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FFCP PHASE1:Mm9::chr2:29643841..29643855,+: Difference between revisions

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{{FFCP|EntrezGene=227683|HGNC=|MCL_coexpression_id=789|UniProt=|association_with_transcript=58bp_to_uc008jad.1,uc012bti.1_5end|description=CAGE_peak_2_at_Coq4_5end|id=chr2:29643841..29643855,+|ontology_enrichment_celltype=CL:0002319!9.28e-08!43;CL:0000221!1.09e-07!44;CL:0000133!1.09e-07!44|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.51e-15!73;UBERON:0005743!2.51e-15!73;UBERON:0000073!4.66e-15!75;UBERON:0001016!4.66e-15!75;UBERON:0004121!4.49e-13!102;UBERON:0000924!4.49e-13!102;UBERON:0006601!4.49e-13!102;UBERON:0001049!6.98e-12!52;UBERON:0005068!6.98e-12!52;UBERON:0006241!6.98e-12!52;UBERON:0007135!6.98e-12!52;UBERON:0002346!1.03e-11!71;UBERON:0003075!1.03e-11!71;UBERON:0007284!1.03e-11!71;UBERON:0003056!1.21e-10!49;UBERON:0003080!1.22e-10!40;UBERON:0002780!2.33e-10!39;UBERON:0001890!2.33e-10!39;UBERON:0006240!2.33e-10!39;UBERON:0002020!3.02e-10!34;UBERON:0000955!4.63e-10!50;UBERON:0006238!4.63e-10!50;UBERON:0002616!6.98e-10!49;UBERON:0000033!2.58e-09!63;UBERON:0002791!1.51e-08!29;UBERON:0003528!1.51e-08!29;UBERON:0001893!1.51e-08!29;UBERON:0002619!8.58e-08!17;UBERON:0000956!1.33e-07!21;UBERON:0001869!1.33e-07!21;UBERON:0000203!1.33e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.99e-12,73;UBERON:0001016,1.42e-11,75;UBERON:0010371,1.93e-10,73;UBERON:0004121,2.05e-10,95;UBERON:0000924,2.05e-10,95;UBERON:0006601,2.05e-10,95;UBERON:0001049,2.47e-10,52;UBERON:0005068,2.47e-10,52;UBERON:0006241,2.47e-10,52;UBERON:0007135,2.47e-10,52;UBERON:0002020,3.20e-10,34;UBERON:0002021,8.99e-10,10;UBERON:0000411,8.99e-10,10;UBERON:0001950,8.99e-10,10;UBERON:0003080,9.50e-10,40;UBERON:0000073,1.55e-09,54;UBERON:0000160,1.71e-09,31;UBERON:0002780,2.38e-09,39;UBERON:0001890,2.38e-09,39;UBERON:0006240,2.38e-09,39;UBERON:0002346,2.66e-09,64;UBERON:0003075,2.66e-09,64;UBERON:0007284,2.66e-09,64;UBERON:0002619,6.19e-09,17;UBERON:0003528,2.40e-08,29;UBERON:0002791,2.40e-08,29;UBERON:0001893,2.40e-08,29;UBERON:0002616,3.43e-08,46;UBERON:0003056,5.01e-08,49;UBERON:0000955,7.55e-08,47;UBERON:0006238,7.55e-08,47;UBERON:0000956,1.56e-07,21;UBERON:0001869,1.56e-07,21;UBERON:0000203,1.56e-07,21|phase1_expression=1.60148847104794,4.88565570695105,7.27998783023258,19.3577095236371,9.5170188689806,0.671517087647559,2.10251376535973,0.258246646883153,0.563154888606667,1.87251621057595,0,0.239316476986009,0,0,0,0.607425802169478,0,0,0.548457734422955,0,2.8064285749853,0.198581902401771,0.522399578277871,2.3998863419011,2.75291137280604,1.72269589234506,3.4460959692726,2.15471232685889,2.66032787238923,2.01624103807945,0.886922042621219,1.27006134691926,1.23012957516914,0,0.288851619751275,0.332469290716985,0.204169356262369,3.76678467663217,3.1253413780952,4.71171369576418,15.8822501768374,10.9287277593351,7.76816564849846,0.125896817975577,0.101376931219515,0.183546752161682,0.782391344348039,1.52617609466313,1.75748946187577,0.972149495371417,1.95980990275508,7.18762821824858,0,0.725362142011344,0,0.771778308107841,0.573066879877513,0,1.01158230429799,2.64495489636016,2.53532561402472,0.338844532069132,0.889294796111139,0,0,0,3.59520132622086,7.30014780110954,0.518448061542388,0.945041568321835,0.420649922702764,2.28520787523043,2.65042249141936,1.22490799214954,0.958454710182364,1.83843757322004,1.10115880999389,0.638436690425939,0.46081959976873,1.45074916503213,1.46380229763855,1.56274011167028,0.279182999001381,1.68828783009504,2.59757021220577,3.24091444021034,1.70846016958924,0.745597783301202,0.302904773332736,0.68014404096107,0.579728977403356,0.860423876981386,0,0,0,0,0.842666520790511,0,0.259786004602869,0,0.563373679106722,1.28326477414