FFCP PHASE1:Mm9::chr4:57581016..57581032,+: Difference between revisions
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{{FFCP|EntrezGene=242481|HGNC=|MCL_coexpression_id=1804|UniProt=Q8BR92|association_with_transcript=0bp_to_ENSMUST00000102904_5end|description=CAGE_peak_6_at_Palm2_5end|id=chr4:57581016..57581032,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!2.66e-12!18;UBERON:0000948!2.66e-12!18;UBERON:0005498!2.66e-12!18;UBERON:0004140!2.66e-12!18;UBERON:0009881!2.66e-12!18;UBERON:0004141!2.66e-12!18;UBERON:0003084!2.66e-12!18;UBERON:0007005!2.66e-12!18;UBERON:0004139!2.66e-12!18;UBERON:0004291!2.66e-12!18;UBERON:0005157!7.08e-09!27;UBERON:0004535!1.06e-08!23;UBERON:0001009!1.06e-08!23;UBERON:0002048!9.86e-08!14;UBERON:0000117!9.86e-08!14;UBERON:0000171!9.86e-08!14;UBERON:0000170!9.86e-08!14;UBERON:0005597!9.86e-08!14;UBERON:0000118!9.86e-08!14;UBERON:0005153!9.73e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.28e-21,18;UBERON:0000948,1.28e-21,18;UBERON:0005498,1.28e-21,18;UBERON:0004140,1.28e-21,18;UBERON:0009881,1.28e-21,18;UBERON:0004141,1.28e-21,18;UBERON:0003084,1.28e-21,18;UBERON:0007005,1.28e-21,18;UBERON:0004139,1.28e-21,18;UBERON:0004291,1.28e-21,18;UBERON:0004535,7.50e-18,23;UBERON:0001009,7.50e-18,23;UBERON:0002048,1.67e-11,14;UBERON:0000117,1.67e-11,14;UBERON:0000171,1.67e-11,14;UBERON:0000170,1.67e-11,14;UBERON:0005597,1.67e-11,14;UBERON:0000118,1.67e-11,14;UBERON:0004872,1.41e-10,33;UBERON:0005153,7.14e-09,17;UBERON:0005178,7.14e-09,17;UBERON:0005181,7.14e-09,17;UBERON:0002224,7.14e-09,17;UBERON:0000915,7.14e-09,17;UBERON:0008947,7.14e-09,17;UBERON:0003258,7.14e-09,17;UBERON:0005157,4.69e-07,20|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54355661621568,1.43266719969378,1.03134418455488,0,0,0,0,0,0.449949858640699,0,0,0.299600110518405,0,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,1.14918604276669,0.921639199537461,0,0.182975287204819,0,0.558365998002762,0.56276261003168,0,0.589257170947335,0.569486723196412,0.559198337475902,0.075726193333184,0.0755715601067855,0,0.860423876981386,0,0,0,0,0.280888840263504,1.87473354835864,2.59786004602869,1.06001872353102,0,7.69958864485907,5.09610479413291,7.11066703153331,0.216491041011214,0,0,0.22836775943812,0.258937883647172,1.1875371125186,0.867426633830679,1.21786191324856,1.61430848079241,1.95939432718409,1.76383060703557,2.26199864393416,0.247194967734374,4.19338135067744,0.884610551949874,1.29413479957927,0.220841518460394,0.484875253135222,0,0,0,0,0,0,0,0.599162557619291,0.457500602818626,0.251308704225729,0.173824320192276,0.255715457330331,0.41557608911912,0.486723789203273,0.611036183101898,0.746441823660558,0,0.210441855886474,0.520481771850815,0.459804208866946,0.720248519221397,0.452114453507145,0.884474488967262,0.896796041993948,0.281105173679186,0.776110112217047,0.215567992932842,1.32374256117473,1.58356011747554,0.219195732427575,0.556094498451196,1.74126083261083,1.23469281844766,0.59710280045548,0,0,0,4.14251545071004,2.34526059981096,2.88099298337624,4.49814997611899,3.73852040320067,3.08534225774756,2.79040733700489,4.82892122519315,2.91913355917924,1.97471819896177,2.79084688934462,3.40489000092594,1.90059983652932,2.85415149878366,1.34206418760372,0.210289948564127,0,0,0,0.213288250535234,0.928946687441754,0.77320476793256,1.00841762311671,0.667134131534611,0.380451252225118,0.474529061544512,0.494096864172033,0.502670417600539,0.596869416123452,0.779856348476481,0,0.864552199498777,0.199141273254367,0.189667900953082,0.228497025219458,0,0.610953983535943,0.387904974335251,0.420814919341911,0.442655759869801,0.147610147979602,0,0.123397163921801,0,0.500535317148282,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0.252578877947112,0.179397413521912,0,1.29327233116623,0.947457058852424,1.14075483509418,2.37643120085263,1.17345124144251,1.17254380209271,1.19021820443007,1.36593553500459,2.99506773801763,2.6575762757853,2.55127629851979,1.47476983244164,1.72684981865896,1.44649058581512,0,0,0,0.827810238914197,0.481651769963376,0.468846746368813,0.819674726883377,0.252470927204373,0,0.390438744296638