FFCP PHASE1:Hg19::chr7:92747245..92747252,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54809 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1348 | |||
|TSSclassifier=strong | |||
|UniProt=C9JKF1 | |||
|association_with_transcript=22bp_to_ENST00000446617_5end | |||
|cluster_id=chr7:92747245..92747252,- | |||
|coexpression_cluster_id=C3460 | |||
|description=CAGE_peak_3_at_SAMD9_5end | |||
|id=chr7:92747245..92747252,- | |||
|ontology_enrichment_celltype=CL:0002087!6.76e-32!119;CL:0000738!1.20e-31!140;CL:0002031!6.10e-30!124;CL:0000037!3.53e-27!172;CL:0000566!3.53e-27!172;CL:0002032!9.18e-27!165;CL:0000837!9.18e-27!165;CL:0000988!3.23e-26!182;CL:0002057!4.31e-22!42;CL:0000766!1.11e-21!76;CL:0000860!1.36e-19!45;CL:0002194!2.68e-18!63;CL:0000576!2.68e-18!63;CL:0000040!2.68e-18!63;CL:0000559!2.68e-18!63;CL:0000839!6.49e-18!70;CL:0000557!2.08e-17!71;CL:0002009!3.29e-17!65;CL:0000763!2.33e-14!112;CL:0000049!2.33e-14!112;CL:0000838!7.89e-13!52;CL:0000542!2.41e-12!53;CL:0000051!2.41e-12!53;CL:0000134!2.63e-09!358;CL:0002320!1.84e-08!365;CL:0000791!9.17e-08!18;CL:0000789!9.17e-08!18;CL:0002420!9.17e-08!18;CL:0002419!9.17e-08!18;CL:0000790!9.17e-08!18;CL:0000084!4.27e-07!25;CL:0000827!4.27e-07!25;CL:0000219!6.06e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.06e-37;33!CL:0002057;5.06e-37;33!CL:0000473;1.83e-25;39!CL:0000234;1.83e-25;39!CL:0000576;4.58e-19;48!CL:0000766;1.80e-13;69!CL:0000775;3.36e-12;3!CL:0002087;4.64e-08;104!CL:0000094;1.59e-07;8!CL:0000763;3.41e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.76e-34,42;CL:0002057,1.76e-34,42;CL:0000473,1.95e-29,48;CL:0000234,1.95e-29,48;CL:0000766,3.91e-28,72;CL:0000738,2.08e-22,136;CL:0002194,2.18e-22,59;CL:0000576,2.18e-22,59;CL:0000040,2.18e-22,59;CL:0000559,2.18e-22,59;CL:0000839,1.29e-21,66;CL:0002009,1.76e-21,61;CL:0000557,3.29e-21,67;CL:0002031,1.32e-19,120;CL:0002087,4.02e-19,115;CL:0002032,1.36e-17,161;CL:0000837,1.36e-17,161;CL:0000763,1.62e-16,108;CL:0000049,1.62e-16,108;CL:0000037,1.67e-16,168;CL:0000988,3.13e-15,177;CL:0000775,3.33e-12,3;CL:0000094,1.67e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.97e-24;42!CL:0000049;7.16e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.86e-23!102;UBERON:0003061!2.86e-23!102;UBERON:0002193!6.10e-23!112;UBERON:0002371!6.71e-15!80;UBERON:0001474!1.18e-12!86;UBERON:0004765!4.77e-11!101;UBERON:0001434!4.77e-11!101;UBERON:0002405!6.76e-11!115;UBERON:0000178!2.86e-08!15;UBERON:0000179!2.86e-08!15;UBERON:0000463!2.86e-08!15;UBERON:0002384!2.39e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.57e-10;15!UBERON:0000179;4.57e-10;15!UBERON:0000463;4.57e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.08e-24,98;UBERON:0003061,9.08e-24,98;UBERON:0002193,1.51e-22,108;UBERON:0002371,4.94e-18,76;UBERON:0001474,2.65e-16,82;UBERON:0002405,3.85e-15,93;UBERON:0004765,2.33e-14,90;UBERON:0001434,2.27e-12,100;UBERON:0000178,4.03e-10,15;UBERON:0000179,4.03e-10,15;UBERON:0000463,4.03e-10,15;UBERON:0003081,1.50e-08,203 | |||