318,0,0,0.216491041011214,0,1.51657333504435,0.91347103775248,0.517875767294343,0.29688427812965,0.693941307064543,0.304465478312141,0.461230994512117,0.150722640552623,0.470354828542819,1.0053327306374,0,0.144599356919912,0,0.161766849947409,0.441683036920787,0,0,0.292780797011547,0.41889341362691,2.55457055208591,0,0,0,1.3481157546434,0.457500602818626,0.879580464790051,2.25971616249959,3.06858548796397,1.66230435647648,1.62241263067758,0.712875546952214,0.248813941220186,0.505445516867349,3.78795340595653,1.17108398666433,0.459804208866946,0.720248519221397,0.753524089178575,0.612328492361951,0.2562274405697,0.562210347358373,0.776110112217047,0.215567992932842,0.756424320671277,0.351902248327898,0.657587197282725,0.278047249225598,0.348252166522167,0.205782136407943,0.59710280045548,0,0.257347907114715,0,0.621377317606506,0,0,0,0,0,0.232533944750408,0,0.116765342367169,0.16455984991348,0.164167464079095,0,0,0.219550115291051,0,2.73376933133365,0.514523061896422,17.8426142811251,8.19796756656987,0.853153002140936,0.464473343720877,0.38660238396628,2.01683524623343,1.77902435075896,3.04361001780095,4.2707615539006,1.81168850196412,1.00534083520108,1.98956472041151,2.53453313254856,0.898819408654221,2.59365659849633,2.98711909881551,0.948339504765408,0.571242563048644,1.1270773567308,0,0.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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=227683
|HGNC=
|MCL_coexpression_id=789
|TSSclassifier=NA
|UniProt=
|association_with_transcript=58bp_to_uc008jad.1,uc012bti.1_5end
|cluster_id=chr2:29643841..29643855,+
|description=CAGE_peak_2_at_Coq4_5end
|id=chr2:29643841..29643855,+
|ontology_enrichment_celltype=CL:0002319!9.28e-08!43;CL:0000221!1.09e-07!44;CL:0000133!1.09e-07!44
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!2.51e-15!73;UBERON:0005743!2.51e-15!73;UBERON:0000073!4.66e-15!75;UBERON:0001016!4.66e-15!75;UBERON:0004121!4.49e-13!102;UBERON:0000924!4.49e-13!102;UBERON:0006601!4.49e-13!102;UBERON:0001049!6.98e-12!52;UBERON:0005068!6.98e-12!52;UBERON:0006241!6.98e-12!52;UBERON:0007135!6.98e-12!52;UBERON:0002346!1.03e-11!71;UBERON:0003075!1.03e-11!71;UBERON:0007284!1.03e-11!71;UBERON:0003056!1.21e-10!49;UBERON:0003080!1.22e-10!40;UBERON:0002780!2.33e-10!39;UBERON:0001890!2.33e-10!39;UBERON:0006240!2.33e-10!39;UBERON:0002020!3.02e-10!34;UBERON:0000955!4.63e-10!50;UBERON:0006238!4.63e-10!50;UBERON:0002616!6.98e-10!49;UBERON:0000033!2.58e-09!63;UBERON:0002791!1.51e-08!29;UBERON:0003528!1.51e-08!29;UBERON:0001893!1.51e-08!29;UBERON:0002619!8.58e-08!17;UBERON:0000956!1.33e-07!21;UBERON:0001869!1.33e-07!21;UBERON:0000203!1.33e-07!21
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.99e-12,73;UBERON:0001016,1.42e-11,75;UBERON:0010371,1.93e-10,73;UBERON:0004121,2.05e-10,95;UBERON:0000924,2.05e-10,95;UBERON:0006601,2.05e-10,95;UBERON:0001049,2.47e-10,52;UBERON:0005068,2.47e-10,52;UBERON:0006241,2.47e-10,52;UBERON:0007135,2.47e-10,52;UBERON:0002020,3.20e-10,34;UBERON:0002021,8.99e-10,10;UBERON:0000411,8.99e-10,10;UBERON:0001950,8.99e-10,10;UBERON:0003080,9.50e-10,40;UBERON:0000073,1.55e-09,54;UBERON:0000160,1.71e-09,31;UBERON:0002780,2.38e-09,39;UBERON:0001890,2.38e-09,39;UBERON:0006240,2.38e-09,39;UBERON:0002346,2.66e-09,64;UBERON:0003075,2.66e-09,64;UBERON:0007284,2.66e-09,64;UBERON:0002619,6.19e-09,17;UBERON:0003528,2.40e-08,29;UBERON:0002791,2.40e-08,29;UBERON:0001893,2.40e-08,29;UBERON:0002616,3.43e-08,46;UBERON:0003056,5.01e-08,49;UBERON:0000955,7.55e-08,47;UBERON:0006238,7.55e-08,47;UBERON:0000956,1.56e-07,21;UBERON:0001869,1.56e-07,21;UBERON:0000203,1.56e-07,21
