FFCP PHASE1:Mm9::chr2:11094015..11094046,+: Difference between revisions
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{{FFCP|EntrezGene=18761|HGNC=|MCL_coexpression_id=40|UniProt=Q02111,A6H667,B1AYX8,Q8CAV6|association_with_transcript=6bp_to_ENSMUST00000028118,NM_008859,uc008iia.1,uc008iib.1,uc008iic.1_5end|description=CAGE_peak_2_at_Prkcq_5end|id=chr2:11094015..11094046,+|ontology_enrichment_celltype=CL:0000791!2.51e-07!9;CL:0000789!2.51e-07!9;CL:0002420!2.51e-07!9;CL:0002419!2.51e-07!9;CL:0000790!2.51e-07!9|ontology_enrichment_celltype_v019_2=CL:0000791,2.16e-08,9;CL:0000789,2.16e-08,9;CL:0002420,2.16e-08,9;CL:0002419,2.16e-08,9;CL:0000790,2.16e-08,9;CL:0000624,1.33e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!3.08e-10!29;UBERON:0006562!4.94e-10!24;UBERON:0001557!4.94e-10!24;UBERON:0001042!4.94e-10!24;UBERON:0008814!4.94e-10!24;UBERON:0009145!4.94e-10!24;UBERON:0002370!2.28e-09!23;UBERON:0000974!2.28e-09!23;UBERON:0004807!2.28e-09!23;UBERON:0005058!2.28e-09!23;UBERON:0003351!2.28e-09!23;UBERON:0009113!2.28e-09!23;UBERON:0003295!2.28e-09!23;UBERON:0009722!2.28e-09!23;UBERON:0005562!2.28e-09!23;UBERON:0007690!2.28e-09!23;UBERON:0003408!5.31e-09!24;UBERON:0000072!2.83e-07!27;UBERON:0007811!5.68e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0004177,7.25e-13,29;UBERON:0005057,7.25e-13,29;UBERON:0007811,7.69e-13,36;UBERON:0006562,1.05e-12,24;UBERON:0001557,1.05e-12,24;UBERON:0001042,1.05e-12,24;UBERON:0008814,1.05e-12,24;UBERON:0009145,1.05e-12,24;UBERON:0002370,6.70e-12,23;UBERON:0000974,6.70e-12,23;UBERON:0004807,6.70e-12,23;UBERON:0005058,6.70e-12,23;UBERON:0003351,6.70e-12,23;UBERON:0009113,6.70e-12,23;UBERON:0003295,6.70e-12,23;UBERON:0009722,6.70e-12,23;UBERON:0005562,6.70e-12,23;UBERON:0007690,6.70e-12,23;UBERON:0000077,2.86e-11,35;UBERON:0003408,5.49e-11,24;UBERON:0000153,2.74e-10,43;UBERON:0000072,3.93e-10,27;UBERON:0000065,2.24e-08,41;UBERON:0001004,6.64e-08,42;UBERON:0002390,3.15e-07,45;UBERON:0003061,3.15e-07,45;UBERON:0002193,6.10e-07,48;UBERON:0002405,6.10e-07,48|phase1_expression=2.24208385946712,0,0,0,0,0,0,42.2233267653954,11.9670413828917,19.6614202110475,11.1291679346578,11.1681022593471,64.0290729942709,48.4309029401246,0.999329285446988,2.42970320867791,0.699561878128147,5.52058789376916,4.79900517620086,5.09267582157636,1.44573593256819,0,0,0.159992422793407,0,0,0,0.215471232685889,0.190023419456374,0,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.777719596297134,0.55994568650145,2.87505128729943,0,37.7188313845899,31.9289109185341,0,0.286533439938757,0,0.404632921719196,0,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0,0,2.28520787523043,2.42955395046775,0,0.0958454710182364,0,2.20231761998777,3.19218345212969,3.5329502648936,0.131886287730194,0.182975287204819,0,2.51264699101243,1.12552522006336,3.0559649555362,2.65165726926301,3.41692033917847,0.559198337475902,0.605809546665472,2.72057616384428,4.34796733052517,0.860423876981386,0.679971333707751,0,0,0,18.117330196996,0,0,0,6.33795388995062,0,0,0,0,0,0,2.74041311325744,13.9826457169473,0.890652834388949,0,0.608930956624282,0.461230994512117,0.60289056221049,0.587943535678524,0.125666591329675,0,1.3013942122792,15.0383793831479,9.86777784679196,16.1214308476087,10.1823803158397,0,1.75668478206928,3.35114730901528,0.766371165625774,1.67741174308288,0,0.508280908292259,5.39246301857362,5.49000723382352,0.125654352112864,2.43354048269187,1.53429274398198,7.06479351502504,5.67844420737152,0.611036183101898,7.34001126599549,0.