FFCP PHASE1:Mm9::chr4:147504884..147504939,+: Difference between revisions
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{{FFCP|EntrezGene=71890|HGNC=|MCL_coexpression_id=108|UniProt=Q9D752|association_with_transcript=-84bp_to_ENSMUST00000084129_5end|description=CAGE_peak_2_at_Mad2l2_5end|id=chr4:147504884..147504939,+|ontology_enrichment_celltype=CL:0000221!7.79e-13!44;CL:0000133!7.79e-13!44;CL:0002319!2.11e-12!43;CL:0000540!5.46e-11!33;CL:0000047!5.46e-11!33;CL:0000031!5.46e-11!33;CL:0000404!5.46e-11!33;CL:0000055!6.50e-09!50;CL:0000393!5.18e-08!39;CL:0000211!5.18e-08!39;CL:0000117!5.50e-08!23;CL:0000337!5.50e-08!23|ontology_enrichment_celltype_v019_2=CL:0000221,4.92e-13,44;CL:0000133,4.92e-13,44;CL:0002319,1.43e-12,43;CL:0000540,2.30e-11,33;CL:0000047,2.30e-11,33;CL:0000031,2.30e-11,33;CL:0000404,2.30e-11,33;CL:0000117,4.30e-08,23;CL:0000337,4.30e-08,23;CL:0000393,1.63e-07,39;CL:0000211,1.63e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!5.09e-12!102;UBERON:0000924!5.09e-12!102;UBERON:0006601!5.09e-12!102;UBERON:0001017!8.84e-11!73;UBERON:0005743!8.84e-11!73;UBERON:0000073!3.62e-10!75;UBERON:0001016!3.62e-10!75;UBERON:0002346!5.70e-10!71;UBERON:0003075!5.70e-10!71;UBERON:0007284!5.70e-10!71;UBERON:0003056!8.75e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.59e-11,95;UBERON:0000924,3.59e-11,95;UBERON:0006601,3.59e-11,95;UBERON:0001017,4.59e-11,73;UBERON:0001016,3.65e-10,75;UBERON:0002346,5.18e-10,64;UBERON:0003075,5.18e-10,64;UBERON:0007284,5.18e-10,64;UBERON:0010371,5.91e-09,73;UBERON:0003056,5.12e-07,49|phase1_expression=11.2104192973356,0.697950815278722,0.909998478779072,0,0,1.6787927191189,2.33612640595526,0.129123323441576,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,1.44573593256819,0.695036658406197,0.261199789138935,0.639969691173627,0.22940928106717,0.57423196411502,2.58457197695445,1.939241094173,0.570070258369122,0.252030129759931,0.221730510655305,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0.183546752161682,8.60630478782843,10.9012578190223,1.75748946187577,3.4997381833371,4.19959264876088,14.3752564364972,0,0,0,0.514518872071894,0.573066879877513,0.515672092277442,22.659443616275,20.1016572123373,22.8179305262225,3.72728985276045,1.77858959222228,0,0,0,18.2756067416227,30.7374644257244,18.1456821539836,19.3058491814318,18.718921560273,13.139945282575,10.8225585066291,19.5985278743926,16.9646483702278,20.2228133054205,0,0.766124028511126,0.614426133024974,26.6410301214992,20.3102568797349,26.045668527838,1.67509799400829,2.8138130501584,1.98637722109853,9.1334861496837,7.68807076315156,19.5719418116566,0.151452386666368,0.755715601067855,0.289864488701678,0,0,0,0,0,0.421333260395256,0.511290967734173,0.259786004602869,0.35333957451034,10.2815696436977,21.815501160434,48.4129955442627,14.2213340630666,0,0.506719730950197,0.505524445014783,1.59857431606684,2.33044095282455,0.742210695324124,4.51061849591953,6.39377504455497,4.61230994512117,2.86373017049983,2.82212897125692,0.376999773989026,1.73036477414062,0,0,1.45590164952668,0.883366073841574,1.93950101254089,0,0.585561594023094,1.46612694769419,0.510914110417183,0.838705871541442,0.599902730993408,0.762421362438388,2.39665023047716,0.457500602818626,24.8795617183472,0.521