|phase1_expression=1.60148847104794,4.88565570695105,7.27998783023258,19.3577095236371,9.5170188689806,0.671517087647559,2.10251376535973,0.258246646883153,0.563154888606667,1.87251621057595,0,0.239316476986009,0,0,0,0.607425802169478,0,0,0.548457734422955,0,2.8064285749853,0.198581902401771,0.522399578277871,2.3998863419011,2.75291137280604,1.72269589234506,3.4460959692726,2.15471232685889,2.66032787238923,2.01624103807945,0.886922042621219,1.27006134691926,1.23012957516914,0,0.288851619751275,0.332469290716985,0.204169356262369,3.76678467663217,3.1253413780952,4.71171369576418,15.8822501768374,10.9287277593351,7.76816564849846,0.125896817975577,0.101376931219515,0.183546752161682,0.782391344348039,1.52617609466313,1.75748946187577,0.972149495371417,1.95980990275508,7.18762821824858,0,0.725362142011344,0,0.771778308107841,0.573066879877513,0,1.01158230429799,2.64495489636016,2.53532561402472,0.338844532069132,0.889294796111139,0,0,0,3.59520132622086,7.30014780110954,0.518448061542388,0.945041568321835,0.420649922702764,2.28520787523043,2.65042249141936,1.22490799214954,0.958454710182364,1.83843757322004,1.10115880999389,0.638436690425939,0.46081959976873,1.45074916503213,1.46380229763855,1.56274011167028,0.279182999001381,1.68828783009504,2.59757021220577,3.24091444021034,1.70846016958924,0.745597783301202,0.302904773332736,0.68014404096107,0.579728977403356,0.860423876981386,0,0,0,0,0.842666520790511,0,0.259786004602869,0,0.563373679106722,1.28326477414318,0,0,0.216491041011214,0,1.51657333504435,0.91347103775248,0.517875767294343,0.29688427812965,0.693941307064543,0.304465478312141,0.461230994512117,0.150722640552623,0.470354828542819,1.0053327306374,0,0.144599356919912,0,0.161766849947409,0.441683036920787,0,0,0.292780797011547,0.41889341362691,2.55457055208591,0,0,0,1.3481157546434,0.457500602818626,0.879580464790051,2.25971616249959,3.06858548796397,1.66230435647648,1.62241263067758,0.712875546952214,0.248813941220186,0.505445516867349,3.78795340595653,1.17108398666433,0.459804208866946,0.720248519221397,0.753524089178575,0.612328492361951,0.2562274405697,0.562210347358373,0.776110112217047,0.215567992932842,0.756424320671277,0.351902248327898,0.657587197282725,0.278047249225598,0.348252166522167,0.205782136407943,0.59710280045548,0,0.257347907114715,0,0.621377317606506,0,0,0,0,0,0.232533944750408,0,0.116765342367169,0.16455984991348,0.164167464079095,0,0,0.219550115291051,0,2.73376933133365,0.514523061896422,17.8426142811251,8.19796756656987,0.853153002140936,0.464473343720877,0.38660238396628,2.01683524623343,1.77902435075896,3.04361001780095,4.2707615539006,1.81168850196412,1.00534083520108,1.98956472041151,2.53453313254856,0.898819408654221,2.59365659849633,2.98711909881551,0.948339504765408,0.571242563048644,1.1270773567308,0,0.193952487167626,0.49095073923223,0.189709611372772,0.590440591918409,0.31399745568275,0.370191491765402,0.296452627087149,0.166845105716094,0.196558995113203,0.224862112384854,0,0.241177159752417,0,0,0.324270453550071,0,0,0,0,0,0.358794827043824,0.482443521363367,0.184753190166605,0.37898282354097,0.651859905768103,0.848725428875941,0.469380496577004,0.837531287209079,1.42826184531608,0.390267295715598,0,0.221464689648775,0.159454768657487,0.327726629431476,0.345369963731791,0.433947175744535,0,0.54390568381871,0,0.275936746304732,0.642202359951168,0.234423373184406,0.819674726883377,0,0.94652465824877,1.95219372148319,1.07711698866399,0.477937595905104,0.668396022247182,0.849229592366497,0.809621403349789,0.292255857911312,0,0.963963949265421,0.283880170416537,1.06839362200353,0.651547837414304,0.494910368917606,1.32745138339963,0.485561272309963,0.302323556964751,0.188605079755898,0.295301892880773,0.307435147943927,0,0.727067458955011,0,0,3.16255825724996,0,1.36175842301515,0.540183282093931,0.646793418913773,0.643011105094777,3.01478397191865,1.60531935841864,0.822745103010605,1.522324745573,0,0.63549621259146,0.220528398054962,1.15420377059036,