252722758433675,6.94458124425364,1.82168620147785,0.689706313300419,1.80062129805349,2.10986744970001,2.10913147369116,2.43416068541215,1.59292931751539,8.01980449290949,0.215567992932842,0.378212160335639,0,0.657587197282725,1.39023624612799,2.089512999133,1.23469281844766,0.398068533636986,0,0.51469581422943,0.284163499395593,0,0.469052119962192,0.180062061461015,0.23674473558521,0.787056926989615,0.462801338662135,0.232533944750408,0,0.233530684734339,0.329119699826961,0.492502392237286,0.729619285912702,0.877199924551994,0.219550115291051,0.671032093801859,5.04695876553905,0.514523061896422,0,0.528901133327089,0.426576501070468,0.232236671860439,0.257734922644187,0.201683524623343,0.22237804384487,0,0.949058123089023,0.329397909448022,0,0.596869416123452,0.38992817423824,0.898819408654221,0.432276099749388,0.398282546508734,0.379335801906163,0.799739588268102,1.1270773567308,1.83286195060783,1.93952487167626,2.59502533594179,4.86921335856781,6.6424566590821,5.02395929092399,2.96153193412321,0.296452627087149,1.50160595144485,0.786235980452812,1.12431056192427,0.608580364165509,0.72353147925725,1.01850340712568,0.575392274901621,0.972811360650212,0,4.31304619582064,1.11642284300551,1.87222603868736,0.505157755894224,1.79397413521912,0,5.17308932466493,0,0,0.339490171550376,0.234690248288502,1.00503754465089,0.952174563544055,0.585400943573396,2.99506773801763,1.7717175171902,2.39182152986231,3.93271955317771,4.31712454664739,3.90552458170081,0,0,1.96705709207614,1.65562047782839,5.77982123956051,10.6662634798905,0,53.0188947129183,1.26203287766503,1.1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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18761 | |||
|HGNC= | |||
|MCL_coexpression_id=40 | |||
|TSSclassifier=NA | |||
|UniProt=Q02111,A6H667,B1AYX8,Q8CAV6 | |||
|association_with_transcript=6bp_to_ENSMUST00000028118,NM_008859,uc008iia.1,uc008iib.1,uc008iic.1_5end | |||
|cluster_id=chr2:11094015..11094046,+ | |||
|description=CAGE_peak_2_at_Prkcq_5end | |||
|id=chr2:11094015..11094046,+ | |||
|ontology_enrichment_celltype=CL:0000791!2.51e-07!9;CL:0000789!2.51e-07!9;CL:0002420!2.51e-07!9;CL:0002419!2.51e-07!9;CL:0000790!2.51e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.16e-08,9;CL:0000789,2.16e-08,9;CL:0002420,2.16e-08,9;CL:0002419,2.16e-08,9;CL:0000790,2.16e-08,9;CL:0000624,1.33e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!3.08e-10!29;UBERON:0006562!4.94e-10!24;UBERON:0001557!4.94e-10!24;UBERON:0001042!4.94e-10!24;UBERON:0008814!4.94e-10!24;UBERON:0009145!4.94e-10!24;UBERON:0002370!2.28e-09!23;UBERON:0000974!2.28e-09!23;UBERON:0004807!2.28e-09!23;UBERON:0005058!2.28e-09!23;UBERON:0003351!2.28e-09!23;UBERON:0009113!2.28e-09!23;UBERON:0003295!2.28e-09!23;UBERON:0009722!2.28e-09!23;UBERON:0005562!2.28e-09!23;UBERON:0007690!2.28e-09!23;UBERON:0003408!5.31e-09!24;UBERON:0000072!2.83e-07!27;UBERON:0007811!5.68e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,7.25e-13,29;UBERON:0005057,7.25e-13,29;UBERON:0007811,7.69e-13,36;UBERON:0006562,1.05e-12,24;UBERON:0001557,1.05e-12,24;UBERON:0001042,1.05e-12,24;UBERON:0008814,1.05e-12,24;UBERON:0009145,1.05e-12,24;UBERON:0002370,6.70e-12,23;UBERON:0000974,6.70e-12,23;UBERON:0004807,6.70e-12,23;UBERON:0005058,6.70e-12,23;UBERON:0003351,6.70e-12,23;UBERON:0009113,6.70e-12,23;UBERON:0003295,6.70e-12,23;UBERON:0009722,6.70e-12,23;UBERON:0005562,6.70e-12,23;UBERON:0007690,6.70e-12,23;UBERON:0000077,2.86e-11,35;UBERON:0003408,5.49e-11,24;UBERON:0000153,2.74e-10,43;UBERON:0000072,3.93e-10,27;UBERON:0000065,2.24e-08,41;UBERON:0001004,6.64e-08,42;UBERON:0002390,3.15e-07,45;UBERON:0003061,3.15e-07,45;UBERON:0002193,6.10e-07,48;UBERON:0002405,6.10e-07,48 | |||