472960576829,1.02286182932132,1.66230435647648,1.62241263067758,2.85150218780886,1.7416975885413,2.52722758433675,0.841767423545896,21.4698730888461,16.0931473103431,15.48534316326,10.2479276128286,16.4648327946213,13.9643955110486,12.9308379892426,3.62184719034622,30.8262229893964,25.3402147424878,21.1141348996739,14.4669183402199,8.89751197521913,3.48252166522167,2.67516777330327,6.96619933864726,0,0,0,1.03562886267751,3.98694301967864,0.540186184383045,2.60419209143731,0.393528463494808,0.308534225774757,0.232533944750408,0,0.233530684734339,0.16455984991348,0.164167464079095,0.0810688095458557,0,0,0,2.73376933133365,26.2406761567175,0,0.264450566663544,7.67837701926842,3.48355007790658,4.89696353023955,3.22693639397348,2.44615848229357,2.09248188723815,0,0.823494773620054,2.01068167040216,0.596869416123452,0.58489226135736,0,0,0.199141273254367,14.035424670528,9.93962059704641,12.3978509240388,6.72049381889537,8.53390943537553,9.95928642442524,4.11037491307672,0.442830443938806,0.31399745568275,0.740382983530803,0.296452627087149,1.66845105716094,0.393117990226406,0.224862112384854,0.202860121388503,0.241177159752417,0.25462585178142,0.287696137450811,0,0,0,0.372140947668503,0,0,0,0,0.369506380333209,8.33762211790133,9.4519686336375,5.94107800213158,5.86725620721255,6.70025029767263,1.90434912708811,1.75620283072019,5.35959489961049,5.75808193086815,2.87018583583477,0.163863314715738,0.518054945597687,0.433947175744535,0,0,0,1.10374698521893,1.9266070798535,1.52375192569864,0,0,7.88770548540642,7.80877488593277,13.3562506594335,2.15071918157297,4.67877215573028,6.51076020814315,7.69140333182299,9.64444331107329,15.0209355619679,2.24924921495265,6.10342366395555,8.54714897602825,6.18970445543589,8.08353602565424,1.32745138339963,8.25454162926937,3.93020624054176,2.64047111658257,3.543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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=71890 | |||
|HGNC= | |||
|MCL_coexpression_id=108 | |||
|TSSclassifier=NA | |||
|UniProt=Q9D752 | |||
|association_with_transcript=-84bp_to_ENSMUST00000084129_5end | |||
|cluster_id=chr4:147504884..147504939,+ | |||
|description=CAGE_peak_2_at_Mad2l2_5end | |||
|id=chr4:147504884..147504939,+ | |||
|ontology_enrichment_celltype=CL:0000221!7.79e-13!44;CL:0000133!7.79e-13!44;CL:0002319!2.11e-12!43;CL:0000540!5.46e-11!33;CL:0000047!5.46e-11!33;CL:0000031!5.46e-11!33;CL:0000404!5.46e-11!33;CL:0000055!6.50e-09!50;CL:0000393!5.18e-08!39;CL:0000211!5.18e-08!39;CL:0000117!5.50e-08!23;CL:0000337!5.50e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,4.92e-13,44;CL:0000133,4.92e-13,44;CL:0002319,1.43e-12,43;CL:0000540,2.30e-11,33;CL:0000047,2.30e-11,33;CL:0000031,2.30e-11,33;CL:0000404,2.30e-11,33;CL:0000117,4.30e-08,23;CL:0000337,4.30e-08,23;CL:0000393,1.63e-07,39;CL:0000211,1.63e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!5.09e-12!102;UBERON:0000924!5.09e-12!102;UBERON:0006601!5.09e-12!102;UBERON:0001017!8.84e-11!73;UBERON:0005743!8.84e-11!73;UBERON:0000073!3.62e-10!75;UBERON:0001016!3.62e-10!75;UBERON:0002346!5.70e-10!71;UBERON:0003075!5.70e-10!71;UBERON:0007284!5.70e-10!71;UBERON:0003056!8.75e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.59e-11,95;UBERON:0000924,3.59e-11,95;UBERON:0006601,3.59e-11,95;UBERON:0001017,4.59e-11,73;UBERON:0001016,3.65e-10,75;UBERON:0002346,5.18e-10,64;UBERON:0003075,5.18e-10,64;UBERON:0007284,5.18e-10,64;UBERON:0010371,5.91e-09,73;UBERON:0003056,5.12e-07,49 | |||