|phase1_expression=0.363356758541113,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.328402357799783,0.314843125254717,0,0.383829398097213,0.154816123316076,0,0,0,0.387336002901508,0,0.293600439334847,0,0.401088894940283,0.217010870715852,0.671746422719773,0.32389366601898,0.257575567634187,0.726991193897824,0,1.94067248950253,0.464858073811369,0,0.619412741790207,3.74000110018796,1.2808035326455,2.12834006899727,1.37898272294647,1.29096936716765,0,0.752969358170419,0,1.12361742222542,5.20342617030534,1.28371610830437,0,4.94776950280074,5.38551875578406,3.40979800426155,5.5139755339431,1.70215567407342,1.24564449799115,2.51248665256743,1.5644487552606,5.2125322729228,4.84319602106695,3.68277635987565,10.7597211729901,0.211255286311942,1.06302149982522,0.209658645508376,0.673971786878971,0.300353785683013,0.964353520182481,0.855038231223746,0.39783335439818,0.547992461293902,1.75996244461323,1.63841583378639,0,0.853460445133014,0.400395987036012,0.574752439954483,1.32208974556972,1.90810750907073,0,0.587237189370939,0.382273228125229,1.32171328579026,0,0.526768169550154,0.983548850569165,0.393010762749165,0.822405995998037,0.334372990781356,0.977766799900771,0,0,1.22551502573691,1.47302953737419,1.77227115666897,1.35401931882508,0.640456598628376,2.21100890851793,0.328875809207352,0.276350017785848,0,0.296573126324121,0.267540828089713,0,0.339928028092699,0.383220493601921,0.68725489096526,0.506039384039006,0.637130828648193,0,0.950452044448374,0.301150238155546,0.895906278080929,0,0.947109008176067,0,2.01606743224732,0.534880391567015,0.144824403882799,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0,0.324547393654683,0.522389211897802,0.664789802594326,0.238490624305342,0,0,0,0,0,0,0,0.550236083880135,0,0,0,0.66944122552934,0,0,0.24406205754817,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0.25326102332916,0,0.286836620748814,0,0,0,0.24666754841716,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0.204154171254893,0,0.103325781175765,1.18800285728205,0.247266929278557,0,0,0,0,0,0,0,0.300476117813194,0,0.179389635688862,0,0.211931901159562,0.600182192168805,0,0,0,0.168776332241266,0,0,0,0,0,0.201504196455281,0.169560592310488,0.193260853163297,0.818238361772504,0,0,0,0,0,0,0,0,1.28648187638577,0,0,0,0.118306800039844,0.505754070234305,0,0.110293972732394,0,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0,0.148631162288728,0,0.335964256397719,0.283550194484773,0,0,0,7.38994856843915,0.528290604079356,0,0,0.37872730027914,0.063497894292169,0,0,0,0,0.300343057843917,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599837947092342,0,0,0,0,0,0,0.144781306667579,0,0,0.112085143993527,1.57624608161542,0.646882724578552,0.641715181398742,0,0,0,0,0,8.23907726341901,8.97484377612075,7.87389475528467,0,0,0,0,0.356857977594324,0.157702415033935,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0.206768026122887,0.431428401637234,0.213455115606889,0,0,0,0,0.153461973288062,0,0,0.511707249066704,0.160853921143607,0,0.154209693802656,0,0.246381468041427,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0.193341436584244,0,0,0,0.107420244868274,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0.318203247925937,0,0.179872457583315,0,0,0,0,0,0,2.19342140668156,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0,0,0,0,0.229723400206959,1.01489521846434,2.29391162142713,1.13929437434833,1.