FFCP PHASE1:Hg19::chr7:129142360..129142412,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100287482 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=40bp_to_ENST00000462322,NM_001195243,uc003voy.2_5end | |||
|cluster_id=chr7:129142360..129142412,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_1_at_LOC100287482_5end | |||
|id=chr7:129142360..129142412,+ | |||
|ontology_enrichment_celltype=CL:0000791!9.35e-07!18;CL:0000789!9.35e-07!18;CL:0002420!9.35e-07!18;CL:0002419!9.35e-07!18;CL:0000790!9.35e-07!18 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,9.91e-07,11 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.10e-07;29 | |||
|ontology_enrichment_disease=DOID:0050687!8.19e-19!143;DOID:14566!2.12e-16!239;DOID:162!2.03e-15!235;DOID:305!2.03e-14!106 | |||
|ontology_enrichment_disease_v019=DOID:0050615;9.78e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,3.62e-19,143;DOID:14566,1.29e-15,239;DOID:162,2.89e-14,235;DOID:305,3.12e-13,106 | |||
|ontology_enrichment_uberon=UBERON:0001869!1.77e-13!32;UBERON:0001049!5.80e-13!57;UBERON:0005068!5.80e-13!57;UBERON:0006241!5.80e-13!57;UBERON:0007135!5.80e-13!57;UBERON:0002020!9.11e-13!34;UBERON:0003528!9.11e-13!34;UBERON:0002780!1.41e-12!41;UBERON:0001890!1.41e-12!41;UBERON:0006240!1.41e-12!41;UBERON:0001893!2.03e-12!34;UBERON:0000073!3.88e-12!94;UBERON:0001016!3.88e-12!94;UBERON:0002619!4.90e-12!22;UBERON:0002791!6.96e-12!33;UBERON:0002346!8.15e-12!90;UBERON:0003080!8.43e-12!42;UBERON:0001950!6.28e-11!20;UBERON:0005743!7.27e-11!86;UBERON:0003075!1.63e-10!86;UBERON:0007284!1.63e-10!86;UBERON:0001017!1.76e-10!82;UBERON:0000955!2.48e-10!69;UBERON:0006238!2.48e-10!69;UBERON:0000956!4.06e-10!25;UBERON:0000203!4.06e-10!25;UBERON:0002616!1.94e-09!59;UBERON:0003056!6.07e-09!61;UBERON:0007023!1.16e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;9.15e-17;22!UBERON:0001869;2.52e-16;32!UBERON:0003528;1.71e-15;34!UBERON:0002020;1.71e-15;34!UBERON:0001950;3.37e-15;20!UBERON:0002791;4.39e-15;32!UBERON:0001893;1.65e-14;34!UBERON:0000956;8.89e-14;25!UBERON:0000203;8.89e-14;25!UBERON:0002780;3.60e-13;41!UBERON:0001890;3.60e-13;41!UBERON:0000073;5.55e-10;53!UBERON:0002616;5.55e-10;53!UBERON:0000955;1.38e-08;68!UBERON:0001016;1.43e-07;83!UBERON:0001017;3.42e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.25e-18,32;UBERON:0003528,4.57e-18,34;UBERON:0002020,4.57e-18,34;UBERON:0002780,6.29e-18,41;UBERON:0001890,6.29e-18,41;UBERON:0003080,6.29e-18,41;UBERON:0006240,6.29e-18,41;UBERON:0001049,2.13e-17,56;UBERON:0005068,2.13e-17,56;UBERON:0006241,2.13e-17,56;UBERON:0007135,2.13e-17,56;UBERON:0000073,3.96e-17,53;UBERON:0002616,3.96e-17,53;UBERON:0002791,5.87e-17,32;UBERON:0002619,7.06e-17,22;UBERON:0001893,7.10e-17,34;UBERON:0001016,8.37e-17,89;UBERON:0000955,7.98e-16,68;UBERON:0006238,7.98e-16,68;UBERON:0001950,2.62e-15,20;UBERON:0001017,1.35e-14,81;UBERON:0000956,7.10e-14,25;UBERON:0000203,7.10e-14,25;UBERON:0002346,4.38e-13,86;UBERON:0003056,3.09e-12,61;UBERON:0003075,2.24e-11,82;UBERON:0007284,2.24e-11,82;UBERON:0011216,1.47e-08,223;UBERON:0007023,1.68e-07,114;UBERON:0010371,3.48e-07,104 