|phase1_expression=2.24208385946712,0,0,0,0,0,0,42.2233267653954,11.9670413828917,19.6614202110475,11.1291679346578,11.1681022593471,64.0290729942709,48.4309029401246,0.999329285446988,2.42970320867791,0.699561878128147,5.52058789376916,4.79900517620086,5.09267582157636,1.44573593256819,0,0,0.159992422793407,0,0,0,0.215471232685889,0.190023419456374,0,0.665191531965914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.777719596297134,0.55994568650145,2.87505128729943,0,37.7188313845899,31.9289109185341,0,0.286533439938757,0,0.404632921719196,0,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0,0,2.28520787523043,2.42955395046775,0,0.0958454710182364,0,2.20231761998777,3.19218345212969,3.5329502648936,0.131886287730194,0.182975287204819,0,2.51264699101243,1.12552522006336,3.0559649555362,2.65165726926301,3.41692033917847,0.559198337475902,0.605809546665472,2.72057616384428,4.34796733052517,0.860423876981386,0.679971333707751,0,0,0,18.117330196996,0,0,0,6.33795388995062,0,0,0,0,0,0,2.74041311325744,13.9826457169473,0.890652834388949,0,0.608930956624282,0.461230994512117,0.60289056221049,0.587943535678524,0.125666591329675,0,1.3013942122792,15.0383793831479,9.86777784679196,16.1214308476087,10.1823803158397,0,1.75668478206928,3.35114730901528,0.766371165625774,1.67741174308288,0,0.508280908292259,5.39246301857362,5.49000723382352,0.125654352112864,2.43354048269187,1.53429274398198,7.06479351502504,5.67844420737152,0.611036183101898,7.34001126599549,0.252722758433675,6.94458124425364,1.82168620147785,0.689706313300419,1.80062129805349,2.10986744970001,2.10913147369116,2.43416068541215,1.59292931751539,8.01980449290949,0.215567992932842,0.378212160335639,0,0.657587197282725,1.39023624612799,2.089512999133,1.23469281844766,0.398068533636986,0,0.51469581422943,0.284163499395593,0,0.469052119962192,0.180062061461015,0.23674473558521,0.787056926989615,0.462801338662135,0.232533944750408,0,0.233530684734339,0.329119699826961,0.492502392237286,0.729619285912702,0.877199924551994,0.219550115291051,0.671032093801859,5.04695876553905,0.514523061896422,0,0.528901133327089,0.426576501070468,0.232236671860439,0.257734922644187,0.201683524623343,0.22237804384487,0,0.949058123089023,0.329397909448022,0,0.596869416123452,0.38992817423824,0.898819408654221,0.432276099749388,0.398282546508734,0.379335801906163,0.799739588268102,1.1270773567308,1.83286195060783,1.93952487167626,2.59502533594179,4.86921335856781,6.6424566590821,5.02395929092399,2.96153193412321,0.296452627087149,1.50160595144485,0.786235980452812,1.12431056192427,0.608580364165509,0.72353147925725,1.01850340712568,0.575392274901621,0.972811360650212,0,4.31304619582064,1.11642284300551,1.87222603868736,0.505157755894224,1.79397413521912,0,5.17308932466493,0,0,0.339490171550376,0.234690248288502,1.00503754465089,0.952174563544055,0.585400943573396,2.99506773801763,1.7717175171902,2.39182152986231,3.93271955317771,4.31712454664739,3.90552458170081,0,0,1.96705709207614,1.65562047782839,5.77982123956051,10.6662634798905,0,53.0188947129183,1.26203287766503,1.17131623288992,0.646270193198397,0.477937595905104,0.668396022247182,0.849229592366497,0,1.16902343164525,0.395287777946524,2.24924921495265,0.141940085208269,0.534196811001766,0.325773918707152,0.494910368917606,0,0.242780636154981,0.302