66762242820452,1.64544909234478,1.94541993357815,3.24018862342869,0,0,0,0.490080431962063,0,0,0,0,0,0,0.211673582723883,0,0.280797178113459,0.684704037099577,0,0,0.169291777801603,0.321176150207399,0,0.425846237690326,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0,2.22886768554957,0,0,0,0,0,0,0,0.329607748453519,0,0.19924798825107,0,0,0,0.369254416383208,0,0.0898683511473268,0.358042349351218,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.307801034015188,0,0,0,0,0,0,0,0,0.156980256395025,0.166211681900156,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0.593042257361244,0.741383633679017,0.417687798021821,0,0,0.234264445725339,0,0,0,0,0,0,0.126373159256976,0.60129367765797,0,0,0,0,0,0.284609546029793,0,0,0.783939179315021,2.35059857767087,0.17472666824203,0,0,0,0,1.35784623083787,0,0.225980740780532,0,0,0,2.15106521008283,0.160317640503067,0,0,0,0,0,0,0,0.235694034616795,0,0.104602846312333,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0.574647645245373,0,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,1.48849806543585,0,0,2.55336503108073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0,0,0.189403005275089,0,0,0.228840068396924,0,0,0,0.159296767163702,0.449803112163605,0.155262956876259,0.829412415681711,0.53168342911599,0,0,0.380805212168795,0.40687073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| |||
|short_description=p3@SAMD9 | |||
}} |
Latest revision as of 00:59, 20 September 2015
Short description: | p3@SAMD9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SAMD9_5end |
Coexpression cluster: | C3460_Mast_CD14_malignant_Neutrophils_epidermoid_Smooth_squamous |
Association with transcript: | 22bp_to_ENST00000446617_5end |
EntrezGene: | SAMD9 |
HGNC: | 1348 |
UniProt: | C9JKF1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.76e-34 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.76e-34 | 42 |
defensive cell | 1.95e-29 | 48 |
phagocyte | 1.95e-29 | 48 |
myeloid leukocyte | 3.91e-28 | 72 |
leukocyte | 2.08e-22 | 136 |
monopoietic cell | 2.18e-22 | 59 |
monocyte | 2.18e-22 | 59 |
monoblast | 2.18e-22 | 59 |
promonocyte | 2.18e-22 | 59 |
myeloid lineage restricted progenitor cell | 1.29e-21 | 66 |
macrophage dendritic cell progenitor | 1.76e-21 | 61 |
granulocyte monocyte progenitor cell | 3.29e-21 | 67 |
hematopoietic lineage restricted progenitor cell | 1.32e-19 | 120 |
nongranular leukocyte | 4.02e-19 | 115 |
hematopoietic oligopotent progenitor cell | 1.36e-17 | 161 |
hematopoietic multipotent progenitor cell | 1.36e-17 | 161 |
myeloid cell | 1.62e-16 | 108 |
common myeloid progenitor | 1.62e-16 | 108 |
hematopoietic stem cell | 1.67e-16 | 168 |
hematopoietic cell | 3.13e-15 | 177 |
neutrophil | 3.33e-12 | 3 |
granulocyte | 1.67e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.08e-24 | 98 |
blood island | 9.08e-24 | 98 |
hemolymphoid system | 1.51e-22 | 108 |
bone marrow | 4.94e-18 | 76 |
bone element | 2.65e-16 | 82 |
immune system | 3.85e-15 | 93 |
skeletal element | 2.33e-14 | 90 |
skeletal system | 2.27e-12 | 100 |
blood | 4.03e-10 | 15 |
haemolymphatic fluid | 4.03e-10 | 15 |
organism substance | 4.03e-10 | 15 |
lateral plate mesoderm | 1.50e-08 | 203 |