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FFCP PHASE1:Mm9::chr3:116511136..116511186,-: Difference between revisions

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{{FFCP|EntrezGene=77559|HGNC=|UniProt=F8VPN4|association_with_transcript=-52bp_to_ENSMUST00000040603,NM_001081326,uc008rcq.1,uc008rcs.1,uc012cwu.1_5end|description=CAGE_peak_3_at_Agl_5end|id=chr3:116511136..116511186,-|ontology_enrichment_celltype=CL:0000117!2.76e-13!23;CL:0000337!2.76e-13!23;CL:0000540!1.18e-12!33;CL:0000047!1.18e-12!33;CL:0000031!1.18e-12!33;CL:0000404!1.18e-12!33;CL:0000393!3.84e-10!39;CL:0000211!3.84e-10!39;CL:0000221!1.43e-08!44;CL:0000133!1.43e-08!44;CL:0002319!3.02e-08!43|ontology_enrichment_celltype_v019_2=CL:0000117,2.17e-13,23;CL:0000337,2.17e-13,23;CL:0000540,9.41e-13,33;CL:0000047,9.41e-13,33;CL:0000031,9.41e-13,33;CL:0000404,9.41e-13,33;CL:0000393,3.22e-10,39;CL:0000211,3.22e-10,39;CL:0000221,1.26e-08,44;CL:0000133,1.26e-08,44;CL:0002319,2.68e-08,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.30e-09!73;UBERON:0005743!1.30e-09!73;UBERON:0000073!3.40e-09!75;UBERON:0001016!3.40e-09!75;UBERON:0000153!6.64e-09!94;UBERON:0001049!2.90e-08!52;UBERON:0005068!2.90e-08!52;UBERON:0006241!2.90e-08!52;UBERON:0007135!2.90e-08!52;UBERON:0004121!3.18e-08!102;UBERON:0000924!3.18e-08!102;UBERON:0006601!3.18e-08!102;UBERON:0007811!1.17e-07!86;UBERON:0002616!2.00e-07!49;UBERON:0002020!3.23e-07!34;UBERON:0000955!4.72e-07!50;UBERON:0006238!4.72e-07!50;UBERON:0000033!5.74e-07!63|ontology_enrichment_uberon_v019_2=UBERON:0004121,4.54e-10,95;UBERON:0000924,4.54e-10,95;UBERON:0006601,4.54e-10,95;UBERON:0001017,1.12e-09,73;UBERON:0010371,2.71e-09,73;UBERON:0001016,2.95e-09,75;UBERON:0000073,3.72e-09,54;UBERON:0001049,2.52e-08,52;UBERON:0005068,2.52e-08,52;UBERON:0006241,2.52e-08,52;UBERON:0007135,2.52e-08,52;UBERON:0002346,3.28e-08,64;UBERON:0003075,3.28e-08,64;UBERON:0007284,3.28e-08,64;UBERON:0002020,2.88e-07,34|phase1_expression=4.32401887182944,0.697950815278722,0.909998478779072,0,0,0.503637815735669,0.467225281191051,1.03298658753261,0,0.70219357896598,0,1.03703806693937,0.171200729931206,0.699363219351979,0.666219523631325,1.01237633694913,0.699561878128147,1.73504190947031,2.05671650408608,3.39511721438424,3.40173160604279,0.695036658406197,0.261199789138935,0.319984845586813,1.14704640533585,0.57423196411502,0,0.430942465371778,0.380046838912748,0.504060259519861,0.221730510655305,1.27006134691926,1.84519436275371,0,0.866554859253824,0.664938581433969,0.204169356262369,1.67412652294763,0,3.14114246384279,4.1176204162171,2.73218193983378,3.88408282424923,1.6366586336825,2.33166941804883,2.0190142737785,4.69434806608824,1.30815093828268,1.5378032791413,1.94429899074283,2.93971485413261,0,1.51004345451963,0,2.35265659399725,1.80081605225163,2.57880095944881,2.06268836910977,10.5204559646991,7.93486468908049,8.23980824558033,2.37191172448392,3.55717918444456,0,1.97773272513395,0,1.19840044207362,0.768436610643109,10.6800300677732,8.50537411489651,9.46462326081219,5.14171771926846,5.52171352379034,9.0643191419066,8.62609239164127,10.1114066527102,7.70811166995721,5.61824287574826,4.6081959976873,8.04506355154182,8.41686321142169,8.33461392890816,6.14202597803038,4.50210088025344,6.26472815884921,4.12480019663135,5.41012387036591,7.64237727883732,1.74170244666323,2.26714680320357,0.289864488701678,0,0,0,0,0,1.96622188184453,1.1930122580464,0.259786004602869,2.82671659608272,5.0703631119605,1.28326477414318,0,7.11066703153331,2.81438353314578,3.54703811665138,0,0.79928715803342,1.03575153458869,1.1875371125186,2.60227990149204,0.913396434936424,2.53677046981664,1.05505848386836,1.76383060703557,1.13099932196708,4.44950941921873,0.722996784599558,0,4.20593809863264,1.10420759230197,2.42437626567611,1.86391761218122,2.63502717310392,1.46612694769419,0.510914110417183,0.599075622529601,0.599902730993408,1.39777249780371,5.09288173976397,1.37250180845588,