323556964751,0,0,0.614870295887855,0.516856586336442,0.727067458955011,1.06949213515416,0.948110273807448,0,0,5.10659408630682,0.900305470156551,0,0,0.354680467284547,0.535106452806212,0.164549020602121,0.608929898229199,1.40803024838226,0,0.882113592219848,7.74965388824956,2.42196640043858,2.29189114726992,2.26807453605959,2.62625439592098,0.874442509889552,7.97328798645192,3.58828849675491,1.03193433981611,2.03713980106683,2.63715839806567,3.8274383761887,4.57556346413045,4.07948231985253,6.57771825921193,5.2515990045681,0,0.474503990371703,0,0.324016022465404,0,0.218362563746178,0.539457385539283,0.578574190077352,1.04702376793612,0.777689839750757,0.621339313086926,0,0,0,0.194451188344048,0.516639293910924,0.168956125490778,0.117357238645754,0,0.209718688851422,0,5.18454011264158,24.3328562883697,5.47358081283443,5.95723551555998,7.14564526377873,9.667441566044,10.1327490938445,10.5771995577573,11.0767145380933,10.9043765943999,10.21171209177,13.4098826231998,17.2500448909362,16.5484367621367,17.88216603378,61.2172035761071,0,0,0,3.86379188064381,1.12609485270709,1.09890974560359,0.643105137237198,0,2.82375921308533,1.38097570952153,2.86447756719698,1.89038500578056,2.05524755931193,2.2661816921691,0.675022500231806,0.900642406448441,1.81256963593682,2.07104124700728,0.207574695168353,0.399024873401031,0.682934423016537,0.729320151204882,0.419226325255965,1.47074806760011,5.33392146723877,3.7086310303001,3.53011130550997,4.04315538822076,3.54871019846336,2.82939512079114,2.99652823903624,3.58540853467268,2.12511235135769,3.81034953026459,3.01299247456624,2.50781986602817,2.47251540481984,4.71036544430071,3.77156177623957,3.54951612318675,3.81497903915713,4.65108533223451,3.57615645578256,3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| |||
|short_description=p2@Prkcq | |||
}} |
Latest revision as of 23:03, 1 October 2015
Short description: | p2@Prkcq |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Prkcq_5end |
Coexpression cluster: | MCL_coexpression_mm9:40 |
Association with transcript: | 6bp_to_ENSMUST00000028118, NM_008859, uc008iia.1, uc008iib.1, uc008iic.1_5end |
EntrezGene: | Prkcq |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.16e-08 | 9 |
alpha-beta T cell | 2.16e-08 | 9 |
immature T cell | 2.16e-08 | 9 |
mature T cell | 2.16e-08 | 9 |
immature alpha-beta T cell | 2.16e-08 | 9 |
CD4-positive, alpha-beta T cell | 1.33e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 7.25e-13 | 29 |
immune organ | 7.25e-13 | 29 |
craniocervical region | 7.69e-13 | 36 |
pharynx | 1.05e-12 | 24 |
upper respiratory tract | 1.05e-12 | 24 |
chordate pharynx | 1.05e-12 | 24 |
pharyngeal arch system | 1.05e-12 | 24 |
pharyngeal region of foregut | 1.05e-12 | 24 |
thymus | 6.70e-12 | 23 |
neck | 6.70e-12 | 23 |
respiratory system epithelium | 6.70e-12 | 23 |
hemolymphoid system gland | 6.70e-12 | 23 |
pharyngeal epithelium | 6.70e-12 | 23 |
thymic region | 6.70e-12 | 23 |
pharyngeal gland | 6.70e-12 | 23 |
entire pharyngeal arch endoderm | 6.70e-12 | 23 |
thymus primordium | 6.70e-12 | 23 |
early pharyngeal endoderm | 6.70e-12 | 23 |
mixed endoderm/mesoderm-derived structure | 2.86e-11 | 35 |
gland of gut | 5.49e-11 | 24 |
anterior region of body | 2.74e-10 | 43 |
segment of respiratory tract | 3.93e-10 | 27 |
respiratory tract | 2.24e-08 | 41 |
respiratory system | 6.64e-08 | 42 |
hematopoietic system | 3.15e-07 | 45 |
blood island | 3.15e-07 | 45 |
hemolymphoid system | 6.10e-07 | 48 |
immune system | 6.10e-07 | 48 |