|phase1_expression=11.2104192973356,0.697950815278722,0.909998478779072,0,0,1.6787927191189,2.33612640595526,0.129123323441576,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,1.44573593256819,0.695036658406197,0.261199789138935,0.639969691173627,0.22940928106717,0.57423196411502,2.58457197695445,1.939241094173,0.570070258369122,0.252030129759931,0.221730510655305,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0.251793635951155,0.202753862439029,0.183546752161682,8.60630478782843,10.9012578190223,1.75748946187577,3.4997381833371,4.19959264876088,14.3752564364972,0,0,0,0.514518872071894,0.573066879877513,0.515672092277442,22.659443616275,20.1016572123373,22.8179305262225,3.72728985276045,1.77858959222228,0,0,0,18.2756067416227,30.7374644257244,18.1456821539836,19.3058491814318,18.718921560273,13.139945282575,10.8225585066291,19.5985278743926,16.9646483702278,20.2228133054205,0,0.766124028511126,0.614426133024974,26.6410301214992,20.3102568797349,26.045668527838,1.67509799400829,2.8138130501584,1.98637722109853,9.1334861496837,7.68807076315156,19.5719418116566,0.151452386666368,0.755715601067855,0.289864488701678,0,0,0,0,0,0.421333260395256,0.511290967734173,0.259786004602869,0.35333957451034,10.2815696436977,21.815501160434,48.4129955442627,14.2213340630666,0,0.506719730950197,0.505524445014783,1.59857431606684,2.33044095282455,0.742210695324124,4.51061849591953,6.39377504455497,4.61230994512117,2.86373017049983,2.82212897125692,0.376999773989026,1.73036477414062,0,0,1.45590164952668,0.883366073841574,1.93950101254089,0,0.585561594023094,1.46612694769419,0.510914110417183,0.838705871541442,0.599902730993408,0.762421362438388,2.39665023047716,0.457500602818626,24.8795617183472,0.521472960576829,1.02286182932132,1.66230435647648,1.62241263067758,2.85150218780886,1.7416975885413,2.52722758433675,0.841767423545896,21.4698730888461,16.0931473103431,15.48534316326,10.2479276128286,16.4648327946213,13.9643955110486,12.9308379892426,3.62184719034622,30.8262229893964,25.3402147424878,21.1141348996739,14.4669183402199,8.89751197521913,3.48252166522167,2.67516777330327,6.96619933864726,0,0,0,1.03562886267751,3.98694301967864,0.540186184383045,2.60419209143731,0.393528463494808,0.308534225774757,0.232533944750408,0,0.233530684734339,0.16455984991348,0.164167464079095,0.0810688095458557,0,0,0,2.73376933133365,26.2406761567175,0,0.264450566663544,7.67837701926842,3.48355007790658,4.89696353023955,3.22693639397348,2.44615848229357,2.09248188723815,0,0.823494773620054,2.01068167040216,0.596869416123452,0.58489226135736,0,0,0.199141273254367,14.035424670528,9.93962059704641,12.3978509240388,6.72049381889537,8.53390943537553,9.95928642442524,4.11037491307672,0.442830443938806,0.31399745568275,0.740382983530803,0.296452627087149,1.66845105716094,0.393117990226406,0.224862112384854,0.202860121388503,0.241177159752417,0.25462585178142,0.287696137450811,0,0,0,0.372140947668503,0,0,0,0,0.369506380333209,8.33762211790133,9.4519686336375,5.94107800213158,5.86725620721255,6