9.92669381691629,3.82413504423008,3.06858548796397,2.70124457927428,4.54275536589721,5.49932564791708,2.23932547098167,2.0217820674694,1.26265113531884,3.90361328888111,2.75882525320168,4.32149111532838,3.31550599238573,4.96666443804693,2.94661556655154,3.46696380870997,2.06962696591213,1.72454394346274,5.10586416453112,7.9178005873777,7.01426343768239,9.45360647367033,3.83077383174383,3.90986059175093,3.98068533636986,0,0.257347907114715,1.13665399758237,4.34964122324554,3.98694301967864,3.24111710629827,3.07768156260773,2.36117078096885,2.00547246753592,2.55787339225449,2.14618721119695,2.80236821681207,2.96207729844265,0.985004784474571,1.4592385718254,1.02339991197733,0.219550115291051,0.939444931322602,3.15434922846191,7.51203670368776,0.330418782983798,1.05780226665418,4.90562976231038,5.34144345279009,3.09281907173024,3.83198696784351,2.89091456998331,4.56541502670142,0.474529061544512,2.63518327558417,1.50801125280162,3.78017296878187,2.53453313254856,1.79763881730844,0.648414149624083,0.995706366271836,1.32767530667157,2.28497025219458,3.38123207019241,3.46207257337034,4.26695471768777,4.69909993265134,3.92066530170395,2.06654207171443,2.19798218977925,1.97435462274881,0,1.167915740012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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=77559
|HGNC=
|TSSclassifier=NA
|UniProt=F8VPN4
|association_with_transcript=-52bp_to_ENSMUST00000040603,NM_001081326,uc008rcq.1,uc008rcs.1,uc012cwu.1_5end
|cluster_id=chr3:116511136..116511186,-
|description=CAGE_peak_3_at_Agl_5end
|id=chr3:116511136..116511186,-
|ontology_enrichment_celltype=CL:0000117!2.76e-13!23;CL:0000337!2.76e-13!23;CL:0000540!1.18e-12!33;CL:0000047!1.18e-12!33;CL:0000031!1.18e-12!33;CL:0000404!1.18e-12!33;CL:0000393!3.84e-10!39;CL:0000211!3.84e-10!39;CL:0000221!1.43e-08!44;CL:0000133!1.43e-08!44;CL:0002319!3.02e-08!43
|ontology_enrichment_celltype_v019_2=CL:0000117,2.17e-13,23;CL:0000337,2.17e-13,23;CL:0000540,9.41e-13,33;CL:0000047,9.41e-13,33;CL:0000031,9.41e-13,33;CL:0000404,9.41e-13,33;CL:0000393,3.22e-10,39;CL:0000211,3.22e-10,39;CL:0000221,1.26e-08,44;CL:0000133,1.26e-08,44;CL:0002319,2.68e-08,43
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.30e-09!73;UBERON:0005743!1.30e-09!73;UBERON:0000073!3.40e-09!75;UBERON:0001016!3.40e-09!75;UBERON:0000153!6.64e-09!94;UBERON:0001049!2.90e-08!52;UBERON:0005068!2.90e-08!52;UBERON:0006241!2.90e-08!52;UBERON:0007135!2.90e-08!52;UBERON:0004121!3.18e-08!102;UBERON:0000924!3.18e-08!102;UBERON:0006601!3.18e-08!102;UBERON:0007811!1.17e-07!86;UBERON:0002616!2.00e-07!49;UBERON:0002020!3.23e-07!34;UBERON:0000955!4.72e-07!50;UBERON:0006238!4.72e-07!50;UBERON:0000033!5.74e-07!63
|ontology_enrichment_uberon_v019_2=UBERON:0004121,4.54e-10,95;UBERON:0000924,4.54e-10,95;UBERON:0006601,4.54e-10,95;UBERON:0001017,1.12e-09,73;UBERON:0010371,2.71e-09,73;UBERON:0001016,2.95e-09,75;UBERON:0000073,3.72e-09,54;UBERON:0001049,2.52e-08,52;UBERON:0005068,2.52e-08,52;UBERON:0006241,2.52e-08,52;UBERON:0007135,2.52e-08,52;UBERON:0002346,3.28e-08,64;UBERON:0003075,3.28e-08,64;UBERON:0007284,3.28e-08,64;UBERON:0002020,2.88e-07,34
|phase1_expression=4.32401887182944,0.697950815278722,0.909998478779072,0,0,0.503637815735669,0.467225281191051,1.03298658753261,0,0.70219357896598,0,1.03703806693937,0.171200729931206,0.699363219351979,0.666219523631325,1.01237633694913,0.699561878128147,1.73504190947031,2.05671650408608,3.39511721438424,3.40173160604279,0.695036658406197,0.261199789138935,0.319984845586813,1.14704640533585,0.57423196411502,0,0.430942465371778,0.380046838912748,0.504060259519861,0.221730510655305,1.27006134691926,1.84519436275371,0,0.866554859253824,0.664938581433969,0.204169356262369,1.67412652294763,0,3.14114246384279,4.1176204162171,2.73218193983378,3.88408282424923,1.6366586336825,2.33166941804883,2.0190142737785,4.69434806608824,1.30815093828268,1.5378032791413,1.94429899074283,2.93971485