FFCP PHASE1:Hg19::chr8:53161967..53161974,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9705 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18695 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000518545_5end | |||
|cluster_id=chr8:53161967..53161974,- | |||
|coexpression_cluster_id=C1478 | |||
|description=CAGE_peak_11_at_ST18_5end | |||
|id=chr8:53161967..53161974,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002553;8.62e-12;1!CL:0000167;4.67e-11;1!CL:0000164;4.67e-11;1!CL:0000502;4.67e-11;1!CL:0000172;4.67e-11;1!CL:0000173;4.67e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,8.62e-12,1;CL:0000167,4.91e-11,1;CL:0000164,4.91e-11,1;CL:0000502,4.91e-11,1;CL:0000172,4.91e-11,1;CL:0000173,4.91e-11,1;CL:0002351,4.91e-11,1 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.50e-30;3!CL:0002351;4.67e-11;1 | |||
|ontology_enrichment_disease=DOID:3119!9.51e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:4430;4.67e-11;1!DOID:5409;6.02e-11;4!DOID:4362;5.17e-09;5!DOID:3119;3.59e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,4.91e-11,1;DOID:5409,6.65e-11,4;DOID:4362,5.28e-09,5;DOID:3119,3.59e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.50e-22!57;UBERON:0005068!1.50e-22!57;UBERON:0006241!1.50e-22!57;UBERON:0007135!1.50e-22!57;UBERON:0002616!1.16e-21!59;UBERON:0003296!2.12e-20!4;UBERON:0010133!2.12e-20!4;UBERON:0000955!7.18e-20!69;UBERON:0006238!7.18e-20!69;UBERON:0005743!5.20e-19!86;UBERON:0001017!4.50e-18!82;UBERON:0001894!1.89e-17!7;UBERON:0006222!1.89e-17!7;UBERON:0000073!8.38e-17!94;UBERON:0001016!8.38e-17!94;UBERON:0003075!1.95e-15!86;UBERON:0007284!1.95e-15!86;UBERON:0002346!1.43e-14!90;UBERON:0004733!5.64e-14!12;UBERON:0002028!5.64e-14!12;UBERON:0007277!5.64e-14!12;UBERON:0002780!7.18e-14!41;UBERON:0001890!7.18e-14!41;UBERON:0006240!7.18e-14!41;UBERON:0003080!1.72e-13!42;UBERON:0004732!7.44e-13!13;UBERON:0000153!1.68e-12!129;UBERON:0007811!1.68e-12!129;UBERON:0001905!2.46e-11!2;UBERON:0002757!2.46e-11!2;UBERON:0010134!2.46e-11!2;UBERON:0002784!2.46e-11!2;UBERON:0005408!2.46e-11!2;UBERON:0001899!2.46e-11!2;UBERON:0003076!4.62e-11!15;UBERON:0003057!4.62e-11!15;UBERON:0000007!8.12e-11!2;UBERON:0000033!1.11e-10!123;UBERON:0007023!1.45e-10!115;UBERON:0001954!2.04e-10!2;UBERON:0003022!2.04e-10!2;UBERON:0002421!2.04e-10!2;UBERON:0002600!2.04e-10!2;UBERON:0003056!3.14e-10!61;UBERON:0002680!6.18e-09!9;UBERON:0001895!6.18e-09!9;UBERON:0010092!6.18e-09!9;UBERON:0000349!6.74e-09!5;UBERON:0004121!1.88e-08!169;UBERON:0002037!3.57e-08!6;UBERON:0006215!3.57e-08!6;UBERON:0000924!3.75e-08!173;UBERON:0006601!3.75e-08!173;UBERON:0001896!3.88e-07!3;UBERON:0005290!3.88e-07!3;UBERON:0010096!3.88e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;8.35e-40;4!UBERON:0010133;8.35e-40;4!UBERON:0001894;6.48e-23;7!UBERON:0001905;2.69e-21;2!UBERON:0002757;2.69e-21;2!UBERON:0010134;2.69e-21;2!UBERON:0005408;2.69e-21;2!UBERON:0001899;2.69e-21;2!UBERON:0000007;2.35e-20;2!UBERON:0002037;1.30e-15;6!UBERON:0002784;3.92e-11;4!UBERON:0002680;1.34e-10;9!UBERON:0001895;1.34e-10;9!UBERON:0004733;4.47e-08;12!UBERON:0002028;4.47e-08;12!UBERON:0000002;1.19e-07;6!UBERON:0001560;1.19e-07;6!UBERON:0000073;1.51e-07;53!UBERON:0002616;1.51e-07;53!UBERON:0004732;1.72e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,9.72e-40,4;UBERON:0010133,9.72e-40,4;UBERON:0001894,7.06e-23,7;UBERON:0006222,7.06e-23,7;UBERON:0001905,2.55e-21,2;UBERON:0002757,2.55e-21,2;UBERON:0010134,2.55e-21,2;UBERON:0005408,2.55e-21,2;UBERON:0001899,2.55e-21,2;UBERON:0000007,2.86e-20,2;UBERON:0002037,1.23e-15,6;UBERON:0006215,1.23e-15,6;UBERON:0002784,3.83e-11,4;UBERON:0000073,8.43e-11,53;UBERON:0002616,8.43e-11,53;UBERON:0002680,1.30e-10,9;UBERON:0001895,1.30e-10,9;UBERON:0010092,1.30e-10,9;UBERON:0001049,3.50e-10,56;UBERON:0005068,3.50e-10,56;UBERON:0006241,3.50e-10,56;UBERON:0007135,3.50e-10,56;UBERON:0000955,4.10e-08,68;UBERON:0006238,4.10e-08,68;UBERON:0004733,4.36e-08,12;UBERON:0002028,4.36e-08,12;UBERON:0007277,4.36e-08,12;UBERON:0000002,1.21e-07,6;UBERON:0001560,1.21e-07,6;UBERON:0004732,1.68e-07,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,7.05411693991973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.689486746482929,0.291604613383254,1.73624994933292,0,0,3.05163472634166,3.98085335752409,2.65992857058193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,1.22429104652196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80784592624426,0,0,0,0,0,0,0,0,0,4.11827994868715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443716206147409,0.124192805882767,0.276697269872462,0,0,0,0,0,3.76794674388145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.4159809519932,0,0,0.0642292250964595,0,0,0,0.756215088665154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,3.21421101526972,7.39824188881413,1.21393120847326,1.59363533945908,0,0,0,0.0679697329768317,0,0,0,0,0.471346769748006,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.57333409808316,15.3192096874254,0,0,3.07833446887202,2.41540549706678,0,0,9.87666322359198,0,1.41405928260976,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0.23806443146374,0,0.124149428591716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p11@ST18 | |||
}} |
Latest revision as of 11:18, 18 September 2015
Short description: | p11@ST18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_ST18_5end |
Coexpression cluster: | C1478_nonsmall_smallcell_small_pineal_cerebellum_argyrophil_gastrointestinal |
Association with transcript: | 0bp_to_ENST00000518545_5end |
EntrezGene: | ST18 |
HGNC: | 18695 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 8.62e-12 | 1 |
peptide hormone secreting cell | 4.91e-11 | 1 |
enteroendocrine cell | 4.91e-11 | 1 |
type D enteroendocrine cell | 4.91e-11 | 1 |
somatostatin secreting cell | 4.91e-11 | 1 |
pancreatic D cell | 4.91e-11 | 1 |
progenitor cell of endocrine pancreas | 4.91e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
gland of diencephalon | 9.72e-40 | 4 |
neuroendocrine gland | 9.72e-40 | 4 |
diencephalon | 7.06e-23 | 7 |
future diencephalon | 7.06e-23 | 7 |
pineal body | 2.55e-21 | 2 |
regional part of epithalamus | 2.55e-21 | 2 |
secretory circumventricular organ | 2.55e-21 | 2 |
circumventricular organ | 2.55e-21 | 2 |
epithalamus | 2.55e-21 | 2 |
pituitary gland | 2.86e-20 | 2 |
cerebellum | 1.23e-15 | 6 |
rhombic lip | 1.23e-15 | 6 |
regional part of diencephalon | 3.83e-11 | 4 |
regional part of nervous system | 8.43e-11 | 53 |
regional part of brain | 8.43e-11 | 53 |
regional part of metencephalon | 1.30e-10 | 9 |
metencephalon | 1.30e-10 | 9 |
future metencephalon | 1.30e-10 | 9 |
neural tube | 3.50e-10 | 56 |
neural rod | 3.50e-10 | 56 |
future spinal cord | 3.50e-10 | 56 |
neural keel | 3.50e-10 | 56 |
brain | 4.10e-08 | 68 |
future brain | 4.10e-08 | 68 |
segmental subdivision of hindbrain | 4.36e-08 | 12 |
hindbrain | 4.36e-08 | 12 |
presumptive hindbrain | 4.36e-08 | 12 |
uterine cervix | 1.21e-07 | 6 |
neck of organ | 1.21e-07 | 6 |
segmental subdivision of nervous system | 1.68e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 4.91e-11 | 1 |
lung small cell carcinoma | 6.65e-11 | 4 |
cervical cancer | 5.28e-09 | 5 |
gastrointestinal system cancer | 3.59e-07 | 14 |