FFCP PHASE1:Mm9::chr2:32241576..32241588,-: Difference between revisions
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{{FFCP|EntrezGene=16819|HGNC=|MCL_coexpression_id=3|UniProt=|association_with_transcript=38bp_to_ENSMUST00000155830_5end|description=CAGE_peak_5_at_Lcn2_5end|id=chr2:32241576..32241588,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000355,1.20e-09,9|ontology_enrichment_disease=DOID:0060100!4.61e-08!3;DOID:4045!4.61e-08!3|ontology_enrichment_disease_v019_2=DOID:0060100,1.37e-27,3;DOID:4045,1.37e-27,3;DOID:0050686,3.68e-14,6|ontology_enrichment_uberon=UBERON:0003887!6.00e-09!10;UBERON:0002106!9.70e-08!6;UBERON:0004457!9.70e-08!6;UBERON:0000042!9.70e-08!6;UBERON:0004854!9.70e-08!6;UBERON:0009034!9.70e-08!6;UBERON:0002095!9.70e-08!6;UBERON:0004782!9.70e-08!6;UBERON:0003281!9.70e-08!6;UBERON:0009664!9.70e-08!6;UBERON:0002296!9.70e-08!6;UBERON:0005602!9.70e-08!6;UBERON:0001179!9.70e-08!6;UBERON:0006293!9.70e-08!6|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.20e-09,9;UBERON:0002036,1.20e-09,9;UBERON:0002385,1.20e-09,9;UBERON:0000486,1.20e-09,9;UBERON:0007503,1.20e-09,9;UBERON:0001015,1.20e-09,9;UBERON:0002329,1.20e-09,9;UBERON:0003082,1.20e-09,9;UBERON:0003059,1.20e-09,9;UBERON:0007282,1.20e-09,9;UBERON:0004290,1.20e-09,9;UBERON:0009618,1.20e-09,9;UBERON:0000383,9.68e-09,10;UBERON:0007524,5.37e-08,11;UBERON:0003077,5.37e-08,11;UBERON:0007285,5.37e-08,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,59.012959933904,67.1948396290468,48.6877081895632,52.9408339227913,40.2996836125483,60.6887941288942,0,0,0,0,0,0.659058548203415,0.58328969722285,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0.883366073841574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622034853050465,2.0217820674694,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0.482354319504834,0.50925170356284,0.575392274901621,0.810676133875177,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.854354403989263,0.206386867963223,0.185194527369712,0.188368457004691,0.136694227721025,0,0,0,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,6.20062232552609,0,0,0,0.258319646955462,0,0,0,0,0,1.72818003754719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0.320919209591815,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0.412085900803307,0,0,0,0,0,0.188218760830661,0.0846146078916765,0,0,0.271608227691724,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0.463735671240843|short_description=p5@Lcn2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16819 | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=38bp_to_ENSMUST00000155830_5end | |||
|cluster_id=chr2:32241576..32241588,- | |||
|description=CAGE_peak_5_at_Lcn2_5end | |||
|id=chr2:32241576..32241588,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,1.20e-09,9 | |||
|ontology_enrichment_disease=DOID:0060100!4.61e-08!3;DOID:4045!4.61e-08!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.37e-27,3;DOID:4045,1.37e-27,3;DOID:0050686,3.68e-14,6 | |||
|ontology_enrichment_uberon=UBERON:0003887!6.00e-09!10;UBERON:0002106!9.70e-08!6;UBERON:0004457!9.70e-08!6;UBERON:0000042!9.70e-08!6;UBERON:0004854!9.70e-08!6;UBERON:0009034!9.70e-08!6;UBERON:0002095!9.70e-08!6;UBERON:0004782!9.70e-08!6;UBERON:0003281!9.70e-08!6;UBERON:0009664!9.70e-08!6;UBERON:0002296!9.70e-08!6;UBERON:0005602!9.70e-08!6;UBERON:0001179!9.70e-08!6;UBERON:0006293!9.70e-08!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.20e-09,9;UBERON:0002036,1.20e-09,9;UBERON:0002385,1.20e-09,9;UBERON:0000486,1.20e-09,9;UBERON:0007503,1.20e-09,9;UBERON:0001015,1.20e-09,9;UBERON:0002329,1.20e-09,9;UBERON:0003082,1.20e-09,9;UBERON:0003059,1.20e-09,9;UBERON:0007282,1.20e-09,9;UBERON:0004290,1.20e-09,9;UBERON:0009618,1.20e-09,9;UBERON:0000383,9.68e-09,10;UBERON:0007524,5.37e-08,11;UBERON:0003077,5.37e-08,11;UBERON:0007285,5.37e-08,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,59.012959933904,67.1948396290468,48.6877081895632,52.9408339227913,40.2996836125483,60.6887941288942,0,0,0,0,0,0.659058548203415,0.58328969722285,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0.883366073841574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622034853050465,2.0217820674694,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0.482354319504834,0.50925170356284,0.575392274901621,0.810676133875177,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.854354403989263,0.206386867963223,0.185194527369712,0.188368457004691,0.136694227721025,0,0,0,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,6.20062232552609,0,0,0,0.258319646955462,0,0,0,0,0,1.72818003754719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0.320919209591815,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0.412085900803307,0,0,0,0,0,0.188218760830661,0.0846146078916765,0,0,0.271608227691724,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0.463735671240843 | |||
|short_description=p5@Lcn2 | |||
}} |
Latest revision as of 14:20, 26 September 2015
Short description: | p5@Lcn2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Lcn2_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 38bp_to_ENSMUST00000155830_5end |
EntrezGene: | Lcn2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 1.20e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.20e-09 | 9 |
striated muscle tissue | 1.20e-09 | 9 |
muscle tissue | 1.20e-09 | 9 |
multilaminar epithelium | 1.20e-09 | 9 |
epithelial vesicle | 1.20e-09 | 9 |
musculature | 1.20e-09 | 9 |
somite | 1.20e-09 | 9 |
myotome | 1.20e-09 | 9 |
presomitic mesoderm | 1.20e-09 | 9 |
presumptive segmental plate | 1.20e-09 | 9 |
dermomyotome | 1.20e-09 | 9 |
trunk paraxial mesoderm | 1.20e-09 | 9 |
musculature of body | 9.68e-09 | 10 |
dense mesenchyme tissue | 5.37e-08 | 11 |
paraxial mesoderm | 5.37e-08 | 11 |
presumptive paraxial mesoderm | 5.37e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.37e-27 | 3 |
muscle cancer | 1.37e-27 | 3 |
organ system cancer | 3.68e-14 | 6 |