FFCP PHASE1:Hg19::chrX:86773106..86773119,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:86773106..86773119,+
|short_description=p5@KLHL4
|description=CAGE_peak_5_at_KLHL4_5end
|association_with_transcript=-172bp_to_AK022715_5end
|EntrezGene=5...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=56062 | |EntrezGene=56062 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6355 | |HGNC=6355 | ||
|TSSclassifier=strong | |||
|UniProt=Q9C0H6 | |UniProt=Q9C0H6 | ||
|association_with_transcript=-172bp_to_AK022715_5end | |||
|cluster_id=chrX:86773106..86773119,+ | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_5_at_KLHL4_5end | |||
|id=chrX:86773106..86773119,+ | |||
|ontology_enrichment_celltype=CL:0002139!9.42e-23!24;CL:0000071!8.85e-17!18;CL:0002546!8.85e-17!18;CL:0000115!1.44e-15!35;CL:0002078!3.35e-14!44;CL:1000413!9.51e-11!9;CL:0000213!9.60e-11!57;CL:0000215!9.60e-11!57;CL:0002543!1.46e-08!6;CL:0005020!1.48e-07!6;CL:0002138!1.48e-07!6;CL:0005022!1.48e-07!6;CL:0002618!6.42e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000071;7.44e-57;18!CL:0002139;2.37e-42;24!CL:1000413;1.18e-41;9!CL:0000115;5.65e-23;36!CL:0002543;1.80e-16;6!CL:0002544;1.95e-16;6!CL:0002548;3.04e-16;6!CL:0002078;3.26e-15;45!CL:0002618;3.45e-15;3!CL:0000213;1.70e-14;58!CL:0000215;1.70e-14;58!CL:0002557;8.62e-12;1!CL:0000076;3.26e-10;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0000071,1.13e-56,18;CL:0002546,1.13e-56,18;CL:0002139,3.25e-42,24;CL:1000413,1.47e-41,9;CL:0000115,9.81e-28,36;CL:0002078,6.23e-22,45;CL:0000213,2.42e-20,58;CL:0000215,2.42e-20,58;CL:0000076,1.32e-18,63;CL:0002543,2.22e-16,6;CL:0002544,2.60e-16,6;CL:0002548,3.38e-16,6;CL:0002618,3.22e-15,3;CL:0002557,5.05e-12,1;CL:0000222,6.28e-09,121 | |||
|ontology_enrichment_development_v019=CL:0002546;7.44e-57;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;2.62e-12;1!DOID:4549;2.62e-12;1!DOID:5861;2.62e-12;1!DOID:6496;2.62e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,2.63e-12,1;DOID:4549,2.63e-12,1;DOID:5861,2.63e-12,1;DOID:6496,2.63e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0001986!8.85e-17!18;UBERON:0004638!8.85e-17!18;UBERON:0004852!8.85e-17!18;UBERON:0000487!5.16e-13!22;UBERON:0006914!7.09e-13!25;UBERON:0000477!3.00e-12!286;UBERON:0002049!9.01e-12!79;UBERON:0007798!9.01e-12!79;UBERON:0003915!9.51e-11!9;UBERON:0004700!9.51e-11!9;UBERON:0001917!9.51e-11!9;UBERON:0000025!1.42e-10!194;UBERON:0004111!2.55e-10!241;UBERON:0004535!3.26e-10!110;UBERON:0001009!1.07e-09!113;UBERON:0000055!2.35e-09!69;UBERON:0000955!5.02e-09!69;UBERON:0006238!5.02e-09!69;UBERON:0001017!5.29e-09!82;UBERON:0000119!1.25e-08!312;UBERON:0002346!1.87e-08!90;UBERON:0003075!1.99e-08!86;UBERON:0007284!1.99e-08!86;UBERON:0005743!2.88e-08!86;UBERON:0002616!8.49e-08!59;UBERON:0004872!1.40e-07!84;UBERON:0001893!1.40e-07!34;UBERON:0000073!1.74e-07!94;UBERON:0001016!1.74e-07!94;UBERON:0003056!1.74e-07!61;UBERON:0001049!1.95e-07!57;UBERON:0005068!1.95e-07!57;UBERON:0006241!1.95e-07!57;UBERON:0007135!1.95e-07!57;UBERON:0001638!2.13e-07!9;UBERON:0003920!2.13e-07!9;UBERON:0004582!2.13