FFCP PHASE1:Hg19::chr7:107968921..107968937,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4897 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7994 | |||
|TSSclassifier=strong | |||
|UniProt=C9JF43 | |||
|association_with_transcript=0bp_to_ENST00000442580_5end | |||
|cluster_id=chr7:107968921..107968937,- | |||
|coexpression_cluster_id=C276 | |||
|description=CAGE_peak_9_at_NRCAM_5end | |||
|id=chr7:107968921..107968937,- | |||
|ontology_enrichment_celltype=CL:0000128!1.07e-16!7;CL:0000126!1.07e-16!7;CL:0000127!1.07e-16!7;CL:0002453!1.07e-16!7;CL:0002605!4.78e-11!3;CL:0002319!2.64e-08!25;CL:0000133!3.91e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002605;1.02e-37;3!CL:0000128;1.73e-28;7!CL:0000126;1.73e-28;7!CL:0000127;1.73e-28;7!CL:0000047;3.05e-25;2!CL:0002319;4.37e-16;25!CL:0000243;6.28e-12;15!CL:0000125;6.28e-12;15!CL:0000095;1.06e-10;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,1.08e-37,3;CL:0000128,1.61e-28,7;CL:0000126,1.61e-28,7;CL:0000127,1.61e-28,7;CL:0002453,1.61e-28,7;CL:0002319,4.49e-16,25;CL:0000243,6.11e-12,15;CL:0000125,6.11e-12,15;CL:0000030,6.11e-12,15;CL:0000339,6.11e-12,15;CL:0000095,1.04e-10,17;CL:0000123,1.04e-10,17;CL:0000047,5.46e-07,8;CL:0000133,6.25e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.70e-38;3!CL:0000339;6.28e-12;15!CL:0000133;8.39e-07;59 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0050619;6.24e-14;1!DOID:1357;6.24e-14;1!DOID:4960;1.33e-13;1!DOID:0070004;1.33e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,5.85e-14,1;DOID:1357,5.85e-14,1;DOID:4960,1.42e-13,1;DOID:0070004,1.42e-13,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.22e-59!57;UBERON:0005068!2.22e-59!57;UBERON:0006241!2.22e-59!57;UBERON:0007135!2.22e-59!57;UBERON:0001017!1.13e-54!82;UBERON:0002616!1.34e-53!59;UBERON:0005743!1.07e-51!86;UBERON:0000955!6.07e-50!69;UBERON:0006238!6.07e-50!69;UBERON:0003075!1.97e-46!86;UBERON:0007284!1.97e-46!86;UBERON:0000073!6.79e-46!94;UBERON:0001016!6.79e-46!94;UBERON:0002346!6.20e-44!90;UBERON:0002780!1.66e-38!41;UBERON:0001890!1.66e-38!41;UBERON:0006240!1.66e-38!41;UBERON:0003080!1.87e-37!42;UBERON:0002020!1.50e-32!34;UBERON:0003528!1.50e-32!34;UBERON:0001893!2.55e-32!34;UBERON:0001869!2.47e-31!32;UBERON:0000033!2.72e-31!123;UBERON:0003056!4.56e-31!61;UBERON:0002791!2.99e-30!33;UBERON:0000153!2.23e-29!129;UBERON:0007811!2.23e-29!129;UBERON:0000956!4.49e-26!25;UBERON:0000203!4.49e-26!25;UBERON:0004121!1.88e-25!169;UBERON:0000924!1.28e-24!173;UBERON:0006601!1.28e-24!173;UBERON:0004733!1.81e-24!12;UBERON:0002028!1.81e-24!12;UBERON:0007277!1.81e-24!12;UBERON:0003076!3.08e-23!15;UBERON:0003057!3.08e-23!15;UBERON:0004732!2.02e-22!13;UBERON:0007023!1.10e-21!115;UBERON:0002680!2.20e-21!9;UBERON:0001895!2.20e-21!9;UBERON:0010092!2.20e-21!9;UBERON:0002619!8.57e-19!22;UBERON:0001950!1.22e-17!20;UBERON:0002037!7.75e-14!6;UBERON:0006215!7.75e-14!6;UBERON:0000025!3.62e-13!194;UBERON:0000200!1.72e-12!6;UBERON:0002771!8.30e-10!3;UBERON:0000988!2.62e-09!3;UBERON:0002298!3.53e-09!8;UBERON:0000064!5.15e-09!219;UBERON:0004111!7.19e-09!241;UBERON:0000483!1.59e-08!309;UBERON:0000119!2.39e-08!312;UBERON:0002308!5.86e-08!9;UBERON:0000125!5.86e-08!9;UBERON:0001894!1.64e-07!7;UBERON:0006222!1.64e-07!7;UBERON:0000477!2.60e-07!286;UBERON:0001897!2.85e-07!2;UBERON:0000369!3.99e-07!4;UBERON:0002435!3.99e-07!4;UBERON:0000204!3.99e-07!4;UBERON:0010082!3.99e-07!4;UBERON:0002148!7.22e-07!2;UBERON:0009662!7.22e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.61e-19;6!UBERON:0001764;6.24e-14;1!UBERON:0001825;6.24e-14;1!UBERON:0002680;3.17e-13;9!UBERON:0001895;3.17e-13;9!UBERON:0004733;4.62e-10;12!UBERON:0002028;4.62e-10;12!UBERON:0004732;2.50e-09;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.61e-19,6;UBERON:0006215,1.61e-19,6;UBERON:0001764,5.85e-14,1;UBERON:0001825,5.85e-14,1;UBERON:0002680,3.17e-13,9;UBERON:0001895,3.17e-13,9;UBERON:0010092,3.17e-13,9;UBERON:0001017,4.43e-11,81;UBERON:0004733,4.62e-10,12;UBERON:0002028,4.62e-10,12;UBERON:0007277,4.62e-10,12;UBERON:0001016,6.79e-10,89;UBERON:0004732,2.50e-09,13;UBERON:0000955,3.73e-08,