,0.646270193198397,0,0,0,0,0,0,0.963963949265421,0.425820255624806,0.35613120733451,0.488660878060728,0.164970122972535,0,0,0,0,0,0.614870295887855,0,0.363533729477506,0,0.316036757935816,0,0,0.340439605753788,0.540183282093931,0.129358683782755,0.214337035031592,0.177340233642274,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0.441056796109924,0.65954501176592,1.77610869365496,0.422190474497091,0.358117032009409,1.14898629821543,0.874442509889552,0.370850604021019,0.170870880797853,0.619160603889667,0.740778109478847,0.188368457004691,0,0,0,0,0,0,0.474503990371703,1.21991680276109,0.756037385752609,0.627264888043406,1.31017538247707,0.269728692769641,0.743881101528023,0.523511883968059,0.259229946583586,0,0.56369293868419,0.598066184175915,0.66183396182839,0.972255941720238,0.9041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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=242481 | |||
|HGNC= | |||
|MCL_coexpression_id=1804 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BR92 | |||
|association_with_transcript=0bp_to_ENSMUST00000102904_5end | |||
|cluster_id=chr4:57581016..57581032,+ | |||
|description=CAGE_peak_6_at_Palm2_5end | |||
|id=chr4:57581016..57581032,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!2.66e-12!18;UBERON:0000948!2.66e-12!18;UBERON:0005498!2.66e-12!18;UBERON:0004140!2.66e-12!18;UBERON:0009881!2.66e-12!18;UBERON:0004141!2.66e-12!18;UBERON:0003084!2.66e-12!18;UBERON:0007005!2.66e-12!18;UBERON:0004139!2.66e-12!18;UBERON:0004291!2.66e-12!18;UBERON:0005157!7.08e-09!27;UBERON:0004535!1.06e-08!23;UBERON:0001009!1.06e-08!23;UBERON:0002048!9.86e-08!14;UBERON:0000117!9.86e-08!14;UBERON:0000171!9.86e-08!14;UBERON:0000170!9.86e-08!14;UBERON:0005597!9.86e-08!14;UBERON:0000118!9.86e-08!14;UBERON:0005153!9.73e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.28e-21,18;UBERON:0000948,1.28e-21,18;UBERON:0005498,1.28e-21,18;UBERON:0004140,1.28e-21,18;UBERON:0009881,1.28e-21,18;UBERON:0004141,1.28e-21,18;UBERON:0003084,1.28e-21,18;UBERON:0007005,1.28e-21,18;UBERON:0004139,1.28e-21,18;UBERON:0004291,1.28e-21,18;UBERON:0004535,7.50e-18,23;UBERON:0001009,7.50e-18,23;UBERON:0002048,1.67e-11,14;UBERON:0000117,1.67e-11,14;UBERON:0000171,1.67e-11,14;UBERON:0000170,1.67e-11,14;UBERON:0005597,1.67e-11,14;UBERON:0000118,1.67e-11,14;UBERON:0004872,1.41e-10,33;UBERON:0005153,7.14e-09,17;UBERON:0005178,7.14e-09,17;UBERON:0005181,7.14e-09,17;UBERON:0002224,7.14e-09,17;UBERON:0000915,7.14e-09,17;UBERON:0008947,7.14e-09,17;UBERON:0003258,7.14e-09,17;UBERON:0005157,4.69e-07,20 | |||
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54355661621568,1.43266719969378,1.03134418455488,0,0,0,0,0,0.449949858640699,0,0,0.299600110518405,0,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,1.14918604276669,0.921639199537461,0,0.182975287204819,0,0.558365998002762,0.56276261003168,0,0.589257170947335,0.569486723196412,0.559198337475902,0.075726193333184,0.0755715601067855,0,0.860423876981386,0,0,0,0,0.280888840263504,1.87473354835864,2.59786004602869,1.06001872353102,0,7.69958864485907,5.09610479413291,7.11066703153331,0.216491041011214,0,0,0.22836775943812,0.258937883647172,1.1875371125186,0.867426633830679,1.21786191324856,1.61430848079241,1.95939432718409,1.76383060703557,2.26199864393416,0.247194967734374,4.19338135067744,0.884610551949874,1.29413479957927,0.220841518460394,0.484875253135222,0,0,0,0,0,0,0,0.599162557619291,0.457500602818626,0.251308704225729,0.173824320192276,0.255715457330331,0.41557608911912,0.486723789203273,0.611036183101898,0.746441823660558,0,0.210441855886474,0.520481771850815,0.459804208866946,0.720248519221397,0.452114453507145,0.884474488967262,0.896796041993948,0.281105173679186,0.776110112217047,0.215567992932842,1.32374256117473,1.58356011747554,0.219195732427575,0.556094498451196,1.74126083261083,1.23469281844766,0.59710280045548,0,0,0,4.14251545071004,2.34526059981096,2.88099298337624,4.49814997611899,3.73852040320067,3.08534225774756,2.79040733700489,4.82892122519315,2.91913355917924,1.97471819896177,2.79084688934462,3.40489000092594,1.90059983652932,2.85415149878366