e-07!9;UBERON:0000483!2.47e-07!309;UBERON:0000488!3.43e-07!4;UBERON:0000033!4.42e-07!123;UBERON:0002791!6.68e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;7.44e-57;18!UBERON:0001986;7.44e-57;18!UBERON:0004852;7.44e-57;18!UBERON:0000487;2.62e-46;22!UBERON:0003915;1.18e-41;9!UBERON:0004700;1.18e-41;9!UBERON:0001917;1.18e-41;9!UBERON:0006914;1.31e-40;25!UBERON:0000490;2.25e-27;33!UBERON:0007500;6.15e-16;56!UBERON:0001981;6.15e-16;56!UBERON:0004537;6.15e-16;56!UBERON:0001637;2.84e-11;42!UBERON:0003509;2.84e-11;42!UBERON:0004572;2.84e-11;42!UBERON:0001638;3.55e-11;9!UBERON:0003920;3.55e-11;9!UBERON:0004582;3.55e-11;9!UBERON:0000055;1.42e-10;65!UBERON:0002066;1.76e-09;5!UBERON:0003914;4.06e-09;74!UBERON:0002049;1.67e-08;75!UBERON:0007798;1.67e-08;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.13e-56,18;UBERON:0001986,1.13e-56,18;UBERON:0004852,1.13e-56,18;UBERON:0000487,3.69e-46,22;UBERON:0003915,1.47e-41,9;UBERON:0004700,1.47e-41,9;UBERON:0001917,1.47e-41,9;UBERON:0006914,1.77e-40,25;UBERON:0004872,3.22e-26,83;UBERON:0007500,5.80e-20,59;UBERON:0001981,5.80e-20,59;UBERON:0004537,5.80e-20,59;UBERON:0006965,5.80e-20,59;UBERON:0000055,4.06e-17,68;UBERON:0004535,8.78e-17,109;UBERON:0001009,2.81e-16,112;UBERON:0003914,1.70e-15,117;UBERON:0002049,1.00e-14,78;UBERON:0007798,1.00e-14,78;UBERON:0001637,1.22e-11,42;UBERON:0003509,1.22e-11,42;UBERON:0004572,1.22e-11,42;UBERON:0001638,4.08e-11,9;UBERON:0003920,4.08e-11,9;UBERON:0004582,4.08e-11,9;UBERON:0002066,1.69e-09,5;UBERON:0003081,2.33e-09,203;UBERON:0000025,1.47e-08,192;UBERON:0000948,3.37e-07,24;UBERON:0005498,3.37e-07,24;UBERON:0004140,3.37e-07,24;UBERON:0009881,3.37e-07,24;UBERON:0004141,3.37e-07,24;UBERON:0003084,3.37e-07,24;UBERON:0007005,3.37e-07,24;UBERON:0004139,3.37e-07,24;UBERON:0004291,3.37e-07,24;UBERON:0000490,5.32e-07,148 | |||
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| ||
|short_description=p5@KLHL4 | |||
}} | }} |
Latest revision as of 13:55, 16 September 2015
Short description: | p5@KLHL4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_KLHL4_5end |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | -172bp_to_AK022715_5end |
EntrezGene: | KLHL4 |
HGNC: | 6355 |
UniProt: | Q9C0H6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelial cell | 1.13e-56 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.13e-56 | 18 |
endothelial cell of vascular tree | 3.25e-42 | 24 |
endothelial cell of artery | 1.47e-41 | 9 |
endothelial cell | 9.81e-28 | 36 |
meso-epithelial cell | 6.23e-22 | 45 |
lining cell | 2.42e-20 | 58 |
barrier cell | 2.42e-20 | 58 |
squamous epithelial cell | 1.32e-18 | 63 |
vein endothelial cell | 2.22e-16 | 6 |
aortic endothelial cell | 2.60e-16 | 6 |
cardiac fibroblast | 3.38e-16 | 6 |
endothelial cell of umbilical vein | 3.22e-15 | 3 |
fibroblast of pulmonary artery | 5.05e-12 | 1 |
mesodermal cell | 6.28e-09 | 121 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 2.63e-12 | 1 |
extraosseous chondrosarcoma | 2.63e-12 | 1 |
myxoid chondrosarcoma | 2.63e-12 | 1 |
extraskeletal myxoid chondrosarcoma | 2.63e-12 | 1 |