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0.697801167972428,0,0,0.247532705920093,0,1.34465029290355,0.602694528023977,0,0.975865597581014,0.246242116153576,0,0.313454721478088,0.286235987131057,0.273748850145768,0,0.382067028739756,0.246301768349837,0.393553906568396,1.57345710739562,3.0706351847777,0.77408061658038,0,0.90361775633475,0.369754010166788,0,0,3.22960483268332,0,0.401088894940283,0.651032612147555,0,0.32389366601898,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,3.51992488922645,1.09227722252426,0.889509253863555,0.853460445133014,1.20118796110804,1.72425731986345,1.32208974556972,0.954053754535364,1.1384259382189,2.93618594685469,0.764546456250458,0,1.68152568894461,1.31692042387539,0.786839080455332,1.57204305099666,1.23360899399706,0.83593247695339,1.30368906653436,0.946895611469467,0,2.89667187901451,0.589211814949674,0.443067789167242,0,2.0494611156108,2.21100890851793,2.79544437826249,4.14525026678773,1.44901542867526,1.4828656316206,1.87278579662799,0,1.69964014046349,0.766440987203842,1.03088233644789,0.253019692019503,0.95569624297229,3.25541726928209,2.85135613334512,4.51725357233318,2.55973222308837,2.49861453104692,2.36777252044017,4.10563998460523,2.82249440514625,5.88368430723716,3.04131248153878,0,0,0.12786256184353,0.722878304769133,0.50133791063589,1.30361867064741,0.795285947051099,0.973269740605272,0.567208902984407,0,0.43917392846563,34.4474968558984,0.728590576585084,0,0.97364218096405,0,0.132957960518865,0,0,0,0.596287222100115,0,0.347140501607594,0.56530794192401,0.419499436209906,0,0,0.258416759169329,0,0,0,0.760272105718513,0.24406205754817,0.367663080345869,0,0.535798369704479,0,0.225222960966644,0,0,0.366403487860815,0,0,1.3082821564276,0,0.379891534993739,0.132409180813219,0.286836620748814,0,0.560677600142307,0,0,0,0,0,0,0,0.234321431833797,0,0,0.298897361103602,0,0.161872944368132,0.280901613404497,0.408308342509787,0.368502951935304,0.103325781175765,1.18800285728205,0.741800787835671,0,0,0,0.125118519871964,0.554128230968366,0.877955241761676,0,0.150238058906597,0,0.179389635688862,0.213557388818567,0.211931901159562,0,0.206105058476878,0,0,0,0.0974370051611986,0,0.276149695926898,0.323292113637624,0,0,0,0,0.545492241181669,0.286804595389004,0.121973706129595,0,0,0.932949495138334,0.252320850875628,0.36497735907583,0,0.643240938192885,0,0,0.721879481669586,1.41968160047813,1.85443159085912,2.6511213287183,1.32352767278873,0.871517776369625,1.18635309555548,1.21348177344148,1.37355025587742,1.15424147083917,0,0,0.8231480226628,0,0,0,0,0.441463099414651,0,0.171567810298526,0.219500570817251,0,0.904760751704678,0.277765335475589,1.62904152655162,1.03993478527958,0,0.579652024875384,0,0.288732895522148,0,0,3.95102198979638,0.858486162094873,0,0,0,0,0,0.283550194484773,0.0895585227028483,1.16253575405585,0,0.492663237895943,3.78608266256872,1.4512968087854,0.720599767084807,1.00993946741104,0,0.381988425558278,0,0,0.102827492703324,0.300343057843917,0,0.112131084345361,0,0.1466765716419,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0.602878754119172,0,0.799783929456456,0,0,0,0.239624855491583,0,2.85273810081437,0,0,0.537182889719687,6.164682919644,2.95546140302891,6.03757209606648,4.74869234235069,0,0,2.31986643833309,1.67516265334349,0.637938751653163,0,0,0,0.12269149171914,0,0.542530047399471,0.207970861530807,0.892144943985809,1.57702415033935,1.05427273493442,0.300946099727719,0,0,0,0.368738337083