,1.34206418760372,0.210289948564127,0,0,0,0.213288250535234,0.928946687441754,0.77320476793256,1.00841762311671,0.667134131534611,0.380451252225118,0.474529061544512,0.494096864172033,0.502670417600539,0.596869416123452,0.779856348476481,0,0.864552199498777,0.199141273254367,0.189667900953082,0.228497025219458,0,0.610953983535943,0.387904974335251,0.420814919341911,0.442655759869801,0.147610147979602,0,0.123397163921801,0,0.500535317148282,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0.252578877947112,0.179397413521912,0,1.29327233116623,0.947457058852424,1.14075483509418,2.37643120085263,1.17345124144251,1.17254380209271,1.19021820443007,1.36593553500459,2.99506773801763,2.6575762757853,2.55127629851979,1.47476983244164,1.72684981865896,1.44649058581512,0,0,0,0.827810238914197,0.481651769963376,0.468846746368813,0.819674726883377,0.252470927204373,0,0.390438744296638,0.646270193198397,0,0,0,0,0,0,0.963963949265421,0.425820255624806,0.35613120733451,0.488660878060728,0.164970122972535,0,0,0,0,0,0.614870295887855,0,0.363533729477506,0,0.316036757935816,0,0,0.340439605753788,0.540183282093931,0.129358683782755,0.214337035031592,0.177340233642274,0.178368817602071,0.164549020602121,0.304464949114599,0,0,0.441056796109924,0.65954501176592,1.77610869365496,0.422190474497091,0.358117032009409,1.14898629821543,0.874442509889552,0.370850604021019,0.170870880797853,0.619160603889667,0.740778109478847,0.188368457004691,0,0,0,0,0,0,0.474503990371703,1.21991680276109,0.756037385752609,0.627264888043406,1.31017538247707,0.269728692769641,0.743881101528023,0.523511883968059,0.259229946583586,0,0.56369293868419,0.598066184175915,0.66183396182839,0.972255941720238,0.904118764344118,0.844780627453891,0.821500670520278,0.781226309063701,0.629156066554265,0.483168241652012,0,0,0,0.102710957164827,0,0.179026695667481,0,0.120195449519969,0,0.100966449948148,0,0.100826185136841,0,0,0.116876902181569,0,0,0,0,0.772758376128762,0,0,0,0,0.564751842617067,0.920650473014354,0,0,0.685082519770642,0,0.675022500231806,0,0,0,0.415149390336707,2.39414924040619,0.341467211508268,0.486213434136588,0.838452650511929,0.735374033800057,0.888986911206461,0.412070114477788,1.92551525755089,0.758091635291392,1.77435509923168,1.32038438970253,1.31098110457835,1.15245274328765,1.37845125493472,0.952587382566147,0.927074607558844,1.54327376370964,0.412085900803307,1.17759136107518,1.37147700954166,1.59728225543404,0.953744759789284,1.59881058295561,1.78807822789128,1.35383372626682,2.0122077016005,0.526139422875686,1.35804113845862,0.561142271657738,1.18635018124174,1.28055827088233,1.63692417267876,0.464810523557898,1.15743966588685,0.499621155875892,0.935726433781634,1.07435527024149,1.72159498861959,1.10295709559758,0.463735671240843 | |||
|short_description=p6@Palm2 | |||
}} |
Latest revision as of 02:59, 27 September 2015
Short description: | p6@Palm2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Palm2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1804 |
Association with transcript: | 0bp_to_ENSMUST00000102904_5end |
EntrezGene: | Palm2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.28e-21 | 18 |
heart | 1.28e-21 | 18 |
primitive heart tube | 1.28e-21 | 18 |
primary heart field | 1.28e-21 | 18 |
anterior lateral plate mesoderm | 1.28e-21 | 18 |
heart tube | 1.28e-21 | 18 |
heart primordium | 1.28e-21 | 18 |
cardiac mesoderm | 1.28e-21 | 18 |
cardiogenic plate | 1.28e-21 | 18 |
heart rudiment | 1.28e-21 | 18 |
cardiovascular system | 7.50e-18 | 23 |
circulatory system | 7.50e-18 | 23 |
lung | 1.67e-11 | 14 |
respiratory tube | 1.67e-11 | 14 |
respiration organ | 1.67e-11 | 14 |
pair of lungs | 1.67e-11 | 14 |
lung primordium | 1.67e-11 | 14 |
lung bud | 1.67e-11 | 14 |
splanchnic layer of lateral plate mesoderm | 1.41e-10 | 33 |
epithelial bud | 7.14e-09 | 17 |
thoracic cavity element | 7.14e-09 | 17 |
thoracic segment organ | 7.14e-09 | 17 |
thoracic cavity | 7.14e-09 | 17 |
thoracic segment of trunk | 7.14e-09 | 17 |
respiratory primordium | 7.14e-09 | 17 |
endoderm of foregut | 7.14e-09 | 17 |
epithelial fold | 4.69e-07 | 20 |