1.13025098687134,1.08563264870681,1.3130957840345,1.31312719796049,5.82961673259701,1.29797711407357,0,0.206386867963223,0.555583582109135,0.188368457004691,0,0.228778173206523,0.169978429993855,0.139951452323658,0.138199973804424,0.954670618015114,0.316335993581135,0.203319467126849,0.216010681643603,1.04544148007234,0,0.674321731924103,0.247960367176008,0.523511883968059,1.42576470620972,0,14.6560164057889,0.598066184175915,0.66183396182839,0.777804753376191,0.904118764344118,0.337912250981556,0.58678619322877,0.5208175393758,0.838874755405687,6.28118714147616,6.04863013141517,0,0,0.102710957164827,0.129920822977795,0,0,0,0.147689527174577,0.100966449948148,0,0,0.0974578807397524,0.288635524920988,0.116876902181569,0,0,0.269141569828427,0.503653849092235,0.772758376128762,0.563047426353546,0.183151624267265,1.2862102744744,0,9.03602948187307,7.36520378411483,9.73922372846974,6.18671456437275,4.7955776383945,5.2877572817279,4.72515750162264,1.80128481289688,3.62513927187364,1.03552062350364,0.518936737920883,1.19707462020309,0.682934423016537,0.243106717068294,0,0.551530525350042,0,0.206035057238894,0,0.505394423527595,0.25347929989024,0.943131706930381,0.37456602987953,0.832326981263301,0.631790158511746,0.476293691283074,0.463537303779422,0.77163688185482,0,0.294397840268795,0,1.06485483695602,0.953744759789284,0.436039249896986,0.564656282491984,0.676916863133412,0,0.789209134313529,0.407412341537585,0,0.593175090620871,0.29551344712669,1.22769312950907,0.619747364743864,1.54325288784913,0,0.467863216890817,0.859484216193193,0.765153328275374,0,0.231867835620421
|short_description=p2@Coq4
}}

Latest revision as of 12:35, 26 September 2015

Short description:p2@Coq4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Coq4_5end
Coexpression cluster:MCL_coexpression_mm9:789
Association with transcript: 58bp_to_uc008jad.1, uc012bti.1_5end
EntrezGene:Coq4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Coq4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.60
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.89
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I67.28
CD326+ enterocyte, pool1.CNhs13542.11848-124I319.36
CD326+ enterocyte, pool2.CNhs13197.11849-124I49.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.10
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.56
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.87
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.55
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.81
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.40
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.75
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I13.45
GP2+ M cell, pool3.CNhs13240.11847-124I22.15
Ileum epithelium, pool1.CNhs13199.10252-104B92.66
Ileum epithelium, pool2.CNhs13232.10253-104C12.02
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G83.77
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H34.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G915.88
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H210.93
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H47.77
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.53
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.76
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.96
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C83.60
Mouse Microglia, donor2.CNhs12634.11736-123E87.30
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.52
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.95
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.65
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.22
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.96
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.45
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.60
