FFCP PHASE1:Hg19::chr8:144640479..144640488,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79792 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25697 | |||
|TSSclassifier=strong | |||
|UniProt=P57764 | |||
|association_with_transcript=2bp_to_ENST00000262580,NM_024736_5end | |||
|cluster_id=chr8:144640479..144640488,+ | |||
|description=CAGE_peak_2_at_GSDMD_5end | |||
|id=chr8:144640479..144640488,+ | |||
|ontology_enrichment_celltype=CL:0002078!1.31e-08!44;CL:0000222!1.72e-08!119;CL:0000115!9.17e-08!35;CL:0000213!2.05e-07!57;CL:0000215!2.05e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000115;1.57e-07;36!CL:1000449;2.13e-07;15!CL:0002078;7.02e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.30e-08,36;CL:0002078,1.48e-08,45;CL:1000449,1.37e-07,15;CL:0000222,3.18e-07,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!5.01e-08!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;2.13e-07;15!UBERON:0004819;2.13e-07;15!UBERON:0001285;2.13e-07;15!UBERON:0007684;2.13e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,1.37e-07,15;UBERON:0009773,1.37e-07,15;UBERON:0001231,1.37e-07,15;UBERON:0001285,1.37e-07,15;UBERON:0007684,1.37e-07,15;UBERON:0004208,1.37e-07,15;UBERON:0003914,1.64e-07,117;UBERON:0006555,6.09e-07,16;UBERON:0004819,6.09e-07,16 | |||
|phase1_expression=0.54503513781167,0.856402095563933,0.140954404095971,3.00219895059391,1.78784437770915,0,0,0,1.04474251279935,0.245733936501509,4.18680700783456,0.218441372130172,1.31883489114227,1.73272894144065,3.97676850873499,0.672325146451775,0,0,0,0.123121058076788,1.02000345622126,0.626909442956176,0,0.273748850145768,0.627713197974014,0.152826811495903,0.246301768349837,0.0787107813136792,0,0.383829398097213,0.154816123316076,0,1.8072355126695,1.10926203050036,0.0774672005803016,0.142169232487422,1.76160263600908,0,0,0.217010870715852,1.11957737119962,0.647787332037959,0.77272670290256,0.290796477559129,0,0,0,0,0,0.28769239232215,0,0.236482229888585,0,0,1.35426486594342,0.376484679085209,0.545812300115692,0,0,0,0,0.329851300186716,0.398927315243264,0.426224750532694,0.290209238628584,0,0,0,0,0.217188844705117,0,0.368277635987565,0,0.633765858935825,0.425208599930087,0.209658645508376,0.673971786878971,0.600707571366025,0,0.570025487482497,0.19891667719909,0.365328307529268,1.75996244461323,0,0.889509253863555,0.853460445133014,0,1.14950487990897,0.661044872784862,0.954053754535364,0,0.587237189370939,0,0,0.560508562981536,1.05353633910031,0,0,0,0.501559486172034,1.30368906653436,1.89379122293893,0,0.668462741311041,0.589211814949674,0.443067789167242,0.270803863765016,0.640456598628376,1.04047478047903,0.493313713811028,0.552700035571697,0.289803085735052,0.593146252648242,0,0,0.566546713487831,1.53288197440768,2.40539211837841,1.26509846009751,0.637130828648193,1.30216690771284,0.950452044448374,0.752875595388864,0.383959833463255,0,0.947109008176067,0.821127996921047,0.201606743224732,0.267440195783507,0.289648807765598,2.43806866313962,1.34140171940727,0.383587685530591,0.722878304769133,2.00535164254356,1.15877215168659,0,0.973269740605272,0.567208902984407,1.55210578223795,0.527008714158756,0.785874452986276,1.45718115317017,0.370784442784429,1.29818957461873,0.870648686496336,1.19662164466979,0,0,0.371457501329565,1.78886166630035,4.30117297553062,1.38856200643038,0,1.25849830862972,2.75118041940067,1.04497483268405,1.29208379584664,0.71153252537342,0.33472061276467,0.805658634218294,2.28081631715554,2.4406205754817,0.735326160691737,3.24056779152704,1.07159673940896,0.44905874525234,0.900891843866578,6.13266549863533,0,0.916008719652036,0,0,0,1.49091585