,0.18542530201051,0,0,0.185194527369712,0,0,0,0.169978429993855,0,0,0,0,0.406638934253697,0.108005340821801,0,0,0.134864346384821,0,0,0.259229946583586,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0.288030006257865,0.316011120628178,0,0.102710957164827,0,0,0.198681354781265,0,0,0,0.0762068066549998,0,0,0,0,0,0.221985953374065,0.179427713218951,0.167884616364078,0,0.187682475451182,0,0,0,1.12950368523413,1.38097570952153,0.572895513439397,0,0,2.2661816921691,0.675022500231806,0,0.906284817968409,1.55328093525546,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.188218760830661,0.0846146078916765,0.182927972872773,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:174128636..174128647,- | |||
}} |
Latest revision as of 07:15, 5 August 2015
Short description: | p@chr1:174128636..174128647, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:174128636..174128647, - |
Coexpression cluster: | MCL_coexpression_mm9:176 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 3.85e-31 | 8 |
migratory neural crest cell | 6.87e-25 | 10 |
neuron associated cell | 6.87e-25 | 10 |
glial cell (sensu Vertebrata) | 6.87e-25 | 10 |
neuron associated cell (sensu Vertebrata) | 6.87e-25 | 10 |
glial cell | 6.87e-25 | 10 |
glioblast | 6.87e-25 | 10 |
glioblast (sensu Vertebrata) | 6.87e-25 | 10 |
oligodendrocyte | 8.69e-19 | 6 |
macroglial cell | 8.69e-19 | 6 |
astrocyte | 8.69e-19 | 6 |
central nervous system macrophage | 3.45e-15 | 2 |
microglial cell | 3.45e-15 | 2 |
astrocyte of the cerebral cortex | 7.66e-15 | 2 |
astrocyte of the hippocampus | 7.66e-15 | 2 |
monopoietic cell | 4.82e-08 | 4 |
myeloid leukocyte | 4.82e-08 | 4 |
phagocyte | 4.82e-08 | 4 |
monocyte | 4.82e-08 | 4 |
macrophage | 4.82e-08 | 4 |
tissue-resident macrophage | 4.82e-08 | 4 |
macrophage dendritic cell progenitor | 4.82e-08 | 4 |
monoblast | 4.82e-08 | 4 |
promonocyte | 4.82e-08 | 4 |
motile cell | 1.78e-07 | 54 |
neural cell | 1.86e-07 | 43 |
ectodermal cell | 2.83e-07 | 44 |
neurectodermal cell | 2.83e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 5.98e-14 | 17 |
cerebral cortex | 3.01e-11 | 21 |
cerebral hemisphere | 3.01e-11 | 21 |
pallium | 3.01e-11 | 21 |
occipital lobe | 7.71e-11 | 10 |
visual cortex | 7.71e-11 | 10 |
neocortex | 7.71e-11 | 10 |
central nervous system | 2.89e-10 | 73 |
nervous system | 5.83e-10 | 75 |
brain grey matter | 4.58e-08 | 29 |
regional part of telencephalon | 4.58e-08 | 29 |
telencephalon | 4.58e-08 | 29 |
ectoderm-derived structure | 1.31e-07 | 95 |
ectoderm | 1.31e-07 | 95 |
presumptive ectoderm | 1.31e-07 | 95 |
regional part of nervous system | 2.31e-07 | 54 |
gray matter | 7.84e-07 | 34 |