413261,0,1.51004345451963,0,2.35265659399725,1.80081605225163,2.57880095944881,2.06268836910977,10.5204559646991,7.93486468908049,8.23980824558033,2.37191172448392,3.55717918444456,0,1.97773272513395,0,1.19840044207362,0.768436610643109,10.6800300677732,8.50537411489651,9.46462326081219,5.14171771926846,5.52171352379034,9.0643191419066,8.62609239164127,10.1114066527102,7.70811166995721,5.61824287574826,4.6081959976873,8.04506355154182,8.41686321142169,8.33461392890816,6.14202597803038,4.50210088025344,6.26472815884921,4.12480019663135,5.41012387036591,7.64237727883732,1.74170244666323,2.26714680320357,0.289864488701678,0,0,0,0,0,1.96622188184453,1.1930122580464,0.259786004602869,2.82671659608272,5.0703631119605,1.28326477414318,0,7.11066703153331,2.81438353314578,3.54703811665138,0,0.79928715803342,1.03575153458869,1.1875371125186,2.60227990149204,0.913396434936424,2.53677046981664,1.05505848386836,1.76383060703557,1.13099932196708,4.44950941921873,0.722996784599558,0,4.20593809863264,1.10420759230197,2.42437626567611,1.86391761218122,2.63502717310392,1.46612694769419,0.510914110417183,0.599075622529601,0.599902730993408,1.39777249780371,5.09288173976397,1.37250180845588,9.92669381691629,3.82413504423008,3.06858548796397,2.70124457927428,4.54275536589721,5.49932564791708,2.23932547098167,2.0217820674694,1.26265113531884,3.90361328888111,2.75882525320168,4.32149111532838,3.31550599238573,4.96666443804693,2.94661556655154,3.46696380870997,2.06962696591213,1.72454394346274,5.10586416453112,7.9178005873777,7.01426343768239,9.45360647367033,3.83077383174383,3.90986059175093,3.98068533636986,0,0.257347907114715,1.13665399758237,4.34964122324554,3.98694301967864,3.24111710629827,3.07768156260773,2.36117078096885,2.00547246753592,2.55787339225449,2.14618721119695,2.80236821681207,2.96207729844265,0.985004784474571,1.4592385718254,1.02339991197733,0.219550115291051,0.939444931322602,3.15434922846191,7.51203670368776,0.330418782983798,1.05780226665418,4.90562976231038,5.34144345279009,3.09281907173024,3.83198696784351,2.89091456998331,4.56541502670142,0.474529061544512,2.63518327558417,1.50801125280162,3.78017296878187,2.53453313254856,1.79763881730844,0.648414149624083,0.995706366271836,1.32767530667157,2.28497025219458,3.38123207019241,3.46207257337034,4.26695471768777,4.69909993265134,3.92066530170395,2.06654207171443,2.19798218977925,1.97435462274881,0,1.16791574001266,1.76903095601883,2.9232074610031,0.405720242777006,0.964708639009667,0.763877555344259,1.15078454980324,0.810676133875177,1.64736847912849,5.75072826109418,0.744281895337007,0.312037673114561,0,0.179397413521912,0,0.369506380333209,3.97931964718018,3.91115943460862,2.8856664581782,3.05097322775053,3.1826188913945,2.85652369063216,3.31727201358258,1.57635144106191,3.32197034473162,1.91345722388985,0.491589944147214,1.55416483679306,1.44649058581512,0,3.26343410291226,0.491764273019036,0.275936746304732,3.85321415970701,4.57125577709592,7.37707254195039,1.76729649043061,3.78609863299508,3.12350995437311,2.58508077279359,4.30143836314594,3.11918143715352,4.81230102341015,4.85772842009873,3.21481443702443,2.76701444562566,1.28528526568723,3.12268187458191,4.62970569534864,5.70104357737516,3.29940245945071,0,3.64170954232472,3.32555912661226,1.69744571780308,1.47650946440386,3.07435147943927,2.32585463851399,2.90826983582004,1.42598951353889,1.58018378967908,4.21674434299995,1.03135543248187,2.7235168460303,3.78128297465751,2.71653235943784,4.28674070063185,4.61084607469911,4.63758925765383,4.44282355625727,3.04464949114599,1.87737366450968,3.81297727554876,1.54369878638473,2.96795255294664,7.58882805470756,8.26287071515735,5.72987251215055,7.2221995887827,0.874442509889552,4.63563255026274,0.683483523191411,4.12773735926445,1.29636169158798,1.50694765603753,0.683471138605126,0.686334519619568,1.69978429993855,1.81936888020755,1.38199973804424,0,6.01038387804157,3.65975040828328,4.32021