508596,0.759783069987479,0.794455084879313,0.860509862246441,1.06400514659507,1.12135520028461,0,0,0.311211035399766,0.942974704487816,0.490385709340376,0.908144565869588,0.576175924479999,0,0.936480230490962,1.1409436430889,0,0.822041490506354,1.13311061057692,0.842704840213491,0.816616685019573,0.737005903870608,0.309977343527296,1.18800285728205,1.23633464639278,0.910161361938026,0.718618141816238,0.673344455816265,0.250237039743928,0,0.438977620880838,2.45190236639216,1.05166641234618,1.02088964844019,1.25572744982203,0.640672166455702,0.423863802319124,2.40072876867522,0.618315175430633,1.28820270022815,0.558350568994769,1.68776332241266,0.779496041289589,2.27190396819703,0.552299391853796,0.484938170456436,0.710019185033229,0.604512589365842,0.508681776931463,0.386521706326594,0,1.14721838155602,0.121973706129595,0.397589304964456,0.116193942869518,0.10366105501537,0,0.36497735907583,4.69348596989448,0,0,0.464367928031979,1.44375896333917,0.946454400318751,0.337169380156203,0.241011029883482,0.441175890929576,0,0.237270619111097,0.134831308160164,0.196221465125346,0.38474715694639,0.738155454624648,0,0.4115740113314,8.82052268313252,2.53510069643662,0,0.590789906681404,0,0.122988438543114,0.686271241194102,0.109750285408626,0,0.100528972411631,0.0925884451585296,0.325808305310325,0,0,0.579652024875384,0.117408694235822,1.15493158208859,0.462985512576611,0.570762456703795,0,0,1.72351904261178,0.234004265139238,0.743155811443641,0.93733833986777,0.335964256397719,0.567100388969546,0.268675568108545,0,0.766765358330422,0,0.968532774145487,1.86595303986695,1.8735593944205,1.00993946741104,1.14296209725904,1.52795370223311,3.51652341630141,0,1.23392991243988,1.50171528921959,0.285826432630578,0.448524337381443,0,0.1466765716419,0.258543431515556,3.57656445851882,0,0,0,0,0,0.799266537048298,0.285955987316295,0.542621605391443,0,0.977208552881205,0,0.791951872933429,0.301439377059586,1.74306691720059,0.399891964728228,0,1.50677127429638,0,0,0,1.42636905040718,0.144781306667579,0.205476322550383,0.179060963239896,0.336255431980582,0.394061520403854,0,0,0.254094624222463,0,0,0.335032530668698,0,0,0,0,0.613457458595699,1.50051156317903,1.62759014219841,0.831883446123229,1.07057393278297,1.73472656537328,1.52283839490527,0.601892199455438,0,0,0.664225598535437,0.368738337083406,0.521301686808497,1.95801157462741,0.686286847621712,0.206768026122887,0.215714200818617,0.106727557803444,0.909382714338778,0,0.604780586659361,0,1.2276957863045,0.561320188866147,0.512556597022804,0.511707249066704,0.321707842287215,0,0.925258162815933,0.887808626565635,0.9033987161519,0,0.929683027679674,0,0.200506470303285,0,0.34444334449382,0.546273504020151,1.0489953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| |||
|short_description=p2@GSDMD | |||
}} |
Latest revision as of 22:31, 16 September 2015
Short description: | p2@GSDMD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_GSDMD_5end |
Coexpression cluster: | NA |
Association with transcript: | 2bp_to_ENST00000262580, NM_024736_5end |
EntrezGene: | GSDMD |
HGNC: | 25697 |
UniProt: | P57764 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.30e-08 | 36 |
meso-epithelial cell | 1.48e-08 | 45 |
epithelial cell of nephron | 1.37e-07 | 15 |
mesodermal cell | 3.18e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 1.37e-07 | 15 |
renal tubule | 1.37e-07 | 15 |
nephron tubule | 1.37e-07 | 15 |
nephron | 1.37e-07 | 15 |
uriniferous tubule | 1.37e-07 | 15 |
nephrogenic mesenchyme | 1.37e-07 | 15 |
epithelial tube | 1.64e-07 | 117 |
excretory tube | 6.09e-07 | 16 |
kidney epithelium | 6.09e-07 | 16 |