FFCP PHASE1:Mm9::chr3:116510969..116510979,-: Difference between revisions
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{{FFCP|EntrezGene=77559|HGNC=|MCL_coexpression_id=2259|UniProt=E0CYU6|association_with_transcript=-9bp_to_ENSMUST00000161336_5end|description=CAGE_peak_10_at_Agl_5end|id=chr3:116510969..116510979,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003914!2.27e-12!47;UBERON:0002107!4.94e-08!22;UBERON:0007499!4.94e-08!22;UBERON:0006925!4.94e-08!22;UBERON:0009497!4.94e-08!22;UBERON:0000015!4.94e-08!22;UBERON:0002423!4.94e-08!22;UBERON:0006235!4.94e-08!22;UBERON:0008835!4.94e-08!22;UBERON:0003894!4.94e-08!22;UBERON:0004161!4.94e-08!22;UBERON:0008836!4.94e-08!22;UBERON:0002365!2.22e-07!25;UBERON:0002330!2.22e-07!25;UBERON:0009854!2.91e-07!23;UBERON:0009856!2.91e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0003914,1.74e-13,47;UBERON:0002107,1.30e-09,22;UBERON:0007499,1.30e-09,22;UBERON:0006925,1.30e-09,22;UBERON:0009497,1.30e-09,22;UBERON:0000015,1.30e-09,22;UBERON:0002423,1.30e-09,22;UBERON:0006235,1.30e-09,22;UBERON:0008835,1.30e-09,22;UBERON:0003894,1.30e-09,22;UBERON:0004161,1.30e-09,22;UBERON:0008836,1.30e-09,22;UBERON:0009854,4.38e-09,23;UBERON:0009856,4.38e-09,23;UBERON:0002365,3.67e-08,25;UBERON:0002330,3.67e-08,25;UBERON:0005418,3.98e-07,5;UBERON:0002472,3.98e-07,5;UBERON:0008784,3.98e-07,5;UBERON:0006058,3.98e-07,5;UBERON:0004709,3.98e-07,5;UBERON:0002529,3.98e-07,5;UBERON:0010538,3.98e-07,5;UBERON:0005420,3.98e-07,5;UBERON:0010758,3.98e-07,5;UBERON:0000978,3.98e-07,5;UBERON:0002103,3.98e-07,5;UBERON:0000376,3.98e-07,5;UBERON:0000154,3.98e-07,5;UBERON:0010709,3.98e-07,5;UBERON:0005730,3.98e-07,5|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0.17008658030214,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0.183546752161682,0,0.65407546914134,0,0,0.139986421625363,0,0,0,0,0.257259436035947,0.286533439938757,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.207379224616955,0,0,0,0.220868540951614,0,0,0,0,0.893811366596314,0.46081959976873,0,0,0,0.279182999001381,0,0.30559649555362,0,0.569486723196412,0,0,0,0.579728977403356,0.860423876981386,0,3.77792234146472,1.94932925234301,3.13618820968135,2.94933282276679,0,0,0.35333957451034,0.281686839553361,0,0,0,0.216491041011214,0,0,0.45673551887624,0,0.742210695324124,0.173485326766136,0.913396434936424,1.15307748628029,0.60289056221049,0.587943535678524,0.502666365318702,0,2.16899035379867,0.884610551949874,1.29413479957927,2.87093973998512,2.42437626567611,0,1.17112318804619,0.41889341362691,0,0,0.599902730993408,0,0.748953197024114,0.457500602818626,0.125654352112864,0.347648640384553,0.767146371990992,1.0389402227978,0.324482526135515,0,0.746441823660558,0.252722758433675,0.841767423545896,0.260240885925407,0,0,0.150704817835715,0.136072998302656,0,0.468508622798644,1.29351685369508,0,0.567318240503458,0,0.43839146485515,0.278047249225598,0,0.205782136407943,0.199034266818493,0,0,0,0.207125772535502,0.469052119962192,0.540186184383045,0.473489471170421,0.787056926989615,0.617068451549513,0.930135779001631,1.60964040839772,1.86824547787471,