363287205,6.06356058441959,4.36725127492355,4.04593039154462,4.46328660916814,0.785267825952089,1.42576470620972,0,9.58277995763124,3.88743019714345,3.30916980914195,5.44463327363333,3.7456348808542,4.22390313726945,4.10750335260139,5.59878854828985,6.29156066554265,3.38217769156408,4.89651010638371,4.74016680942267,3.44632865993279,3.59488350076895,3.50786222040047,4.11761400035207,3.9736270956253,6.00977247599844,6.4983391956814,6.5628192466296,8.53516234535998,7.56196388526304,7.79663045918019,6.5424052315424,7.94762934834669,3.17422537061296,1.10992976687032,0.538283139656854,2.51826924546118,3.28422309854724,2.25218970541418,3.29672923681077,1.92931541171159,0.501572104035363,3.3885110557024,2.30162618253588,1.71868654031819,1.89038500578056,4.11049511862385,6.7985450765073,1.35004500046361,2.2516060161211,2.71885445390523,3.62432218226274,3.94391920819871,5.58634822761443,5.9756762013947,5.10524105843418,5.24032906569956,4.04455718590031,4.4449345560323,2.06035057238894,4.49286893428541,4.29585259998456,3.8021894983536,3.77252682772152,3.183811253976,3.52138338226781,3.73330548211486,5.23923060411381,6.14186927507734,4.24400285020151,3.29668720642645,3.97437084362873,1.71434626192708,4.61437096014278,2.62279808942053,3.92435324907287,4.51725025993587,5.07687647350059,3.65855945745545,3.15683653725411,1.49384525230448,3.92799590160417,5.57584585183618,4.92522411877817,6.13846564754534,4.80304207676495,5.5942917184531,6.74488560432454,3.27504251823572,3.65280791882107,3.44318997723918,3.08827986767322,1.39120701372253
|short_description=p3@Agl
}}

Latest revision as of 12:14, 1 October 2015

Short description:p3@Agl
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Agl_5end
Coexpression cluster:NA
Association with transcript: -52bp_to_ENSMUST00000040603, NM_001081326, uc008rcq.1, uc008rcs.1, uc012cwu.1_5end
EntrezGene:Agl
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Agl

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.03
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.04
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.70
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.01
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.74
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.06
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.40
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.15
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.67
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H33.14
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G94.12
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.73
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H43.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.64
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.33
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.02
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B74.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.54
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.94
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.94
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.51
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.35
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.80
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.58
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C310.52
Mouse Granule cells, donor2.CNhs12357.11731-123E37.93
Mouse Granule cells, donor3.CNhs12108.11636-122C78.24
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.37
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D510.68
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F58.51
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D99.46
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.52
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D29.06
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F28.63
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D610.11