68;UBERON:0006238,3.73e-08,68;UBERON:0003076,3.74e-08,15;UBERON:0003057,3.74e-08,15;UBERON:0000073,5.17e-08,53;UBERON:0002616,5.17e-08,53;UBERON:0001049,1.43e-07,56;UBERON:0005068,1.43e-07,56;UBERON:0006241,1.43e-07,56;UBERON:0007135,1.43e-07,56;UBERON:0003075,8.62e-07,82;UBERON:0007284,8.62e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0,0.313454721478088,5.43848375549008,4.10623275218653,2.76193807108566,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472674085820339,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348581828608555,0.621966330092223,0.504641701751257,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,4.17349457910277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03275699377971,1.30139853857622,0,0.670065061337395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.562677665642051,0,0,0,0,0,0,2.86352311006033,0,0,0,0,0,0,0,0,0,0.556608588971108,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,3.05163472634166,11.1685052530537,7.97978571174578,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.652931232636591,0,0,0,0,0,0,0,0,0.067401132980677,0,0.702793337176017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677942222341597,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,5.65394746500843,0,0.366078794705889,0.250381861413,0,0.887432412294818,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.9119402268045,0,0,0.276516872303462,0,0,0,0,0,0,0,0,2.2387947355906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0.159633859057151,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0.535701835878287,0,0,0,0,0,0,0.0679697329768317,0.460409414939944,0,0,0,0.157115589916002,0.280272163313789,0,0,0,0,0,0.23248285073625,0,0,0,0,0,0,0,0,0,0,0,0,0.335566295393377,0,0,0,0,0,0,0,0,0,17.2807505519609,0,0,0,0.437119121007915,0,0,0,0.392616934229891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,6.99299660567651,0,0,1.60330443159336,0,0,0,0,0.829169439458779,0.20686599172379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | |||
|short_description=p9@NRCAM | |||
}} |
Latest revision as of 02:44, 25 September 2015
Short description: | p9@NRCAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_NRCAM_5end |
Coexpression cluster: | C276_mesothelioma_kidney_renal_small_clear_cerebellum_Renal |
Association with transcript: | 0bp_to_ENST00000442580_5end |
EntrezGene: | NRCAM |
HGNC: | 7994 |
UniProt: | C9JF43 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 1.08e-37 | 3 |
oligodendrocyte | 1.61e-28 | 7 |
macroglial cell | 1.61e-28 | 7 |
astrocyte | 1.61e-28 | 7 |
oligodendrocyte precursor cell | 1.61e-28 | 7 |
neural cell | 4.49e-16 | 25 |
glial cell (sensu Vertebrata) | 6.11e-12 | 15 |
glial cell | 6.11e-12 | 15 |
glioblast | 6.11e-12 | 15 |
glioblast (sensu Vertebrata) | 6.11e-12 | 15 |
neuron associated cell | 1.04e-10 | 17 |
neuron associated cell (sensu Vertebrata) | 1.04e-10 | 17 |
neuronal stem cell | 5.46e-07 | 8 |
neurectodermal cell | 6.25e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.61e-19 | 6 |
rhombic lip | 1.61e-19 | 6 |
maxillary sinus | 5.85e-14 | 1 |
paranasal sinus | 5.85e-14 | 1 |
regional part of metencephalon | 3.17e-13 | 9 |
metencephalon | 3.17e-13 | 9 |
future metencephalon | 3.17e-13 | 9 |
central nervous system | 4.43e-11 | 81 |
segmental subdivision of hindbrain | 4.62e-10 | 12 |
hindbrain | 4.62e-10 | 12 |
presumptive hindbrain | 4.62e-10 | 12 |
nervous system | 6.79e-10 | 89 |
segmental subdivision of nervous system | 2.50e-09 | 13 |
brain | 3.73e-08 | 68 |
future brain | 3.73e-08 | 68 |
posterior neural tube | 3.74e-08 | 15 |
chordal neural plate | 3.74e-08 | 15 |
regional part of nervous system | 5.17e-08 | 53 |
regional part of brain | 5.17e-08 | 53 |
neural tube | 1.43e-07 | 56 |
neural rod | 1.43e-07 | 56 |
future spinal cord | 1.43e-07 | 56 |
neural keel | 1.43e-07 | 56 |
neural plate | 8.62e-07 | 82 |
presumptive neural plate | 8.62e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 5.85e-14 | 1 |
maxillary sinus cancer | 5.85e-14 | 1 |
bone marrow cancer | 1.42e-13 | 1 |
myeloma | 1.42e-13 | 1 |