.70025029767263,1.90434912708811,1.75620283072019,5.35959489961049,5.75808193086815,2.87018583583477,0.163863314715738,0.518054945597687,0.433947175744535,0,0,0,1.10374698521893,1.9266070798535,1.52375192569864,0,0,7.88770548540642,7.80877488593277,13.3562506594335,2.15071918157297,4.67877215573028,6.51076020814315,7.69140333182299,9.64444331107329,15.0209355619679,2.24924921495265,6.10342366395555,8.54714897602825,6.18970445543589,8.08353602565424,1.32745138339963,8.25454162926937,3.93020624054176,2.64047111658257,3.54362271456927,2.76691633149535,2.84271122485043,3.63533729477506,1.42598951353889,0,0,1.03135543248187,1.02131881726136,13.5045820523483,20.3093133538925,13.5032332069903,11.5271151867478,9.81028496811388,8.39200005070817,7.61162372786498,6.10146440965647,1.27099242518292,1.10264199027481,0.98931751764888,2.74489525383039,1.62844897306021,0.835606408021955,0.328281799490123,0.291480836629851,1.29797711407357,0.341741761595705,2.68302928352189,0.370389054739423,0.376736914009382,0.410082683163076,0,1.69978429993855,0.69975726161829,0.552799895217695,0,13.1279437336171,7.9294592179471,3.67218158794124,4.39085421630384,3.05707589244649,1.07891477107857,1.57041565878138,0.523511883968059,0,1.24267862617385,0.56369293868419,6.13017838780313,2.81279433777066,1.55560950675238,1.16243841129958,1.18269287843545,0.352071715937262,0.651021924219751,0.629156066554265,0,0,0.316011120628178,2.43270258348197,1.33524244314275,0.129920822977795,0,0.198681354781265,0,0.295379054349154,0.302899349844443,0.0762068066549998,0,0,0,0.233753804363138,0,0,0.0897138566094757,0.335769232728157,0.965947970160952,3.75364950902364,4.2124873581471,1.07184189539533,2.50786052017682,1.12950368523413,1.38097570952153,0.572895513439397,0.68741272937475,0,0,1.35004500046361,0,0,0,14.2188666190322,20.3502685434526,12.6342868258059,6.07766792670735,9.4325923182592,7.53758384645058,8.44537565646138,5.76898160268904,5.45562656306086,4.04315538822076,8.11133759648767,5.47016390019621,6.27398100048212,6.7226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| |||
|short_description=p2@Mad2l2 | |||
}} |
Latest revision as of 17:04, 26 September 2015
Short description: | p2@Mad2l2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Mad2l2_5end |
Coexpression cluster: | MCL_coexpression_mm9:108 |
Association with transcript: | -84bp_to_ENSMUST00000084129_5end |
EntrezGene: | Mad2l2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 4.92e-13 | 44 |
neurectodermal cell | 4.92e-13 | 44 |
neural cell | 1.43e-12 | 43 |
neuron | 2.30e-11 | 33 |
neuronal stem cell | 2.30e-11 | 33 |
neuroblast | 2.30e-11 | 33 |
electrically signaling cell | 2.30e-11 | 33 |
CNS neuron (sensu Vertebrata) | 4.30e-08 | 23 |
neuroblast (sensu Vertebrata) | 4.30e-08 | 23 |
electrically responsive cell | 1.63e-07 | 39 |
electrically active cell | 1.63e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 3.59e-11 | 95 |
ectoderm | 3.59e-11 | 95 |
presumptive ectoderm | 3.59e-11 | 95 |
central nervous system | 4.59e-11 | 73 |
nervous system | 3.65e-10 | 75 |
neurectoderm | 5.18e-10 | 64 |
neural plate | 5.18e-10 | 64 |
presumptive neural plate | 5.18e-10 | 64 |
ecto-epithelium | 5.91e-09 | 73 |
pre-chordal neural plate | 5.12e-07 | 49 |