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.62
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D48.05
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F48.42
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D88.33
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.14
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.26
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.12
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.41
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.64
Mouse Schwann, donor1.CNhs12507.11728-123D91.74
Mouse Schwann, donor2.CNhs12573.11746-123F92.27
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.97
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.19
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.83
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.07
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.81
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D71.19
adrenal gland, embryo E14.CNhs11038.406-44C52.60
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I12.54
adrenal gland, embryo E18.CNhs11026.1262-18F51.06
adrenal gland, neonate N00.CNhs11191.1311-23C11.76
adrenal gland, neonate N25.CNhs11223.1377-27I31.13
amnion, adult pregnant day17.5.CNhs10488.583-22A84.45
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F54.21
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B22.64
cerebellum, neonate N30.CNhs11135.1395-42I21.47
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.40
corpora quadrigemina, adult.CNhs10501.16-22A45.09
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F19.93
cortex, adult.CNhs10473.12-14D53.82
cortex, neonate N30.CNhs11107.1392-42F23.07
diencephalon, adult.CNhs10482.20-12F22.70
diencephalon, neonate N30.CNhs11201.1388-42B24.54
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B15.50
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.24
epididymis, adult.CNhs10490.58-23B22.02
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C63.90
eyeball, embryo E14.CNhs10521.399-16E22.76
eyeball, embryo E15.CNhs10593.426-16C94.32
eyeball, embryo E17.CNhs11023.1261-18D43.32
eyeball, neonate N00.CNhs11207.633-15C64.97
eyeball, neonate N01.CNhs11140.1532-43E72.95
eyeball, neonate N02.CNhs11205.1551-44G83.47
eyeball, neonate N16.CNhs11188.777-19A22.07
forelimb, embryo E11.CNhs10596.335-25E21.72
forelimb, embryo E12.CNhs10600.359-14H25.11
forelimb, embryo E13.CNhs10589.384-1E27.92
forelimb, embryo E14.CNhs10577.413-26A87.01
forelimb, embryo E15.CNhs11007.437-20E79.45
forelimb, embryo E17.CNhs10598.1517-43C43.83
forelimb, embryo E18.CNhs11008.1520-43B53.91
gonad, embryo E13.CNhs11044.1564-45I63.98
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.14
heart, embryo E11.CNhs10586.331-24E94.35
heart, embryo E12.CNhs11015.353-12F53.99
heart, embryo E13.CNhs11013.376-3I93.24
heart, embryo E14.CNhs10597.403-26D43.08
heart, embryo E15.CNhs11017.431-16C82.36
heart, embryo E16.CNhs11021.457-17C62.01
heart, embryo E17.CNhs11025.479-18E52.56
heart, embryo E18.CNhs11030.1283-20G32.15
heart, neonate N00.CNhs11213.639-21E32.80
heart, neonate N03.CNhs11221.1349-25I22.96
heart, neonate N10.CNhs11118.749-24G10.99
heart, neonate N16.CNhs11209.782-15G11.46
heart, neonate N20.CNhs11127.821-26I61.02
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.94
hippocampus, adult.CNhs10478.13-16E83.15
hippocampus, neonate N00.CNhs11228.627-43G17.51
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I54.91
intestine, embryo E13.CNhs11010.381-16D55.34
intestine, embryo E15.CNhs10602.976-16D83.09
intestine, embryo E16.CNhs10585.463-22H43.83
intestine, embryo E17.CNhs10582.482-18D32.89
intestine, embryo E18.CNhs10526.1289-20F74.57
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E92.64
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F23.78
intestine, neonate N10.CNhs11098.755-23A52.53