406,0.0868836144680828,0,0,0.620304078368662,1.07857100409308,1.81436848265855,0,1.66435439510497,0,0,0,0,0,0,0,0,0.154209693802656,0.710246901252508,1.14978018419333,0,0.232420756919918,0.120859449591622,0,1.56537681191024,0.68888668898764,0.910455840033585,0.262248829918848,0.902399225814824,0.462092022626489,0,0,0.633309773357254,0,0,0.431831832204279,0,0.541892875087706,0.501689773854853,0.509752546090077,0,0.447749509444357,0,0,0.512900250232778,1.96808787419823,2.60302715731442,0.412164046590889,2.01452822600355,1.40266149865,0,0,1.6068392984416,1.25671933779759,0.154048617114644,0,0,0.107420244868274,0,0.0852266274161009,0.267096106940212,0,0.192190067365106,0.255225424989168,0.30347334256665,0,0,0,0.616067160352178,0,0.869932992075073,0,0.286249773483982,0,0,0,0,0.42793898803392,0.318203247925937,0,0,0,0.117812402345686,0,0,0,0.48763373908959,0.731140468893853,0,0,0.282810863907425,1.13008116620243,0,0.66343897524122,0.438450885253763,0,0,0,0.6196469961995,0,0,0.0982490410131212,0,0.354761064070598,1.68886108238131,1.64647446479951,0,0,0.0962221127255121,2.01090682660736,0,0.564862804660675,0,0,0.443430153536676,0,1.01489521846434,3.0585488285695,1.70894156152249,0.476463550915578,1.64544909234478,1.29694662238543,0.540031437238115,2.37937552888281,1.81600920916704,3.84991942105343,1.22520107990516,0.371606350251437,0.144269212976445,0,2.07254154547469,0.399158742865633,1.1490322207942,0,0.649243880549111,0.842391534340376,0,0,0,0.169291777801603,1.1241165257259,1.81619736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| |||
|short_description=p1@LOC100287482 | |||
}} |
Latest revision as of 05:44, 16 September 2015
Short description: | p1@LOC100287482 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC100287482_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 40bp_to_ENST00000462322, NM_001195243, uc003voy.2_5end |
EntrezGene: | LOC100287482 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 9.91e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
cerebral hemisphere | 1.25e-18 | 32 |
brain grey matter | 4.57e-18 | 34 |
gray matter | 4.57e-18 | 34 |
regional part of forebrain | 6.29e-18 | 41 |
forebrain | 6.29e-18 | 41 |
anterior neural tube | 6.29e-18 | 41 |
future forebrain | 6.29e-18 | 41 |
neural tube | 2.13e-17 | 56 |
neural rod | 2.13e-17 | 56 |
future spinal cord | 2.13e-17 | 56 |
neural keel | 2.13e-17 | 56 |
regional part of nervous system | 3.96e-17 | 53 |
regional part of brain | 3.96e-17 | 53 |
regional part of telencephalon | 5.87e-17 | 32 |
regional part of cerebral cortex | 7.06e-17 | 22 |
telencephalon | 7.10e-17 | 34 |
nervous system | 8.37e-17 | 89 |
brain | 7.98e-16 | 68 |
future brain | 7.98e-16 | 68 |
neocortex | 2.62e-15 | 20 |
central nervous system | 1.35e-14 | 81 |
cerebral cortex | 7.10e-14 | 25 |
pallium | 7.10e-14 | 25 |
neurectoderm | 4.38e-13 | 86 |
pre-chordal neural plate | 3.09e-12 | 61 |
neural plate | 2.24e-11 | 82 |
presumptive neural plate | 2.24e-11 | 82 |
organ system subdivision | 1.47e-08 | 223 |
adult organism | 1.68e-07 | 114 |
ecto-epithelium | 3.48e-07 | 104 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 3.62e-19 | 143 |
disease of cellular proliferation | 1.29e-15 | 239 |
cancer | 2.89e-14 | 235 |
carcinoma | 3.12e-13 | 106 |