2.13927804887525,2.62667942526552,3.08061476274252,2.77779976108131,5.26920276698522,2.54992195644706,0.210289948564127,0,0.330418782983798,0.264450566663544,0,0,0.38660238396628,0.201683524623343,0.667134131534611,0.190225626112559,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0.379335801906163,0,0,0,0.581857461502877,0.420814919341911,0.505892296994058,0.295220295959204,0.156998727841375,0.987177311374404,4.15033677922008,0.500535317148282,0.196558995113203,0,0.811440485554012,1.20588579876208,1.2731292589071,2.87696137450811,0.810676133875177,0.549122826376163,4.31304619582064,0.372140947668503,0.936113019343682,3.28352541331245,1.25578189465339,3.37710464954357,0.184753190166605,0,0,0,0.234690248288502,0.335012514883631,0,0,0.157635144106191,0,0.318909537314974,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0.491764273019036,0.275936746304732,1.60550589987792,0.703270119553219,0.163934945376675,13.1284882146274,0,0,1.07711698866399,0,0.222798674082394,0.283076530788832,0.809621403349789,0.584511715822624,0,0.642642632843614,0.425820255624806,0,0.488660878060728,0.659880491890142,1.32745138339963,0.485561272309963,0.604647113929502,0.754420319023592,0,1.22974059177571,0,0,0,0.632073515871632,0,0,0.340439605753788,0.18006109403131,0.129358683782755,0.214337035031592,0.177340233642274,0.178368817602071,0,0,0,0.21183207086382,0.661585194164886,1.15420377059036,0.968786560175433,0.422190474497091,0,0,0,0.927126510052548,0.170870880797853,0,0.185194527369712,0,0,0.228778173206523,0,0,0,0,0.158167996790568,0.203319467126849,0.216010681643603,0.209088296014469,0.218362563746178,0.539457385539283,0.165306911450672,0,0.259229946583586,0,0,0.149516546043979,0.165458490457098,0.194451188344048,0,0.168956125490778,0,0.2604087696879,0.104859344425711,0,1.15212002503146,0.316011120628178,0,0.205421914329655,0.12992082297779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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=77559 | |||
|HGNC= | |||
|MCL_coexpression_id=2259 | |||
|TSSclassifier=NA | |||
|UniProt=E0CYU6 | |||
|association_with_transcript=-9bp_to_ENSMUST00000161336_5end | |||
|cluster_id=chr3:116510969..116510979,- | |||
|description=CAGE_peak_10_at_Agl_5end | |||
|id=chr3:116510969..116510979,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!2.27e-12!47;UBERON:0002107!4.94e-08!22;UBERON:0007499!4.94e-08!22;UBERON:0006925!4.94e-08!22;UBERON:0009497!4.94e-08!22;UBERON:0000015!4.94e-08!22;UBERON:0002423!4.94e-08!22;UBERON:0006235!4.94e-08!22;UBERON:0008835!4.94e-08!22;UBERON:0003894!4.94e-08!22;UBERON:0004161!4.94e-08!22;UBERON:0008836!4.94e-08!22;UBERON:0002365!2.22e-07!25;UBERON:0002330!2.22e-07!25;UBERON:0009854!2.91e-07!23;UBERON:0009856!2.91e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,1.74e-13,47;UBERON:0002107,1.30e-09,22;UBERON:0007499,1.30e-09,22;UBERON:0006925,1.30e-09,22;UBERON:0009497,1.30e-09,22;UBERON:0000015,1.30e-09,22;UBERON:0002423,1.30e-09,22;UBERON:0006235,1.30e-09,22;UBERON:0008835,1.30e-09,22;UBERON:0003894,1.30e-09,22;UBERON:0004161,1.30e-09,22;UBERON:0008836,1.30e-09,22;UBERON:0009854