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G11.00
kidney, embryo E14.CNhs10606.411-4I91.33
kidney, embryo E15.CNhs10997.434-16F82.28
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I23.46
kidney, embryo E18.CNhs11001.1288-20C74.27
kidney, neonate N00.CNhs11214.646-21G74.70
kidney, neonate N10.CNhs11206.758-6D53.92
kidney, neonate N20.CNhs11113.832-19I12.07
kidney, neonate N25.CNhs11122.1353-25F32.20
kidney, neonate N30.CNhs11203.1385-42H11.97
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F81.17
liver, embryo E13.CNhs10524.378-3H61.77
liver, embryo E14.CNhs10594.409-16E12.92
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G21.65
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G23.98
lung, embryo E14.CNhs10604.404-26F83.91
lung, embryo E15.CNhs11020.432-17C52.89
lung, embryo E16.CNhs10998.458-17B63.05
lung, embryo E17.CNhs10605.480-44A63.18
lung, embryo E18.CNhs10583.1287-20I62.86
lung, neonate N00.CNhs11224.640-42C63.32
lung, neonate N06.CNhs11212.683-20E51.58
lung, neonate N07.CNhs11111.715-19A33.32
lung, neonate N10.CNhs11219.750-23E61.91
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C71.55
lung, neonate N30.CNhs11133.1394-42H21.45
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.26
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C23.85
medulla oblongata, neonate N30.CNhs11200.1396-42A34.57
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C77.38
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.77
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.79
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.12
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.59
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D74.30
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.12
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.81
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.86
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.21
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.77
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I73.12
ovary, embryo E18.CNhs11040.505-44H74.63
ovary, neonate N00.CNhs11217.1299-22I45.70
oviduct, adult pregnant day01.CNhs10500.988-6G63.30
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F43.64
pancreas, embryo E15.CNhs11042.1556-45F23.33
pancreas, embryo E16.CNhs11003.460-26E51.70
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I73.07
pancreas, neonate N00.CNhs11105.645-26G92.33
pancreas, neonate N01.CNhs11138.1531-43D72.91
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G82.72
pituitary gland, embryo E12.CNhs11018.346-16E63.78
pituitary gland, embryo E13.CNhs11009.370-44C72.72
pituitary gland, embryo E14.CNhs11037.398-44A54.29
pituitary gland, embryo E15.CNhs10592.427-16B94.61
pituitary gland, embryo E16.CNhs11036.449-43F64.64
pituitary gland, embryo E17.CNhs11039.1265-44F54.44
pituitary gland, neonate N00.CNhs11190.1308-22E93.04
placenta, adult pregnant day10.CNhs10472.539-13I71.88
placenta, adult pregnant day17.CNhs10464.577-18G33.81
prostate, adult.CNhs10470.859-1F81.54
skin, adult.CNhs10492.30-1C32.97
skin, neonate N00.CNhs11124.650-25G47.59
skin, neonate N03.CNhs11215.662-22H38.26
skin, neonate N06.CNhs11097.693-20I55.73
skin, neonate N10.CNhs11108.762-6C47.22
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C94.64
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C14.13
spleen, embryo E18.CNhs11011.1271-21F21.30
spleen, neonate N10.CNhs11116.752-24D11.51
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.82
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.38
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E36.01
stomach, embryo E15.CNhs10603.1252-16G83.66
stomach, embryo E16.CNhs11022.459-17D44.32
stomach, embryo E17.CNhs11006.1035-18D56.06
stomach, embryo E18.CNhs10999.1286-20C64.37
stomach, neonate N03.CNhs11193.1340-24B84.05
stomach, neonate N07.CNhs11210.718-18A94.46
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I11.43
