FFCP PHASE1:Mm9::chr4:102297935..102297947,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=142|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:102297935..102297947,+|id=chr4:102297935..102297947,+|ontology_enrichment_celltype=CL:0000049!2.08e-15!19;CL:0000988!2.02e-11!32;CL:0002032!2.02e-11!32;CL:0000037!2.02e-11!32;CL:0000566!2.02e-11!32;CL:0000837!2.02e-11!32;CL:0000553!1.26e-10!6;CL:0000556!1.26e-10!6;CL:0000763!1.51e-09!16;CL:0002320!4.13e-07!46;CL:0000134!4.13e-07!46;CL:0000050!5.65e-07!9|ontology_enrichment_celltype_v019_2=CL:0000049,1.27e-12,19;CL:0000557,2.89e-09,7;CL:0000988,2.24e-07,32;CL:0002032,2.24e-07,32;CL:0000037,2.24e-07,32;CL:0000837,2.24e-07,32;CL:0000034,2.46e-07,97;CL:0000355,2.66e-07,9|ontology_enrichment_disease=DOID:0060100!3.11e-09!3;DOID:4045!3.11e-09!3|ontology_enrichment_disease_v019_2=DOID:0060100,9.96e-21,3;DOID:4045,9.96e-21,3;DOID:0050686,1.10e-10,6|ontology_enrichment_uberon=UBERON:0002371!1.51e-09!16;UBERON:0002204!3.60e-08!32;UBERON:0002384!4.13e-07!46|ontology_enrichment_uberon_v019_2=UBERON:0002204,2.65e-07,32;UBERON:0001134,2.66e-07,9;UBERON:0002036,2.66e-07,9;UBERON:0002385,2.66e-07,9;UBERON:0000486,2.66e-07,9;UBERON:0007503,2.66e-07,9;UBERON:0001015,2.66e-07,9;UBERON:0002329,2.66e-07,9;UBERON:0003082,2.66e-07,9;UBERON:0003059,2.66e-07,9;UBERON:0007282,2.66e-07,9;UBERON:0004290,2.66e-07,9;UBERON:0009618,2.66e-07,9|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0.630924330716475,0.959801035240171,0.42438965179803,0,0.0992909512008853,0,0.159992422793407,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,1.25559489221072,2.3440060335714,1.57057123192139,0.588231488031014,22.5405010036287,1.94204141212461,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.776813650941515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.31334448221313,1.19980546198682,2.92261522268049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51106593656617,1.28673953557358,1.42081749697796,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0.268412837520744,0,0,0.330418782983798,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0,0,0,0,0,0,0,0,0,0,0,0,1.5298058699447,1.95932033253121,0.967399816630967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr4:102297935..102297947,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=142 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:102297935..102297947,+ | |||
|description=CAGE_peak_at_chr4:102297935..102297947,+ | |||
|id=chr4:102297935..102297947,+ | |||
|ontology_enrichment_celltype=CL:0000049!2.08e-15!19;CL:0000988!2.02e-11!32;CL:0002032!2.02e-11!32;CL:0000037!2.02e-11!32;CL:0000566!2.02e-11!32;CL:0000837!2.02e-11!32;CL:0000553!1.26e-10!6;CL:0000556!1.26e-10!6;CL:0000763!1.51e-09!16;CL:0002320!4.13e-07!46;CL:0000134!4.13e-07!46;CL:0000050!5.65e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,1.27e-12,19;CL:0000557,2.89e-09,7;CL:0000988,2.24e-07,32;CL:0002032,2.24e-07,32;CL:0000037,2.24e-07,32;CL:0000837,2.24e-07,32;CL:0000034,2.46e-07,97;CL:0000355,2.66e-07,9 | |||
|ontology_enrichment_disease=DOID:0060100!3.11e-09!3;DOID:4045!3.11e-09!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,9.96e-21,3;DOID:4045,9.96e-21,3;DOID:0050686,1.10e-10,6 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.51e-09!16;UBERON:0002204!3.60e-08!32;UBERON:0002384!4.13e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,2.65e-07,32;UBERON:0001134,2.66e-07,9;UBERON:0002036,2.66e-07,9;UBERON:0002385,2.66e-07,9;UBERON:0000486,2.66e-07,9;UBERON:0007503,2.66e-07,9;UBERON:0001015,2.66e-07,9;UBERON:0002329,2.66e-07,9;UBERON:0003082,2.66e-07,9;UBERON:0003059,2.66e-07,9;UBERON:0007282,2.66e-07,9;UBERON:0004290,2.66e-07,9;UBERON:0009618,2.66e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0.630924330716475,0.959801035240171,0.42438965179803,0,0.0992909512008853,0,0.159992422793407,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,1.25559489221072,2.3440060335714,1.57057123192139,0.588231488031014,22.5405010036287,1.94204141212461,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.776813650941515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.31334448221313,1.19980546198682,2.92261522268049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51106593656617,1.28673953557358,1.42081749697796,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0.268412837520744,0,0,0.330418782983798,0,0,0,0,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0,0,0,0,0,0,0,0,0,0,0,0,1.5298058699447,1.95932033253121,0.967399816630967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:102297935..102297947,+ | |||
}} |
Latest revision as of 11:08, 4 August 2015
Short description: | p@chr4:102297935..102297947, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:102297935..102297947, + |
Coexpression cluster: | MCL_coexpression_mm9:142 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 1.27e-12 | 19 |
granulocyte monocyte progenitor cell | 2.89e-09 | 7 |
hematopoietic cell | 2.24e-07 | 32 |
hematopoietic oligopotent progenitor cell | 2.24e-07 | 32 |
hematopoietic stem cell | 2.24e-07 | 32 |
hematopoietic multipotent progenitor cell | 2.24e-07 | 32 |
stem cell | 2.46e-07 | 97 |
multi-potent skeletal muscle stem cell | 2.66e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 2.65e-07 | 32 |
skeletal muscle tissue | 2.66e-07 | 9 |
striated muscle tissue | 2.66e-07 | 9 |
muscle tissue | 2.66e-07 | 9 |
multilaminar epithelium | 2.66e-07 | 9 |
epithelial vesicle | 2.66e-07 | 9 |
musculature | 2.66e-07 | 9 |
somite | 2.66e-07 | 9 |
myotome | 2.66e-07 | 9 |
presomitic mesoderm | 2.66e-07 | 9 |
presumptive segmental plate | 2.66e-07 | 9 |
dermomyotome | 2.66e-07 | 9 |
trunk paraxial mesoderm | 2.66e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 9.96e-21 | 3 |
muscle cancer | 9.96e-21 | 3 |
organ system cancer | 1.10e-10 | 6 |