,4.38e-09,23;UBERON:0009856,4.38e-09,23;UBERON:0002365,3.67e-08,25;UBERON:0002330,3.67e-08,25;UBERON:0005418,3.98e-07,5;UBERON:0002472,3.98e-07,5;UBERON:0008784,3.98e-07,5;UBERON:0006058,3.98e-07,5;UBERON:0004709,3.98e-07,5;UBERON:0002529,3.98e-07,5;UBERON:0010538,3.98e-07,5;UBERON:0005420,3.98e-07,5;UBERON:0010758,3.98e-07,5;UBERON:0000978,3.98e-07,5;UBERON:0002103,3.98e-07,5;UBERON:0000376,3.98e-07,5;UBERON:0000154,3.98e-07,5;UBERON:0010709,3.98e-07,5;UBERON:0005730,3.98e-07,5 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0.17008658030214,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0.183546752161682,0,0.65407546914134,0,0,0.139986421625363,0,0,0,0,0.257259436035947,0.286533439938757,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.207379224616955,0,0,0,0.220868540951614,0,0,0,0,0.893811366596314,0.46081959976873,0,0,0,0.279182999001381,0,0.30559649555362,0,0.569486723196412,0,0,0,0.579728977403356,0.860423876981386,0,3.77792234146472,1.94932925234301,3.13618820968135,2.94933282276679,0,0,0.35333957451034,0.281686839553361,0,0,0,0.216491041011214,0,0,0.45673551887624,0,0.742210695324124,0.173485326766136,0.913396434936424,1.15307748628029,0.60289056221049,0.587943535678524,0.502666365318702,0,2.16899035379867,0.884610551949874,1.29413479957927,2.87093973998512,2.42437626567611,0,1.17112318804619,0.41889341362691,0,0,0.599902730993408,0,0.748953197024114,0.457500602818626,0.125654352112864,0.347648640384553,0.767146371990992,1.0389402227978,0.324482526135515,0,0.746441823660558,0.252722758433675,0.841767423545896,0.260240885925407,0,0,0.150704817835715,0.136072998302656,0,0.468508622798644,1.29351685369508,0,0.567318240503458,0,0.43839146485515,0.278047249225598,0,0.205782136407943,0.199034266818493,0,0,0,0.207125772535502,0.469052119962192,0.540186184383045,0.473489471170421,0.787056926989615,0.617068451549513,0.930135779001631,1.60964040839772,1.86824547787471,2.13927804887525,2.62667942526552,3.08061476274252,2.77779976108131,5.26920276698522,2.54992195644706,0.210289948564127,0,0.330418782983798,0.264450566663544,0,0,0.38660238396628,0.201683524623343,0.667134131534611,0.190225626112559,0,0.164698954724011,0,0.198956472041151,0,0,0,0,0.379335801906163,0,0,0,0.581857461502877,0.420814919341911,0.505892296994058,0.295220295959204,0.156998727841375,0.987177311374404,4.15033677922008,0.500535317148282,0.196558995113203,0,0.811440485554012,1.20588579876208,1.2731292589071,2.87696137450811,0.810676133875177,0.549122826376163,4.31304619582064,0.372140947668503,0.936113019343682,3.28352541331245,1.25578189465339,3.37710464954357,0.184753190166605,0,0,0,0.234690248288502,0.335012514883631,0,0,0.157635144106191,0,0.318909537314974,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0.491764273019036,0.275936746304732,1.60550589987792,0.703270119553219,0.163934945376675,13.1284882146274,0,0,1.07711698866399,0,0.222798674082394,0.283076530788832,0.809621403349789,0.584511715822624,0,0.642642632843614,0.425820255624806,0,0.488660878060728,0.659880491890142,1.32745138339963,0.485561272309963,0.604647113929502,0.754420319023592,