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G59.58
testis, embryo E13.CNhs11031.389-23F53.89
testis, embryo E15.CNhs11034.443-27C53.31
testis, embryo E16.CNhs11033.470-26G55.44
testis, embryo E17.CNhs11029.486-18I53.75
testis, embryo E18.CNhs11027.503-18G54.22
testis, neonate N00.CNhs11189.1300-22B74.11
testis, neonate N07.CNhs11222.726-26I45.60
testis, neonate N10.CNhs11204.763-44D96.29
testis, neonate N20.CNhs11110.839-18H33.38
testis, neonate N30.CNhs11130.1391-42E24.90
thymus, adult.CNhs10471.38-12B54.74
thymus, embryo E14.CNhs11041.402-44I43.45
thymus, embryo E15.CNhs11005.430-45I23.59
thymus, embryo E16.CNhs11002.456-26C53.51
thymus, embryo E17.CNhs10581.478-18C14.12
thymus, embryo E18.CNhs10595.1273-19G43.97
thymus, neonate N02.CNhs11181.1541-43F86.01
thymus, neonate N03.CNhs11137.2104-43C76.50
thymus, neonate N06.CNhs11197.681-26C46.56
thymus, neonate N07.CNhs11211.713-19D38.54
thymus, neonate N10.CNhs11194.748-24E47.56
thymus, neonate N20.CNhs11186.820-7A27.80
thymus, neonate N25.CNhs11125.1362-25G76.54
thymus, neonate N30.CNhs11132.1393-42G27.95
tongue, adult.CNhs10499.32-1B43.17
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.54
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.52
urinary bladder, adult.CNhs10481.879-12E43.28
uterus, adult pregnant day19.CNhs10497.590-15F52.25
uterus, adult.CNhs10509.92-27E53.30
vagina, adult.CNhs10502.89-27D51.93
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.89
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.80
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I83.94
whole body, embryo E12.CNhs10587.857-27C95.59
whole body, embryo E13.CNhs10512.372-23H25.98
whole body, embryo E14.5.CNhs10578.420-27D25.11
whole body, embryo E14.CNhs10519.395-14B15.24
whole body, embryo E16.CNhs10514.453-14F24.04
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.30
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.18
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.52
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.73
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.14
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.24
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.97
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.61
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.92
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.52
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.66
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.16
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.58
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.93
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.14
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.80
whole body, embryo E17.5.CNhs10513.490-9F95.59
whole body, embryo E17.CNhs10517.475-3I56.74
whole body, embryo E18.CNhs10516.493-3B33.28
whole body, neonate N00.CNhs10525.657-19C23.65
whole body, neonate N01.CNhs10576.659-23C63.44
whole body, neonate N06.CNhs10515.692-21D13.09
whole body, neonate N10.CNhs10518.761-6B41.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.17e-1323
neuroblast (sensu Vertebrata)2.17e-1323
neuron9.41e-1333
neuronal stem cell9.41e-1333
neuroblast9.41e-1333
electrically signaling cell9.41e-1333
electrically responsive cell3.22e-1039
electrically active cell3.22e-1039
ectodermal cell1.26e-0844
neurectodermal cell1.26e-0844
neural cell2.68e-0843

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure4.54e-1095
ectoderm4.54e-1095
presumptive ectoderm4.54e-1095
central nervous system1.12e-0973
ecto-epithelium2.71e-0973
nervous system2.95e-0975
regional part of nervous system3.72e-0954
neural tube2.52e-0852
neural rod2.52e-0852
future spinal cord2.52e-0852
neural keel2.52e-0852
neurectoderm3.28e-0864
neural plate3.28e-0864
presumptive neural plate3.28e-0864
gray matter2.88e-0734
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