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.24
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.68
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.91
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I31.01
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H72.55
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.35
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.88
cortex, adult.CNhs10473.12-14D52.26
cortex, neonate N30.CNhs11107.1392-42F23.07
diencephalon, adult.CNhs10482.20-12F21.66
diencephalon, neonate N30.CNhs11201.1388-42B21.62
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G43.79
eyeball, embryo E12.CNhs11016.345-16C61.17
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C60.61
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.56
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E82.73
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I317.84
intestine, adult.CNhs10496.178-9A38.20
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H42.02
intestine, embryo E17.CNhs10582.482-18D31.78
intestine, embryo E18.CNhs10526.1289-20F73.04
intestine, neonate N00.CNhs11126.644-26D14.27
intestine, neonate N01.CNhs11192.1322-23E91.81
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F21.99
intestine, neonate N10.CNhs11098.755-23A52.53
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E32.59
intestine, neonate N30.CNhs11131.1384-42G12.99
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.49
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I61.43
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B93.01
pituitary gland, embryo E16.CNhs11036.449-43F61.61
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C31.15
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H31.09
skin, neonate N06.CNhs11097.693-20I51.31
skin, neonate N10.CNhs11108.762-6C41.31
small intestine, neonate N16.CNhs11114.790-21I15.83
spinal cord, adult.CNhs10505.24-13C91.30
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I11.43
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G514.66
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.90
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.84
testis, neonate N20.CNhs11110.839-18H36.28
testis, neonate N30.CNhs11130.1391-42E26.05
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D51.29
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.04
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.37
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A39.74
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.19
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A55.29
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.52
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.63
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system2.99e-1273
nervous system1.42e-1175
ecto-epithelium1.93e-1073
ectoderm-derived structure2.05e-1095
ectoderm2.05e-1095
presumptive ectoderm2.05e-1095
neural tube2.47e-1052
neural rod2.47e-1052
future spinal cord2.47e-1052
neural keel2.47e-1052
gray matter3.20e-1034
occipital lobe8.99e-1010
visual cortex8.99e-1010
neocortex8.99e-1010
anterior neural tube9.50e-1040
regional part of nervous system1.55e-0954
intestine1.71e-0931
regional part of forebrain2.38e-0939
forebrain2.38e-0939
future forebrain2.38e-0939
neurectoderm2.66e-0964
neural plate2.66e-0964
presumptive neural plate2.66e-0964
regional part of cerebral cortex6.19e-0917
brain grey matter2.40e-0829
regional part of telencephalon2.40e-0829
telencephalon2.40e-0829
regional part of brain3.43e-0846
pre-chordal neural plate5.01e-0849
brain7.55e-0847
future brain7.55e-0847
cerebral cortex1.56e-0721
cerebral hemisphere1.56e-0721
pallium1.56e-0721
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