0,1.22974059177571,0,0,0,0.632073515871632,0,0,0.340439605753788,0.18006109403131,0.129358683782755,0.214337035031592,0.177340233642274,0.178368817602071,0,0,0,0.21183207086382,0.661585194164886,1.15420377059036,0.968786560175433,0.422190474497091,0,0,0,0.927126510052548,0.170870880797853,0,0.185194527369712,0,0,0.228778173206523,0,0,0,0,0.158167996790568,0.203319467126849,0.216010681643603,0.209088296014469,0.218362563746178,0.539457385539283,0.165306911450672,0,0.259229946583586,0,0,0.149516546043979,0.165458490457098,0.194451188344048,0,0.168956125490778,0,0.2604087696879,0.104859344425711,0,1.15212002503146,0.316011120628178,0,0.205421914329655,0.129920822977795,0,0,0.120195449519969,0,0.100966449948148,0.228620419965,0,0,0,0.233753804363138,3.17422537061296,0.665957860122194,0.179427713218951,0,0.579568782096571,0.187682475451182,0.549454872801795,0,0,0,0,0,0,0,0,0,0.45032120322422,0.906284817968409,0.51776031175182,0.103787347584177,0.798049746802062,0,0.486213434136588,0.419226325255965,0.551530525350042,0.888986911206461,0.618105171716683,0,1.26348605881899,0,1.13175804831646,0.561849044819294,0.89635213366817,0.804096565378586,1.42888107384922,0.115884325944855,1.35036454324594,0.412085900803307,0.883193520806384,2.05721551431249,0.887379030796687,0.238436189947321,0.872078499793971,0.376437521661322,0.676916863133412,0.914639864363863,0.526139422875686,0.543216455383447,1.68342681497322,0.949080144993393,0.197008964751127,0.409231043169689,0.154936841185966,0.771626443924566,0.249810577937946,2.10538447600868,0.859484216193193,2.10417165275728,2.42650561031467,1.85494268496337 | |||
|short_description=p10@Agl | |||
}} |
Latest revision as of 12:14, 1 October 2015
Short description: | p10@Agl |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Agl_5end |
Coexpression cluster: | MCL_coexpression_mm9:2259 |
Association with transcript: | -9bp_to_ENSMUST00000161336_5end |
EntrezGene: | Agl |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial tube | 1.74e-13 | 47 |
liver | 1.30e-09 | 22 |
epithelial sac | 1.30e-09 | 22 |
digestive gland | 1.30e-09 | 22 |
epithelium of foregut-midgut junction | 1.30e-09 | 22 |
anatomical boundary | 1.30e-09 | 22 |
hepatobiliary system | 1.30e-09 | 22 |
foregut-midgut junction | 1.30e-09 | 22 |
hepatic diverticulum | 1.30e-09 | 22 |
liver primordium | 1.30e-09 | 22 |
septum transversum | 1.30e-09 | 22 |
liver bud | 1.30e-09 | 22 |
digestive tract diverticulum | 4.38e-09 | 23 |
sac | 4.38e-09 | 23 |
exocrine gland | 3.67e-08 | 25 |
exocrine system | 3.67e-08 | 25 |
hindlimb bud | 3.98e-07 | 5 |
stylopod | 3.98e-07 | 5 |
lower limb segment | 3.98e-07 | 5 |
multi-limb segment region | 3.98e-07 | 5 |
pelvic appendage | 3.98e-07 | 5 |
limb segment | 3.98e-07 | 5 |
paired limb/fin segment | 3.98e-07 | 5 |
pelvic appendage bud | 3.98e-07 | 5 |
subdivision of organism along appendicular axis | 3.98e-07 | 5 |
leg | 3.98e-07 | 5 |
hindlimb | 3.98e-07 | 5 |
hindlimb stylopod | 3.98e-07 | 5 |
posterior region of body | 3.98e-07 | 5 |
pelvic complex | 3.98e-07 | 5 |
hindlimb/pelvic fin field | 3.98e-07 | 5 |